RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 RNF17Q9BXT8 1623 aaKnown RBP31.25■■■□□ 2.59
PRKCH-219ENST00000555906 LTBP4Q8N2S1 1624 aa31.24■■■□□ 2.59
PRKCH-219ENST00000555906 EIF2AK4Q9P2K8 1649 aaKnown RBP31.24■■■□□ 2.59
PRKCH-219ENST00000555906 PZPP20742 1482 aa31.23■■■□□ 2.59
PRKCH-219ENST00000555906 KIF3BO15066 747 aa31.22■■■□□ 2.59
PRKCH-219ENST00000555906 KANK4Q5T7N3 995 aaPredicted RBP31.22■■■□□ 2.59
PRKCH-219ENST00000555906 A2ML1A8K2U0 1454 aa31.21■■■□□ 2.59
PRKCH-219ENST00000555906 ZC3H13Q5T200 1668 aaKnown RBP31.21■■■□□ 2.59
PRKCH-219ENST00000555906 TCOF1Q13428 1488 aaKnown RBP31.21■■■□□ 2.59
PRKCH-219ENST00000555906 TSPY4P0CV99 314 aa31.2■■■□□ 2.59
PRKCH-219ENST00000555906 TSPY10P0CW01 314 aa31.2■■■□□ 2.59
PRKCH-219ENST00000555906 DNMT1P26358 1616 aaKnown RBP31.2■■■□□ 2.58
PRKCH-219ENST00000555906 CROCC2H7BZ55 1655 aa31.19■■■□□ 2.58
PRKCH-219ENST00000555906 IQSEC2Q5JU85 1478 aa31.17■■■□□ 2.58
PRKCH-219ENST00000555906 POLR1AO95602 1720 aaPredicted RBP31.15■■■□□ 2.58
PRKCH-219ENST00000555906 TNRQ92752 1358 aa31.13■■■□□ 2.57
PRKCH-219ENST00000555906 PKD2Q13563 968 aa31.11■■■□□ 2.57
PRKCH-219ENST00000555906 MROH1Q8NDA8 1641 aa31.11■■■□□ 2.57
PRKCH-219ENST00000555906 PTPN23Q9H3S7 1636 aa31.11■■■□□ 2.57
PRKCH-219ENST00000555906 SHANK2Q9UPX8 1470 aa31.11■■■□□ 2.57
PRKCH-219ENST00000555906 ABCC3O15438 1527 aa31.1■■■□□ 2.57
PRKCH-219ENST00000555906 NCKAP5LQ9HCH0 1330 aa31.1■■■□□ 2.57
PRKCH-219ENST00000555906 WASHC2CQ9Y4E1 1318 aa31.1■■■□□ 2.57
PRKCH-219ENST00000555906 DUOX2Q9NRD8 1548 aa31.08■■■□□ 2.57
PRKCH-219ENST00000555906 NLRP1Q9C000 1473 aa31.07■■■□□ 2.56
PRKCH-219ENST00000555906 CEP152O94986 1710 aa31.04■■■□□ 2.56
PRKCH-219ENST00000555906 FBXO31Q5XUX0 539 aaPredicted RBP31.04■■■□□ 2.56
PRKCH-219ENST00000555906 NEURL4Q96JN8 1562 aa31.04■■■□□ 2.56
PRKCH-219ENST00000555906 SPATA31D1Q6ZQQ2 1576 aa31.03■■■□□ 2.56
PRKCH-219ENST00000555906 APLP2Q06481 763 aa31.02■■■□□ 2.56
PRKCH-219ENST00000555906 PRDM15P57071 1507 aaPredicted RBP31.01■■■□□ 2.55
PRKCH-219ENST00000555906 FGD6Q6ZV73 1430 aa30.99■■■□□ 2.55
PRKCH-219ENST00000555906 UGGT1Q9NYU2 1555 aa30.99■■■□□ 2.55
PRKCH-219ENST00000555906 ABCC5O15440 1437 aa30.98■■■□□ 2.55
PRKCH-219ENST00000555906 ERBINQ96RT1 1412 aa30.98■■■□□ 2.55
PRKCH-219ENST00000555906 ZNF335Q9H4Z2 1342 aaPredicted RBP30.98■■■□□ 2.55
PRKCH-219ENST00000555906 KIF15Q9NS87 1388 aa30.96■■■□□ 2.55
PRKCH-219ENST00000555906 DEPDC5O75140 1603 aa30.96■■■□□ 2.55
PRKCH-219ENST00000555906 DAPK1P53355 1430 aa30.96■■■□□ 2.55
PRKCH-219ENST00000555906 ERVK-7P63135 1459 aa30.95■■■□□ 2.55
PRKCH-219ENST00000555906 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.88■■■□□ 2.53
PRKCH-219ENST00000555906 MED14O60244 1454 aa30.88■■■□□ 2.53
PRKCH-219ENST00000555906 CFAP65Q6ZU64 1925 aaKnown RBP30.86■■■□□ 2.53
PRKCH-219ENST00000555906 THEMISQ8N1K5 641 aaPredicted RBP30.86■■■□□ 2.53
PRKCH-219ENST00000555906 CPS1P31327 1500 aa30.86■■■□□ 2.53
PRKCH-219ENST00000555906 IQGAP1P46940 1657 aa30.86■■■□□ 2.53
PRKCH-219ENST00000555906 UBR1Q8IWV7 1749 aa30.86■■■□□ 2.53
PRKCH-219ENST00000555906 ARHGAP31Q2M1Z3 1444 aa30.85■■■□□ 2.53
PRKCH-219ENST00000555906 VWDEQ8N2E2 1590 aa30.83■■■□□ 2.53
PRKCH-219ENST00000555906 ANKLE2Q86XL3 938 aa30.82■■■□□ 2.52
PRKCH-219ENST00000555906 NPHP4O75161 1426 aaPredicted RBP30.81■■■□□ 2.52
PRKCH-219ENST00000555906 RRP7BPQ9NSQ0 103 aa30.8■■■□□ 2.52
PRKCH-219ENST00000555906 ANKRD30AQ9BXX3 1397 aa30.79■■■□□ 2.52
PRKCH-219ENST00000555906 ADGRL2O95490 1459 aa30.79■■■□□ 2.52
PRKCH-219ENST00000555906 LMTK2Q8IWU2 1503 aa30.78■■■□□ 2.52
PRKCH-219ENST00000555906 KANK1Q14678 1352 aa30.74■■■□□ 2.51
PRKCH-219ENST00000555906 UBAP1LF5GYI3 381 aa30.72■■■□□ 2.51
PRKCH-219ENST00000555906 SLIT1O75093 1534 aa30.72■■■□□ 2.51
PRKCH-219ENST00000555906 KDM5AP29375 1690 aaKnown RBP30.71■■■□□ 2.51
PRKCH-219ENST00000555906 PIK3C2BO00750 1634 aa30.71■■■□□ 2.51
PRKCH-219ENST00000555906 ARHGAP23Q9P227 1491 aa30.7■■■□□ 2.51
PRKCH-219ENST00000555906 EFCAB6Q5THR3 1501 aa30.7■■■□□ 2.51
PRKCH-219ENST00000555906 SYNMO15061 1565 aa30.7■■■□□ 2.5
PRKCH-219ENST00000555906 SCAF11Q99590 1463 aaKnown RBP30.69■■■□□ 2.5
PRKCH-219ENST00000555906 CHIC2Q9UKJ5 165 aa30.68■■■□□ 2.5
PRKCH-219ENST00000555906 STRCP1A6NGW2 1772 aa30.67■■■□□ 2.5
PRKCH-219ENST00000555906 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.65■■■□□ 2.5
PRKCH-219ENST00000555906 DISP3Q9P2K9 1392 aa30.64■■■□□ 2.5
PRKCH-219ENST00000555906 FAM50AQ14320 339 aaKnown RBP30.6■■■□□ 2.49
PRKCH-219ENST00000555906 ANKRD50Q9ULJ7 1429 aa30.59■■■□□ 2.49
PRKCH-219ENST00000555906 NOS1P29475 1434 aa30.57■■■□□ 2.48
PRKCH-219ENST00000555906 TET3O43151 1660 aa30.57■■■□□ 2.48
PRKCH-219ENST00000555906 ALKQ9UM73 1620 aa30.56■■■□□ 2.48
PRKCH-219ENST00000555906 UNC13BO14795 1591 aa30.56■■■□□ 2.48
PRKCH-219ENST00000555906 ADGRB3O60242 1522 aa30.56■■■□□ 2.48
PRKCH-219ENST00000555906 RPRD2Q5VT52 1461 aaKnown RBP30.56■■■□□ 2.48
PRKCH-219ENST00000555906 LRRC7Q96NW7 1537 aa30.55■■■□□ 2.48
PRKCH-219ENST00000555906 GCC2Q8IWJ2 1684 aa30.54■■■□□ 2.48
PRKCH-219ENST00000555906 TMEM2Q9UHN6 1383 aa30.54■■■□□ 2.48
PRKCH-219ENST00000555906 TOM1O60784 492 aa30.53■■■□□ 2.48
PRKCH-219ENST00000555906 LTKP29376 864 aa30.51■■■□□ 2.47
PRKCH-219ENST00000555906 TXNDC2Q86VQ3 553 aa30.49■■■□□ 2.47
PRKCH-219ENST00000555906 EID1Q9Y6B2 187 aa30.48■■■□□ 2.47
PRKCH-219ENST00000555906 ROCK1Q13464 1354 aa30.46■■■□□ 2.47
PRKCH-219ENST00000555906 XIRP1Q702N8 1843 aaKnown RBP30.46■■■□□ 2.47
PRKCH-219ENST00000555906 STAG3Q9UJ98 1225 aa30.46■■■□□ 2.47
PRKCH-219ENST00000555906 SCAF1Q9H7N4 1312 aaKnown RBP30.46■■■□□ 2.47
PRKCH-219ENST00000555906 IDI1Q13907 227 aa30.45■■■□□ 2.47
PRKCH-219ENST00000555906 PIP4K2BP78356 416 aa30.44■■■□□ 2.46
PRKCH-219ENST00000555906 IQGAP3Q86VI3 1631 aa30.43■■■□□ 2.46
PRKCH-219ENST00000555906 MYO5BQ9ULV0 1848 aa30.43■■■□□ 2.46
PRKCH-219ENST00000555906 ILDR2Q71H61 639 aa30.41■■■□□ 2.46
PRKCH-219ENST00000555906 E9PCH4 1651 aa30.4■■■□□ 2.46
PRKCH-219ENST00000555906 SLC52A1Q9NWF4 448 aa30.4■■■□□ 2.46
PRKCH-219ENST00000555906 HSPA1LP34931 641 aa30.39■■■□□ 2.46
PRKCH-219ENST00000555906 MED1Q15648 1581 aaPredicted RBP30.37■■■□□ 2.45
PRKCH-219ENST00000555906 TMEM131LA2VDJ0 1609 aa30.36■■■□□ 2.45
PRKCH-219ENST00000555906 NWD1Q149M9 1564 aa30.36■■■□□ 2.45
PRKCH-219ENST00000555906 ZFYVE9O95405 1425 aa30.32■■■□□ 2.44
PRKCH-219ENST00000555906 NKTRP30414 1462 aaKnown RBP30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms