RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-208ENST00000556009 TCOF1Q13428 1488 aaKnown RBP28.08■■■□□ 2.09
NPC2-208ENST00000556009 PKD2Q13563 968 aa28.08■■■□□ 2.09
NPC2-208ENST00000556009 MAP3K1Q13233 1512 aa28.08■■■□□ 2.08
NPC2-208ENST00000556009 KDM5DQ9BY66 1539 aa28.08■■■□□ 2.08
NPC2-208ENST00000556009 POLR1AO95602 1720 aaPredicted RBP28.06■■■□□ 2.08
NPC2-208ENST00000556009 A2ML1A8K2U0 1454 aa28.05■■■□□ 2.08
NPC2-208ENST00000556009 IQSEC2Q5JU85 1478 aa28.05■■■□□ 2.08
NPC2-208ENST00000556009 FAM135AQ9P2D6 1515 aa28.05■■■□□ 2.08
NPC2-208ENST00000556009 KANK4Q5T7N3 995 aaPredicted RBP28.03■■■□□ 2.08
NPC2-208ENST00000556009 MAST1Q9Y2H9 1570 aa28.02■■■□□ 2.08
NPC2-208ENST00000556009 PZPP20742 1482 aa28.02■■■□□ 2.08
NPC2-208ENST00000556009 WASHC2CQ9Y4E1 1318 aa28.01■■■□□ 2.07
NPC2-208ENST00000556009 RNF17Q9BXT8 1623 aaKnown RBP28■■■□□ 2.07
NPC2-208ENST00000556009 ZNF335Q9H4Z2 1342 aaPredicted RBP28■■■□□ 2.07
NPC2-208ENST00000556009 FBXO31Q5XUX0 539 aaPredicted RBP27.99■■■□□ 2.07
NPC2-208ENST00000556009 MIA2Q96PC5 1412 aa27.99■■■□□ 2.07
NPC2-208ENST00000556009 NEURL4Q96JN8 1562 aa27.98■■■□□ 2.07
NPC2-208ENST00000556009 TNRQ92752 1358 aa27.97■■■□□ 2.07
NPC2-208ENST00000556009 MYOM3Q5VTT5 1437 aa27.94■■■□□ 2.06
NPC2-208ENST00000556009 EIF2AK4Q9P2K8 1649 aaKnown RBP27.94■■■□□ 2.06
NPC2-208ENST00000556009 ZC3H13Q5T200 1668 aaKnown RBP27.94■■■□□ 2.06
NPC2-208ENST00000556009 MROH1Q8NDA8 1641 aa27.93■■■□□ 2.06
NPC2-208ENST00000556009 CEP152O94986 1710 aa27.92■■■□□ 2.06
NPC2-208ENST00000556009 CROCC2H7BZ55 1655 aa27.91■■■□□ 2.06
NPC2-208ENST00000556009 ABCC3O15438 1527 aa27.9■■■□□ 2.06
NPC2-208ENST00000556009 CFAP65Q6ZU64 1925 aaKnown RBP27.9■■■□□ 2.06
NPC2-208ENST00000556009 SPATA31D1Q6ZQQ2 1576 aa27.86■■■□□ 2.05
NPC2-208ENST00000556009 THEMISQ8N1K5 641 aaPredicted RBP27.86■■■□□ 2.05
NPC2-208ENST00000556009 NLRP1Q9C000 1473 aa27.86■■■□□ 2.05
NPC2-208ENST00000556009 UGGT1Q9NYU2 1555 aa27.84■■■□□ 2.05
NPC2-208ENST00000556009 DISP3Q9P2K9 1392 aa27.84■■■□□ 2.05
NPC2-208ENST00000556009 APLP2Q06481 763 aa27.83■■■□□ 2.05
NPC2-208ENST00000556009 ANKLE2Q86XL3 938 aa27.82■■■□□ 2.04
NPC2-208ENST00000556009 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.82■■■□□ 2.04
NPC2-208ENST00000556009 DEPDC5O75140 1603 aa27.81■■■□□ 2.04
NPC2-208ENST00000556009 PTPN23Q9H3S7 1636 aa27.81■■■□□ 2.04
NPC2-208ENST00000556009 DUOX2Q9NRD8 1548 aa27.79■■■□□ 2.04
NPC2-208ENST00000556009 VWDEQ8N2E2 1590 aa27.78■■■□□ 2.04
NPC2-208ENST00000556009 ERVK-7P63135 1459 aa27.78■■■□□ 2.04
NPC2-208ENST00000556009 IQGAP1P46940 1657 aa27.78■■■□□ 2.04
NPC2-208ENST00000556009 UBAP1LF5GYI3 381 aa27.77■■■□□ 2.04
NPC2-208ENST00000556009 ILDR2Q71H61 639 aa27.77■■■□□ 2.04
NPC2-208ENST00000556009 ABCC5O15440 1437 aa27.76■■■□□ 2.04
NPC2-208ENST00000556009 UBR1Q8IWV7 1749 aa27.76■■■□□ 2.03
NPC2-208ENST00000556009 PRDM15P57071 1507 aaPredicted RBP27.75■■■□□ 2.03
NPC2-208ENST00000556009 STRCP1A6NGW2 1772 aa27.75■■■□□ 2.03
NPC2-208ENST00000556009 MED14O60244 1454 aa27.75■■■□□ 2.03
NPC2-208ENST00000556009 SHANK2Q9UPX8 1470 aa27.75■■■□□ 2.03
NPC2-208ENST00000556009 CPS1P31327 1500 aa27.74■■■□□ 2.03
NPC2-208ENST00000556009 KIF15Q9NS87 1388 aa27.73■■■□□ 2.03
NPC2-208ENST00000556009 NPHP4O75161 1426 aaPredicted RBP27.71■■■□□ 2.03
NPC2-208ENST00000556009 ERBINQ96RT1 1412 aa27.7■■■□□ 2.03
NPC2-208ENST00000556009 RRP7BPQ9NSQ0 103 aa27.7■■■□□ 2.02
NPC2-208ENST00000556009 FGD6Q6ZV73 1430 aa27.68■■■□□ 2.02
NPC2-208ENST00000556009 DAPK1P53355 1430 aa27.67■■■□□ 2.02
NPC2-208ENST00000556009 ARHGAP31Q2M1Z3 1444 aa27.67■■■□□ 2.02
NPC2-208ENST00000556009 ALKQ9UM73 1620 aa27.65■■■□□ 2.02
NPC2-208ENST00000556009 ANKRD30AQ9BXX3 1397 aa27.61■■■□□ 2.01
NPC2-208ENST00000556009 PIK3C2BO00750 1634 aa27.61■■■□□ 2.01
NPC2-208ENST00000556009 TOM1O60784 492 aa27.61■■■□□ 2.01
NPC2-208ENST00000556009 SYNMO15061 1565 aa27.58■■■□□ 2.01
NPC2-208ENST00000556009 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.58■■■□□ 2.01
NPC2-208ENST00000556009 KANK1Q14678 1352 aa27.58■■■□□ 2.01
NPC2-208ENST00000556009 CHIC2Q9UKJ5 165 aa27.57■■■□□ 2
NPC2-208ENST00000556009 ARHGAP23Q9P227 1491 aa27.57■■■□□ 2
NPC2-208ENST00000556009 SLIT1O75093 1534 aa27.57■■■□□ 2
NPC2-208ENST00000556009 SCAF11Q99590 1463 aaKnown RBP27.56■■■□□ 2
NPC2-208ENST00000556009 PIP4K2BP78356 416 aa27.55■■■□□ 2
NPC2-208ENST00000556009 XIRP1Q702N8 1843 aaKnown RBP27.55■■■□□ 2
NPC2-208ENST00000556009 LRRC7Q96NW7 1537 aa27.54■■■□□ 2
NPC2-208ENST00000556009 SCAF1Q9H7N4 1312 aaKnown RBP27.54■■■□□ 2
NPC2-208ENST00000556009 LMTK2Q8IWU2 1503 aa27.52■■■□□ 2
NPC2-208ENST00000556009 SOCS7O14512 581 aa27.52■■■□□ 2
NPC2-208ENST00000556009 LTKP29376 864 aa27.52■■■□□ 2
NPC2-208ENST00000556009 HSPA1LP34931 641 aa27.52■■■□□ 2
NPC2-208ENST00000556009 KDM5AP29375 1690 aaKnown RBP27.52■■■□□ 2
NPC2-208ENST00000556009 TXNDC2Q86VQ3 553 aa27.51■■□□□ 1.99
NPC2-208ENST00000556009 ADGRL2O95490 1459 aa27.5■■□□□ 1.99
NPC2-208ENST00000556009 MED1Q15648 1581 aaPredicted RBP27.49■■□□□ 1.99
NPC2-208ENST00000556009 EFCAB6Q5THR3 1501 aa27.48■■□□□ 1.99
NPC2-208ENST00000556009 EID1Q9Y6B2 187 aa27.48■■□□□ 1.99
NPC2-208ENST00000556009 IDI1Q13907 227 aa27.45■■□□□ 1.98
NPC2-208ENST00000556009 FAM50AQ14320 339 aaKnown RBP27.45■■□□□ 1.98
NPC2-208ENST00000556009 TMEM2Q9UHN6 1383 aa27.45■■□□□ 1.98
NPC2-208ENST00000556009 MYO5BQ9ULV0 1848 aa27.44■■□□□ 1.98
NPC2-208ENST00000556009 STAG3Q9UJ98 1225 aa27.43■■□□□ 1.98
NPC2-208ENST00000556009 NOS1P29475 1434 aa27.41■■□□□ 1.98
NPC2-208ENST00000556009 ANKRD50Q9ULJ7 1429 aa27.4■■□□□ 1.98
NPC2-208ENST00000556009 SLC52A1Q9NWF4 448 aa27.39■■□□□ 1.98
NPC2-208ENST00000556009 ADGRB3O60242 1522 aa27.39■■□□□ 1.98
NPC2-208ENST00000556009 TET3O43151 1660 aa27.36■■□□□ 1.97
NPC2-208ENST00000556009 GCC2Q8IWJ2 1684 aa27.35■■□□□ 1.97
NPC2-208ENST00000556009 RPRD2Q5VT52 1461 aaKnown RBP27.33■■□□□ 1.97
NPC2-208ENST00000556009 UNC13BO14795 1591 aa27.33■■□□□ 1.97
NPC2-208ENST00000556009 SENP3Q9H4L4 574 aaPredicted RBP27.3■■□□□ 1.96
NPC2-208ENST00000556009 KCNA6P17658 529 aa27.29■■□□□ 1.96
NPC2-208ENST00000556009 E9PCH4 1651 aa27.27■■□□□ 1.96
NPC2-208ENST00000556009 ROCK1Q13464 1354 aa27.27■■□□□ 1.96
NPC2-208ENST00000556009 NWD1Q149M9 1564 aa27.26■■□□□ 1.96
NPC2-208ENST00000556009 TMEM131LA2VDJ0 1609 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms