RNA–Protein interactions for RNA: ENST00000555215.5

HNRNPC-218, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-218ENST00000555215 RSPH4AQ5TD94 716 aa16.06■□□□□ 0.16
HNRNPC-218ENST00000555215 ILDR2Q71H61 639 aa16.06■□□□□ 0.16
HNRNPC-218ENST00000555215 A2ML1A8K2U0 1454 aa16.05■□□□□ 0.16
HNRNPC-218ENST00000555215 TNRQ92752 1358 aa16.05■□□□□ 0.16
HNRNPC-218ENST00000555215 WASHC2CQ9Y4E1 1318 aa16.05■□□□□ 0.16
HNRNPC-218ENST00000555215 DNMT1P26358 1616 aaKnown RBP16.05■□□□□ 0.16
HNRNPC-218ENST00000555215 ARHGEF5Q12774 1597 aa16.04■□□□□ 0.16
HNRNPC-218ENST00000555215 TSPY4P0CV99 314 aa16.03■□□□□ 0.16
HNRNPC-218ENST00000555215 TSPY10P0CW01 314 aa16.03■□□□□ 0.16
HNRNPC-218ENST00000555215 PZPP20742 1482 aa16.03■□□□□ 0.16
HNRNPC-218ENST00000555215 KDM5DQ9BY66 1539 aa16.02■□□□□ 0.15
HNRNPC-218ENST00000555215 DISP3Q9P2K9 1392 aa16.01■□□□□ 0.15
HNRNPC-218ENST00000555215 IQSEC2Q5JU85 1478 aa16.01■□□□□ 0.15
HNRNPC-218ENST00000555215 MIA2Q96PC5 1412 aa16■□□□□ 0.15
HNRNPC-218ENST00000555215 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16■□□□□ 0.152e-10■□□□□ 8.9
HNRNPC-218ENST00000555215 UBAP1LF5GYI3 381 aa15.99■□□□□ 0.15
HNRNPC-218ENST00000555215 NEURL4Q96JN8 1562 aa15.99■□□□□ 0.15
HNRNPC-218ENST00000555215 MYOM3Q5VTT5 1437 aa15.98■□□□□ 0.15
HNRNPC-218ENST00000555215 MAP3K1Q13233 1512 aa15.97■□□□□ 0.15
HNRNPC-218ENST00000555215 MAST1Q9Y2H9 1570 aa15.96■□□□□ 0.15
HNRNPC-218ENST00000555215 ABCC3O15438 1527 aa15.96■□□□□ 0.15
HNRNPC-218ENST00000555215 MROH1Q8NDA8 1641 aa15.95■□□□□ 0.14
HNRNPC-218ENST00000555215 FAM135AQ9P2D6 1515 aa15.94■□□□□ 0.14
HNRNPC-218ENST00000555215 ANKLE2Q86XL3 938 aa15.94■□□□□ 0.14
HNRNPC-218ENST00000555215 THEMISQ8N1K5 641 aaPredicted RBP15.94■□□□□ 0.14
HNRNPC-218ENST00000555215 RNF17Q9BXT8 1623 aaKnown RBP15.94■□□□□ 0.14
HNRNPC-218ENST00000555215 ABCC5O15440 1437 aa15.93■□□□□ 0.14
HNRNPC-218ENST00000555215 NLRP1Q9C000 1473 aa15.92■□□□□ 0.14
HNRNPC-218ENST00000555215 UGGT1Q9NYU2 1555 aa15.92■□□□□ 0.14
HNRNPC-218ENST00000555215 SHANK2Q9UPX8 1470 aa15.91■□□□□ 0.14
HNRNPC-218ENST00000555215 RRP7BPQ9NSQ0 103 aa15.91■□□□□ 0.14
HNRNPC-218ENST00000555215 POLR1AO95602 1720 aaPredicted RBP15.91■□□□□ 0.14
HNRNPC-218ENST00000555215 ERVK-7P63135 1459 aa15.91■□□□□ 0.14
HNRNPC-218ENST00000555215 CFAP65Q6ZU64 1925 aaKnown RBP15.9■□□□□ 0.14
HNRNPC-218ENST00000555215 NPHP4O75161 1426 aaPredicted RBP15.9■□□□□ 0.14
HNRNPC-218ENST00000555215 SPATA31D1Q6ZQQ2 1576 aa15.9■□□□□ 0.14
HNRNPC-218ENST00000555215 VWDEQ8N2E2 1590 aa15.9■□□□□ 0.14
HNRNPC-218ENST00000555215 KIF15Q9NS87 1388 aa15.88■□□□□ 0.13
HNRNPC-218ENST00000555215 PIP4K2BP78356 416 aa15.88■□□□□ 0.13
HNRNPC-218ENST00000555215 MED14O60244 1454 aa15.88■□□□□ 0.13
HNRNPC-218ENST00000555215 CEP152O94986 1710 aa15.88■□□□□ 0.13
HNRNPC-218ENST00000555215 EIF2AK4Q9P2K8 1649 aaKnown RBP15.87■□□□□ 0.13
HNRNPC-218ENST00000555215 HSPA1LP34931 641 aa15.87■□□□□ 0.13
HNRNPC-218ENST00000555215 CHIC2Q9UKJ5 165 aa15.87■□□□□ 0.13
HNRNPC-218ENST00000555215 DUOX2Q9NRD8 1548 aa15.87■□□□□ 0.13
HNRNPC-218ENST00000555215 LTKP29376 864 aa15.86■□□□□ 0.13
HNRNPC-218ENST00000555215 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.86■□□□□ 0.131e-8■□□□□ 11
HNRNPC-218ENST00000555215 ALKQ9UM73 1620 aa15.86■□□□□ 0.13
HNRNPC-218ENST00000555215 SOCS7O14512 581 aa15.85■□□□□ 0.13
HNRNPC-218ENST00000555215 PTPN23Q9H3S7 1636 aa15.85■□□□□ 0.13
HNRNPC-218ENST00000555215 SCAF1Q9H7N4 1312 aaKnown RBP15.85■□□□□ 0.13
HNRNPC-218ENST00000555215 DAPK1P53355 1430 aa15.85■□□□□ 0.13
HNRNPC-218ENST00000555215 CPS1P31327 1500 aa15.84■□□□□ 0.13
HNRNPC-218ENST00000555215 DEPDC5O75140 1603 aa15.84■□□□□ 0.13
HNRNPC-218ENST00000555215 STRCP1A6NGW2 1772 aa15.84■□□□□ 0.13
HNRNPC-218ENST00000555215 FGD6Q6ZV73 1430 aa15.84■□□□□ 0.13
HNRNPC-218ENST00000555215 ZC3H13Q5T200 1668 aaKnown RBP15.83■□□□□ 0.13
HNRNPC-218ENST00000555215 APLP2Q06481 763 aa15.82■□□□□ 0.12
HNRNPC-218ENST00000555215 CROCC2H7BZ55 1655 aa15.81■□□□□ 0.12
HNRNPC-218ENST00000555215 TOM1O60784 492 aa15.81■□□□□ 0.12
HNRNPC-218ENST00000555215 PRDM15P57071 1507 aaPredicted RBP15.81■□□□□ 0.12
HNRNPC-218ENST00000555215 ARHGAP31Q2M1Z3 1444 aa15.81■□□□□ 0.12
HNRNPC-218ENST00000555215 UBR1Q8IWV7 1749 aa15.81■□□□□ 0.12
HNRNPC-218ENST00000555215 ERBINQ96RT1 1412 aa15.81■□□□□ 0.12
HNRNPC-218ENST00000555215 IQGAP1P46940 1657 aa15.8■□□□□ 0.12
HNRNPC-218ENST00000555215 TXNDC2Q86VQ3 553 aa15.8■□□□□ 0.12
HNRNPC-218ENST00000555215 LRRC7Q96NW7 1537 aa15.79■□□□□ 0.12
HNRNPC-218ENST00000555215 ARHGAP23Q9P227 1491 aa15.79■□□□□ 0.12
HNRNPC-218ENST00000555215 IDI1Q13907 227 aa15.78■□□□□ 0.12
HNRNPC-218ENST00000555215 SENP3Q9H4L4 574 aaPredicted RBP15.78■□□□□ 0.12
HNRNPC-218ENST00000555215 SCAF11Q99590 1463 aaKnown RBP15.78■□□□□ 0.12
HNRNPC-218ENST00000555215 SLIT1O75093 1534 aa15.76■□□□□ 0.11
HNRNPC-218ENST00000555215 ANKRD30AQ9BXX3 1397 aa15.75■□□□□ 0.11
HNRNPC-218ENST00000555215 PIK3C2BO00750 1634 aa15.75■□□□□ 0.11
HNRNPC-218ENST00000555215 FAM50AQ14320 339 aaKnown RBP15.74■□□□□ 0.11
HNRNPC-218ENST00000555215 TMEM2Q9UHN6 1383 aa15.74■□□□□ 0.11
HNRNPC-218ENST00000555215 KANK1Q14678 1352 aa15.73■□□□□ 0.11
HNRNPC-218ENST00000555215 LMTK2Q8IWU2 1503 aa15.73■□□□□ 0.11
HNRNPC-218ENST00000555215 SYNMO15061 1565 aa15.72■□□□□ 0.11
HNRNPC-218ENST00000555215 NOS1P29475 1434 aa15.71■□□□□ 0.11
HNRNPC-218ENST00000555215 ADGRL2O95490 1459 aa15.71■□□□□ 0.1
HNRNPC-218ENST00000555215 MED1Q15648 1581 aaPredicted RBP15.7■□□□□ 0.1
HNRNPC-218ENST00000555215 RBM33Q96EV2 1170 aaKnown RBP15.7■□□□□ 0.1
HNRNPC-218ENST00000555215 SLC26A8Q96RN1 970 aa15.7■□□□□ 0.1
HNRNPC-218ENST00000555215 STAG3Q9UJ98 1225 aa15.7■□□□□ 0.1
HNRNPC-218ENST00000555215 EID1Q9Y6B2 187 aa15.7■□□□□ 0.1
HNRNPC-218ENST00000555215 XIRP1Q702N8 1843 aaKnown RBP15.68■□□□□ 0.1
HNRNPC-218ENST00000555215 EFCAB6Q5THR3 1501 aa15.68■□□□□ 0.1
HNRNPC-218ENST00000555215 ANKRD50Q9ULJ7 1429 aa15.67■□□□□ 0.1
HNRNPC-218ENST00000555215 TET3O43151 1660 aa15.67■□□□□ 0.1
HNRNPC-218ENST00000555215 TMEM94Q12767 1356 aa15.65■□□□□ 0.1
HNRNPC-218ENST00000555215 PPARGC1BQ86YN6 1023 aaKnown RBP15.65■□□□□ 0.1
HNRNPC-218ENST00000555215 KCNA6P17658 529 aa15.64■□□□□ 0.09
HNRNPC-218ENST00000555215 SLC52A1Q9NWF4 448 aa15.63■□□□□ 0.09
HNRNPC-218ENST00000555215 ADGRB3O60242 1522 aa15.62■□□□□ 0.09
HNRNPC-218ENST00000555215 PROSER2Q86WR7 435 aaPredicted RBP15.61■□□□□ 0.09
HNRNPC-218ENST00000555215 RGS17Q9UGC6 210 aaPredicted RBP15.61■□□□□ 0.09
HNRNPC-218ENST00000555215 KDM5AP29375 1690 aaKnown RBP15.6■□□□□ 0.09
HNRNPC-218ENST00000555215 ZFYVE9O95405 1425 aa15.6■□□□□ 0.09
HNRNPC-218ENST00000555215 NUTM2DQ5VT03 806 aaPredicted RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms