RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 TSPY10P0CW01 314 aa29.82■■■□□ 2.36
CDKN3-209ENST00000556102 NCKAP5LQ9HCH0 1330 aa29.81■■■□□ 2.36
CDKN3-209ENST00000556102 TCOF1Q13428 1488 aaKnown RBP29.8■■■□□ 2.36
CDKN3-209ENST00000556102 PKD2Q13563 968 aa29.79■■■□□ 2.36
CDKN3-209ENST00000556102 A2ML1A8K2U0 1454 aa29.79■■■□□ 2.36
CDKN3-209ENST00000556102 MAST1Q9Y2H9 1570 aa29.78■■■□□ 2.36
CDKN3-209ENST00000556102 KANK4Q5T7N3 995 aaPredicted RBP29.78■■■□□ 2.36
CDKN3-209ENST00000556102 PZPP20742 1482 aa29.77■■■□□ 2.36
CDKN3-209ENST00000556102 IQSEC2Q5JU85 1478 aa29.77■■■□□ 2.36
CDKN3-209ENST00000556102 DNMT1P26358 1616 aaKnown RBP29.75■■■□□ 2.35
CDKN3-209ENST00000556102 MYOM3Q5VTT5 1437 aa29.75■■■□□ 2.35
CDKN3-209ENST00000556102 MIA2Q96PC5 1412 aa29.75■■■□□ 2.35
CDKN3-209ENST00000556102 WASHC2CQ9Y4E1 1318 aa29.74■■■□□ 2.35
CDKN3-209ENST00000556102 TNRQ92752 1358 aa29.74■■■□□ 2.35
CDKN3-209ENST00000556102 FBXO31Q5XUX0 539 aaPredicted RBP29.72■■■□□ 2.35
CDKN3-209ENST00000556102 RNF17Q9BXT8 1623 aaKnown RBP29.71■■■□□ 2.35
CDKN3-209ENST00000556102 EIF2AK4Q9P2K8 1649 aaKnown RBP29.68■■■□□ 2.34
CDKN3-209ENST00000556102 ZNF335Q9H4Z2 1342 aaPredicted RBP29.68■■■□□ 2.34
CDKN3-209ENST00000556102 ZC3H13Q5T200 1668 aaKnown RBP29.66■■■□□ 2.34
CDKN3-209ENST00000556102 POLR1AO95602 1720 aaPredicted RBP29.65■■■□□ 2.34
CDKN3-209ENST00000556102 NLRP1Q9C000 1473 aa29.62■■■□□ 2.33
CDKN3-209ENST00000556102 ABCC3O15438 1527 aa29.62■■■□□ 2.33
CDKN3-209ENST00000556102 APLP2Q06481 763 aa29.6■■■□□ 2.33
CDKN3-209ENST00000556102 NEURL4Q96JN8 1562 aa29.6■■■□□ 2.33
CDKN3-209ENST00000556102 MROH1Q8NDA8 1641 aa29.6■■■□□ 2.33
CDKN3-209ENST00000556102 DUOX2Q9NRD8 1548 aa29.59■■■□□ 2.33
CDKN3-209ENST00000556102 CROCC2H7BZ55 1655 aa29.58■■■□□ 2.33
CDKN3-209ENST00000556102 PTPN23Q9H3S7 1636 aa29.57■■■□□ 2.32
CDKN3-209ENST00000556102 UGGT1Q9NYU2 1555 aa29.56■■■□□ 2.32
CDKN3-209ENST00000556102 SHANK2Q9UPX8 1470 aa29.56■■■□□ 2.32
CDKN3-209ENST00000556102 SPATA31D1Q6ZQQ2 1576 aa29.56■■■□□ 2.32
CDKN3-209ENST00000556102 THEMISQ8N1K5 641 aaPredicted RBP29.55■■■□□ 2.32
CDKN3-209ENST00000556102 CEP152O94986 1710 aa29.54■■■□□ 2.32
CDKN3-209ENST00000556102 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.53■■■□□ 2.32
CDKN3-209ENST00000556102 ABCC5O15440 1437 aa29.53■■■□□ 2.32
CDKN3-209ENST00000556102 ANKLE2Q86XL3 938 aa29.52■■■□□ 2.32
CDKN3-209ENST00000556102 KIF15Q9NS87 1388 aa29.52■■■□□ 2.32
CDKN3-209ENST00000556102 ERVK-7P63135 1459 aa29.51■■■□□ 2.31
CDKN3-209ENST00000556102 DEPDC5O75140 1603 aa29.49■■■□□ 2.31
CDKN3-209ENST00000556102 FGD6Q6ZV73 1430 aa29.49■■■□□ 2.31
CDKN3-209ENST00000556102 ERBINQ96RT1 1412 aa29.48■■■□□ 2.31
CDKN3-209ENST00000556102 CFAP65Q6ZU64 1925 aaKnown RBP29.47■■■□□ 2.31
CDKN3-209ENST00000556102 DAPK1P53355 1430 aa29.47■■■□□ 2.31
CDKN3-209ENST00000556102 PRDM15P57071 1507 aaPredicted RBP29.47■■■□□ 2.31
CDKN3-209ENST00000556102 UBAP1LF5GYI3 381 aa29.47■■■□□ 2.31
CDKN3-209ENST00000556102 MED14O60244 1454 aa29.46■■■□□ 2.31
CDKN3-209ENST00000556102 CPS1P31327 1500 aa29.45■■■□□ 2.31
CDKN3-209ENST00000556102 DISP3Q9P2K9 1392 aa29.44■■■□□ 2.3
CDKN3-209ENST00000556102 RRP7BPQ9NSQ0 103 aa29.44■■■□□ 2.3
CDKN3-209ENST00000556102 NPHP4O75161 1426 aaPredicted RBP29.44■■■□□ 2.3
CDKN3-209ENST00000556102 VWDEQ8N2E2 1590 aa29.41■■■□□ 2.3
CDKN3-209ENST00000556102 IQGAP1P46940 1657 aa29.4■■■□□ 2.3
CDKN3-209ENST00000556102 ARHGAP31Q2M1Z3 1444 aa29.4■■■□□ 2.3
CDKN3-209ENST00000556102 UBR1Q8IWV7 1749 aa29.39■■■□□ 2.3
CDKN3-209ENST00000556102 ANKRD30AQ9BXX3 1397 aa29.36■■■□□ 2.29
CDKN3-209ENST00000556102 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.33■■■□□ 2.29
CDKN3-209ENST00000556102 KANK1Q14678 1352 aa29.33■■■□□ 2.29
CDKN3-209ENST00000556102 CHIC2Q9UKJ5 165 aa29.32■■■□□ 2.28
CDKN3-209ENST00000556102 LMTK2Q8IWU2 1503 aa29.29■■■□□ 2.28
CDKN3-209ENST00000556102 SCAF11Q99590 1463 aaKnown RBP29.29■■■□□ 2.28
CDKN3-209ENST00000556102 TOM1O60784 492 aa29.28■■■□□ 2.28
CDKN3-209ENST00000556102 SLIT1O75093 1534 aa29.28■■■□□ 2.28
CDKN3-209ENST00000556102 ARHGAP23Q9P227 1491 aa29.28■■■□□ 2.28
CDKN3-209ENST00000556102 ADGRL2O95490 1459 aa29.27■■■□□ 2.28
CDKN3-209ENST00000556102 STRCP1A6NGW2 1772 aa29.26■■■□□ 2.28
CDKN3-209ENST00000556102 ILDR2Q71H61 639 aa29.26■■■□□ 2.27
CDKN3-209ENST00000556102 PIK3C2BO00750 1634 aa29.25■■■□□ 2.27
CDKN3-209ENST00000556102 SCAF1Q9H7N4 1312 aaKnown RBP29.22■■■□□ 2.27
CDKN3-209ENST00000556102 SYNMO15061 1565 aa29.22■■■□□ 2.27
CDKN3-209ENST00000556102 PIP4K2BP78356 416 aa29.21■■■□□ 2.27
CDKN3-209ENST00000556102 FAM50AQ14320 339 aaKnown RBP29.21■■■□□ 2.27
CDKN3-209ENST00000556102 LTKP29376 864 aa29.2■■■□□ 2.26
CDKN3-209ENST00000556102 TXNDC2Q86VQ3 553 aa29.2■■■□□ 2.26
CDKN3-209ENST00000556102 KDM5AP29375 1690 aaKnown RBP29.2■■■□□ 2.26
CDKN3-209ENST00000556102 EFCAB6Q5THR3 1501 aa29.2■■■□□ 2.26
CDKN3-209ENST00000556102 LRRC7Q96NW7 1537 aa29.2■■■□□ 2.26
CDKN3-209ENST00000556102 ALKQ9UM73 1620 aa29.17■■■□□ 2.26
CDKN3-209ENST00000556102 EID1Q9Y6B2 187 aa29.17■■■□□ 2.26
CDKN3-209ENST00000556102 TMEM2Q9UHN6 1383 aa29.16■■■□□ 2.26
CDKN3-209ENST00000556102 HSPA1LP34931 641 aa29.16■■■□□ 2.26
CDKN3-209ENST00000556102 NOS1P29475 1434 aa29.15■■■□□ 2.26
CDKN3-209ENST00000556102 STAG3Q9UJ98 1225 aa29.15■■■□□ 2.26
CDKN3-209ENST00000556102 ANKRD50Q9ULJ7 1429 aa29.14■■■□□ 2.26
CDKN3-209ENST00000556102 IDI1Q13907 227 aa29.13■■■□□ 2.25
CDKN3-209ENST00000556102 SOCS7O14512 581 aa29.1■■■□□ 2.25
CDKN3-209ENST00000556102 RPRD2Q5VT52 1461 aaKnown RBP29.09■■■□□ 2.25
CDKN3-209ENST00000556102 ADGRB3O60242 1522 aa29.09■■■□□ 2.25
CDKN3-209ENST00000556102 TET3O43151 1660 aa29.06■■■□□ 2.24
CDKN3-209ENST00000556102 SLC52A1Q9NWF4 448 aa29.05■■■□□ 2.24
CDKN3-209ENST00000556102 XIRP1Q702N8 1843 aaKnown RBP29.04■■■□□ 2.24
CDKN3-209ENST00000556102 UNC13BO14795 1591 aa29.03■■■□□ 2.24
CDKN3-209ENST00000556102 MED1Q15648 1581 aaPredicted RBP29.03■■■□□ 2.24
CDKN3-209ENST00000556102 GCC2Q8IWJ2 1684 aa29.02■■■□□ 2.24
CDKN3-209ENST00000556102 ROCK1Q13464 1354 aa28.99■■■□□ 2.23
CDKN3-209ENST00000556102 MYO5BQ9ULV0 1848 aa28.97■■■□□ 2.23
CDKN3-209ENST00000556102 KCNA6P17658 529 aa28.93■■■□□ 2.22
CDKN3-209ENST00000556102 SLC26A8Q96RN1 970 aa28.93■■■□□ 2.22
CDKN3-209ENST00000556102 ZFYVE9O95405 1425 aa28.92■■■□□ 2.22
CDKN3-209ENST00000556102 E9PCH4 1651 aa28.92■■■□□ 2.22
CDKN3-209ENST00000556102 TMEM131LA2VDJ0 1609 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms