RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 FAM135AQ9P2D6 1515 aa38.64■■■■□ 3.78
FOXA1-204ENST00000554607 UBAP1LF5GYI3 381 aa38.64■■■■□ 3.78
FOXA1-204ENST00000554607 DNMT1P26358 1616 aaKnown RBP38.63■■■■□ 3.77
FOXA1-204ENST00000554607 TNRQ92752 1358 aa38.62■■■■□ 3.77
FOXA1-204ENST00000554607 WASHC2CQ9Y4E1 1318 aa38.62■■■■□ 3.77
FOXA1-204ENST00000554607 SPATA31D1Q6ZQQ2 1576 aa38.61■■■■□ 3.77
FOXA1-204ENST00000554607 TSPY4P0CV99 314 aa38.61■■■■□ 3.77
FOXA1-204ENST00000554607 TSPY10P0CW01 314 aa38.61■■■■□ 3.77
FOXA1-204ENST00000554607 KDM5DQ9BY66 1539 aa38.6■■■■□ 3.77
FOXA1-204ENST00000554607 FBXO31Q5XUX0 539 aaPredicted RBP38.6■■■■□ 3.77
FOXA1-204ENST00000554607 PZPP20742 1482 aa38.59■■■■□ 3.77
FOXA1-204ENST00000554607 SOCS7O14512 581 aa38.58■■■■□ 3.77
FOXA1-204ENST00000554607 ARHGEF5Q12774 1597 aa38.53■■■■□ 3.76
FOXA1-204ENST00000554607 THEMISQ8N1K5 641 aaPredicted RBP38.49■■■■□ 3.75
FOXA1-204ENST00000554607 ANKLE2Q86XL3 938 aa38.48■■■■□ 3.75
FOXA1-204ENST00000554607 MIA2Q96PC5 1412 aa38.47■■■■□ 3.75
FOXA1-204ENST00000554607 POLR1AO95602 1720 aaPredicted RBP38.46■■■■□ 3.75
FOXA1-204ENST00000554607 NLRP1Q9C000 1473 aa38.45■■■■□ 3.75
FOXA1-204ENST00000554607 LRRC9Q6ZRR7 1453 aa38.43■■■■□ 3.74
FOXA1-204ENST00000554607 CPS1P31327 1500 aa38.42■■■■□ 3.74
FOXA1-204ENST00000554607 NEURL4Q96JN8 1562 aa38.41■■■■□ 3.74
FOXA1-204ENST00000554607 VPS8Q8N3P4 1428 aa38.41■■■■□ 3.74
FOXA1-204ENST00000554607 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.41■■■■□ 3.74
FOXA1-204ENST00000554607 SHANK2Q9UPX8 1470 aa38.39■■■■□ 3.74
FOXA1-204ENST00000554607 UGGT1Q9NYU2 1555 aa38.37■■■■□ 3.73
FOXA1-204ENST00000554607 TOM1O60784 492 aa38.37■■■■□ 3.73
FOXA1-204ENST00000554607 MAST1Q9Y2H9 1570 aa38.35■■■■□ 3.73
FOXA1-204ENST00000554607 RNF17Q9BXT8 1623 aaKnown RBP38.33■■■■□ 3.73
FOXA1-204ENST00000554607 MED14O60244 1454 aa38.31■■■■□ 3.72
FOXA1-204ENST00000554607 SCAF1Q9H7N4 1312 aaKnown RBP38.31■■■■□ 3.72
FOXA1-204ENST00000554607 NPHP4O75161 1426 aaPredicted RBP38.3■■■■□ 3.72
FOXA1-204ENST00000554607 DEPDC5O75140 1603 aa38.3■■■■□ 3.72
FOXA1-204ENST00000554607 MAP3K1Q13233 1512 aa38.29■■■■□ 3.72
FOXA1-204ENST00000554607 ZC3H13Q5T200 1668 aaKnown RBP38.29■■■■□ 3.72
FOXA1-204ENST00000554607 ABCC3O15438 1527 aa38.28■■■■□ 3.72
FOXA1-204ENST00000554607 PIP4K2BP78356 416 aa38.28■■■■□ 3.72
FOXA1-204ENST00000554607 EIF2AK4Q9P2K8 1649 aaKnown RBP38.27■■■■□ 3.72
FOXA1-204ENST00000554607 LOC105371045A0A1W2PR82 267 aa38.26■■■■□ 3.72
FOXA1-204ENST00000554607 KANK4Q5T7N3 995 aaPredicted RBP38.26■■■■□ 3.72
FOXA1-204ENST00000554607 VWDEQ8N2E2 1590 aa38.24■■■■□ 3.71
FOXA1-204ENST00000554607 MYOM3Q5VTT5 1437 aa38.24■■■■□ 3.71
FOXA1-204ENST00000554607 HSPA1LP34931 641 aa38.23■■■■□ 3.71
FOXA1-204ENST00000554607 ERVK-7P63135 1459 aa38.2■■■■□ 3.71
FOXA1-204ENST00000554607 DUOX2Q9NRD8 1548 aa38.17■■■■□ 3.7
FOXA1-204ENST00000554607 IQGAP1P46940 1657 aa38.17■■■■□ 3.7
FOXA1-204ENST00000554607 MROH1Q8NDA8 1641 aa38.14■■■■□ 3.7
FOXA1-204ENST00000554607 CEP152O94986 1710 aa38.08■■■■□ 3.69
FOXA1-204ENST00000554607 KIF15Q9NS87 1388 aa38.06■■■■□ 3.68
FOXA1-204ENST00000554607 CFAP65Q6ZU64 1925 aaKnown RBP38.06■■■■□ 3.68
FOXA1-204ENST00000554607 ARHGAP31Q2M1Z3 1444 aa38.04■■■■□ 3.68
FOXA1-204ENST00000554607 APLP2Q06481 763 aa38.04■■■■□ 3.68
FOXA1-204ENST00000554607 UBR1Q8IWV7 1749 aa38.03■■■■□ 3.68
FOXA1-204ENST00000554607 ERBINQ96RT1 1412 aa38.03■■■■□ 3.68
FOXA1-204ENST00000554607 RRP7BPQ9NSQ0 103 aa38.02■■■■□ 3.68
FOXA1-204ENST00000554607 LRRC7Q96NW7 1537 aa38.02■■■■□ 3.68
FOXA1-204ENST00000554607 MED1Q15648 1581 aaPredicted RBP38.02■■■■□ 3.68
FOXA1-204ENST00000554607 ABCC5O15440 1437 aa38.01■■■■□ 3.68
FOXA1-204ENST00000554607 SCAF11Q99590 1463 aaKnown RBP38.01■■■■□ 3.67
FOXA1-204ENST00000554607 PRDM15P57071 1507 aaPredicted RBP37.99■■■■□ 3.67
FOXA1-204ENST00000554607 TXNDC2Q86VQ3 553 aa37.99■■■■□ 3.67
FOXA1-204ENST00000554607 ALKQ9UM73 1620 aa37.98■■■■□ 3.67
FOXA1-204ENST00000554607 STRCP1A6NGW2 1772 aa37.98■■■■□ 3.67
FOXA1-204ENST00000554607 SYNMO15061 1565 aa37.97■■■■□ 3.67
FOXA1-204ENST00000554607 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.96■■■■□ 3.67
FOXA1-204ENST00000554607 EID1Q9Y6B2 187 aa37.96■■■■□ 3.67
FOXA1-204ENST00000554607 ARHGAP23Q9P227 1491 aa37.96■■■■□ 3.67
FOXA1-204ENST00000554607 PTPN23Q9H3S7 1636 aa37.95■■■■□ 3.67
FOXA1-204ENST00000554607 LTKP29376 864 aa37.95■■■■□ 3.67
FOXA1-204ENST00000554607 SLIT1O75093 1534 aa37.95■■■■□ 3.67
FOXA1-204ENST00000554607 CROCC2H7BZ55 1655 aa37.95■■■■□ 3.66
FOXA1-204ENST00000554607 KANK1Q14678 1352 aa37.94■■■■□ 3.66
FOXA1-204ENST00000554607 DAPK1P53355 1430 aa37.91■■■■□ 3.66
FOXA1-204ENST00000554607 STAG3Q9UJ98 1225 aa37.88■■■■□ 3.65
FOXA1-204ENST00000554607 PHF23Q9BUL5 403 aaPredicted RBP37.87■■■■□ 3.65
FOXA1-204ENST00000554607 ANKRD30AQ9BXX3 1397 aa37.86■■■■□ 3.65
FOXA1-204ENST00000554607 FGD6Q6ZV73 1430 aa37.86■■■■□ 3.65
FOXA1-204ENST00000554607 TMEM2Q9UHN6 1383 aa37.83■■■■□ 3.65
FOXA1-204ENST00000554607 PIK3C2BO00750 1634 aa37.81■■■■□ 3.64
FOXA1-204ENST00000554607 CHIC2Q9UKJ5 165 aa37.8■■■■□ 3.64
FOXA1-204ENST00000554607 LMTK2Q8IWU2 1503 aa37.79■■■■□ 3.64
FOXA1-204ENST00000554607 SENP3Q9H4L4 574 aaPredicted RBP37.79■■■■□ 3.64
FOXA1-204ENST00000554607 IDI1Q13907 227 aa37.77■■■■□ 3.64
FOXA1-204ENST00000554607 KDM5AP29375 1690 aaKnown RBP37.76■■■■□ 3.63
FOXA1-204ENST00000554607 EFCAB6Q5THR3 1501 aa37.74■■■■□ 3.63
FOXA1-204ENST00000554607 KCNA6P17658 529 aa37.67■■■■□ 3.62
FOXA1-204ENST00000554607 XIRP1Q702N8 1843 aaKnown RBP37.66■■■■□ 3.62
FOXA1-204ENST00000554607 SLC52A1Q9NWF4 448 aa37.66■■■■□ 3.62
FOXA1-204ENST00000554607 NOS1P29475 1434 aa37.66■■■■□ 3.62
FOXA1-204ENST00000554607 ADGRL2O95490 1459 aa37.63■■■■□ 3.61
FOXA1-204ENST00000554607 FAM135BQ49AJ0 1406 aa37.62■■■■□ 3.61
FOXA1-204ENST00000554607 TMEM94Q12767 1356 aa37.62■■■■□ 3.61
FOXA1-204ENST00000554607 SLC26A8Q96RN1 970 aa37.61■■■■□ 3.61
FOXA1-204ENST00000554607 TET3O43151 1660 aa37.6■■■■□ 3.61
FOXA1-204ENST00000554607 PROSER2Q86WR7 435 aaPredicted RBP37.59■■■■□ 3.61
FOXA1-204ENST00000554607 ADGRB3O60242 1522 aa37.58■■■■□ 3.61
FOXA1-204ENST00000554607 FAM50AQ14320 339 aaKnown RBP37.57■■■■□ 3.6
FOXA1-204ENST00000554607 RPRD2Q5VT52 1461 aaKnown RBP37.55■■■■□ 3.6
FOXA1-204ENST00000554607 ANKRD50Q9ULJ7 1429 aa37.54■■■■□ 3.6
FOXA1-204ENST00000554607 BCANQ96GW7 911 aa37.54■■■■□ 3.6
FOXA1-204ENST00000554607 HDGFP51858 240 aaKnown RBP37.51■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms