RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 GGT6Q6P531 493 aa14.94□□□□□ -0.02
ACTN1-215ENST00000555616 DUOX2Q9NRD8 1548 aa14.93□□□□□ -0.02
ACTN1-215ENST00000555616 HSPA2P54652 639 aa14.93□□□□□ -0.02
ACTN1-215ENST00000555616 PTPRKQ15262 1439 aa14.92□□□□□ -0.02
ACTN1-215ENST00000555616 KIF3BO15066 747 aa14.92□□□□□ -0.02
ACTN1-215ENST00000555616 MROH1Q8NDA8 1641 aa14.91□□□□□ -0.02
ACTN1-215ENST00000555616 MYO3AQ8NEV4 1616 aa14.91□□□□□ -0.02
ACTN1-215ENST00000555616 ERBINQ96RT1 1412 aa14.91□□□□□ -0.02
ACTN1-215ENST00000555616 KIF15Q9NS87 1388 aa14.9□□□□□ -0.02
ACTN1-215ENST00000555616 ZNF142P52746 1687 aaPredicted RBP14.9□□□□□ -0.02
ACTN1-215ENST00000555616 ZC3H13Q5T200 1668 aaKnown RBP14.9□□□□□ -0.02
ACTN1-215ENST00000555616 PZPP20742 1482 aa14.89□□□□□ -0.03
ACTN1-215ENST00000555616 SETD1BQ9UPS6 1966 aaKnown RBP14.89□□□□□ -0.03
ACTN1-215ENST00000555616 ADGRL2O95490 1459 aa14.89□□□□□ -0.03
ACTN1-215ENST00000555616 ABCC3O15438 1527 aa14.88□□□□□ -0.03
ACTN1-215ENST00000555616 PRDM15P57071 1507 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-215ENST00000555616 CEP170BQ9Y4F5 1589 aaPredicted RBP14.86□□□□□ -0.03
ACTN1-215ENST00000555616 ANKRD30AQ9BXX3 1397 aa14.85□□□□□ -0.03
ACTN1-215ENST00000555616 DEPDC5O75140 1603 aa14.85□□□□□ -0.03
ACTN1-215ENST00000555616 WASHC2CQ9Y4E1 1318 aa14.85□□□□□ -0.03
ACTN1-215ENST00000555616 NCOA1Q15788 1441 aa14.84□□□□□ -0.03
ACTN1-215ENST00000555616 STRCQ7RTU9 1775 aa14.84□□□□□ -0.03
ACTN1-215ENST00000555616 RRP7BPQ9NSQ0 103 aa14.82□□□□□ -0.04
ACTN1-215ENST00000555616 TNRQ92752 1358 aa14.82□□□□□ -0.04
ACTN1-215ENST00000555616 A2ML1A8K2U0 1454 aa14.82□□□□□ -0.04
ACTN1-215ENST00000555616 PLA2R1Q13018 1463 aa14.82□□□□□ -0.04
ACTN1-215ENST00000555616 CAMSAP1Q5T5Y3 1602 aa14.81□□□□□ -0.04
ACTN1-215ENST00000555616 FAM50AQ14320 339 aaKnown RBP14.81□□□□□ -0.04
ACTN1-215ENST00000555616 SPATA31D1Q6ZQQ2 1576 aa14.81□□□□□ -0.04
ACTN1-215ENST00000555616 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.8□□□□□ -0.04
ACTN1-215ENST00000555616 PTPRTO14522 1441 aa14.8□□□□□ -0.04
ACTN1-215ENST00000555616 VWDEQ8N2E2 1590 aa14.8□□□□□ -0.04
ACTN1-215ENST00000555616 CEP152O94986 1710 aa14.8□□□□□ -0.04
ACTN1-215ENST00000555616 ERVK-7P63135 1459 aa14.79□□□□□ -0.04
ACTN1-215ENST00000555616 NLRP1Q9C000 1473 aa14.79□□□□□ -0.04
ACTN1-215ENST00000555616 LMTK2Q8IWU2 1503 aa14.78□□□□□ -0.04
ACTN1-215ENST00000555616 ARHGAP31Q2M1Z3 1444 aa14.78□□□□□ -0.04
ACTN1-215ENST00000555616 FBXO31Q5XUX0 539 aaPredicted RBP14.78□□□□□ -0.04
ACTN1-215ENST00000555616 CHIC2Q9UKJ5 165 aa14.78□□□□□ -0.04
ACTN1-215ENST00000555616 DMRT2Q9Y5R5 561 aa14.77□□□□□ -0.05
ACTN1-215ENST00000555616 ANKRD50Q9ULJ7 1429 aa14.76□□□□□ -0.05
ACTN1-215ENST00000555616 ROCK1Q13464 1354 aa14.76□□□□□ -0.05
ACTN1-215ENST00000555616 KANK1Q14678 1352 aa14.74□□□□□ -0.05
ACTN1-215ENST00000555616 RRBP1Q9P2E9 1410 aaKnown RBP14.74□□□□□ -0.05
ACTN1-215ENST00000555616 EFCAB6Q5THR3 1501 aa14.73□□□□□ -0.05
ACTN1-215ENST00000555616 UNC13BO14795 1591 aa14.73□□□□□ -0.05
ACTN1-215ENST00000555616 PPARGC1BQ86YN6 1023 aaKnown RBP14.72□□□□□ -0.05
ACTN1-215ENST00000555616 UGGT1Q9NYU2 1555 aa14.72□□□□□ -0.05
ACTN1-215ENST00000555616 PKD2Q13563 968 aa14.71□□□□□ -0.05
ACTN1-215ENST00000555616 CERKQ8TCT0 537 aa14.71□□□□□ -0.05
ACTN1-215ENST00000555616 IQSEC2Q5JU85 1478 aa14.7□□□□□ -0.06
ACTN1-215ENST00000555616 NEURL4Q96JN8 1562 aa14.7□□□□□ -0.06
ACTN1-215ENST00000555616 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.69□□□□□ -0.061e-6■□□□□ 10.8
ACTN1-215ENST00000555616 POLR1AO95602 1720 aaPredicted RBP14.69□□□□□ -0.06
ACTN1-215ENST00000555616 NCKAP5LQ9HCH0 1330 aa14.68□□□□□ -0.06
ACTN1-215ENST00000555616 LTBP4Q8N2S1 1624 aa14.68□□□□□ -0.06
ACTN1-215ENST00000555616 RPRD2Q5VT52 1461 aaKnown RBP14.68□□□□□ -0.06
ACTN1-215ENST00000555616 TET3O43151 1660 aa14.67□□□□□ -0.06
ACTN1-215ENST00000555616 NOS1P29475 1434 aa14.66□□□□□ -0.06
ACTN1-215ENST00000555616 UBR1Q8IWV7 1749 aa14.66□□□□□ -0.06
ACTN1-215ENST00000555616 SYNMO15061 1565 aa14.66□□□□□ -0.06
ACTN1-215ENST00000555616 THEMISQ8N1K5 641 aaPredicted RBP14.66□□□□□ -0.06
ACTN1-215ENST00000555616 MED14O60244 1454 aa14.65□□□□□ -0.06
ACTN1-215ENST00000555616 IQGAP3Q86VI3 1631 aa14.65□□□□□ -0.06
ACTN1-215ENST00000555616 KDM5AP29375 1690 aaKnown RBP14.64□□□□□ -0.07
ACTN1-215ENST00000555616 GCC2Q8IWJ2 1684 aa14.64□□□□□ -0.07
ACTN1-215ENST00000555616 ARHGAP23Q9P227 1491 aa14.63□□□□□ -0.07
ACTN1-215ENST00000555616 PIK3C2BO00750 1634 aa14.63□□□□□ -0.07
ACTN1-215ENST00000555616 SLIT1O75093 1534 aa14.63□□□□□ -0.07
ACTN1-215ENST00000555616 ITGAEP38570 1179 aa14.62□□□□□ -0.07
ACTN1-215ENST00000555616 NPHP4O75161 1426 aaPredicted RBP14.61□□□□□ -0.07
ACTN1-215ENST00000555616 ANKLE2Q86XL3 938 aa14.61□□□□□ -0.07
ACTN1-215ENST00000555616 ADGRB3O60242 1522 aa14.61□□□□□ -0.07
ACTN1-215ENST00000555616 SCAF11Q99590 1463 aaKnown RBP14.6□□□□□ -0.07
ACTN1-215ENST00000555616 IQGAP1P46940 1657 aa14.6□□□□□ -0.07
ACTN1-215ENST00000555616 ZNF335Q9H4Z2 1342 aaPredicted RBP14.6□□□□□ -0.07
ACTN1-215ENST00000555616 NAIPQ13075 1403 aa14.59□□□□□ -0.07
ACTN1-215ENST00000555616 E9PCH4 1651 aa14.58□□□□□ -0.07
ACTN1-215ENST00000555616 TMEM2Q9UHN6 1383 aa14.58□□□□□ -0.08
ACTN1-215ENST00000555616 HFM1A2PYH4 1435 aa14.58□□□□□ -0.08
ACTN1-215ENST00000555616 NUP155O75694 1391 aa14.57□□□□□ -0.08
ACTN1-215ENST00000555616 CFAP65Q6ZU64 1925 aaKnown RBP14.56□□□□□ -0.08
ACTN1-215ENST00000555616 IDI1Q13907 227 aa14.56□□□□□ -0.08
ACTN1-215ENST00000555616 SLC52A1Q9NWF4 448 aa14.56□□□□□ -0.08
ACTN1-215ENST00000555616 CPS1P31327 1500 aa14.56□□□□□ -0.08
ACTN1-215ENST00000555616 TMEM131LA2VDJ0 1609 aa14.52□□□□□ -0.08
ACTN1-215ENST00000555616 LTKP29376 864 aa14.52□□□□□ -0.09
ACTN1-215ENST00000555616 STAG3Q9UJ98 1225 aa14.51□□□□□ -0.09
ACTN1-215ENST00000555616 ZFYVE9O95405 1425 aa14.5□□□□□ -0.09
ACTN1-215ENST00000555616 TXNDC2Q86VQ3 553 aa14.5□□□□□ -0.09
ACTN1-215ENST00000555616 EID1Q9Y6B2 187 aa14.5□□□□□ -0.09
ACTN1-215ENST00000555616 SPHKAPQ2M3C7 1700 aa14.49□□□□□ -0.09
ACTN1-215ENST00000555616 TRIM26Q12899 539 aaPredicted RBP14.48□□□□□ -0.09
ACTN1-215ENST00000555616 TRPM2O94759 1503 aa14.47□□□□□ -0.09
ACTN1-215ENST00000555616 STRCP1A6NGW2 1772 aa14.47□□□□□ -0.09
ACTN1-215ENST00000555616 RIMS2Q9UQ26 1411 aa14.46□□□□□ -0.09
ACTN1-215ENST00000555616 MYO5BQ9ULV0 1848 aa14.45□□□□□ -0.1
ACTN1-215ENST00000555616 LRRC7Q96NW7 1537 aa14.45□□□□□ -0.1
ACTN1-215ENST00000555616 PLEKHG1Q9ULL1 1385 aa14.45□□□□□ -0.1
ACTN1-215ENST00000555616 NWD1Q149M9 1564 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms