RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 NCKAP5LQ9HCH0 1330 aa17.35■□□□□ 0.37
ABCD4-221ENST00000554453 MAST1Q9Y2H9 1570 aa17.34■□□□□ 0.37
ABCD4-221ENST00000554453 FAM135AQ9P2D6 1515 aa17.32■□□□□ 0.36
ABCD4-221ENST00000554453 CAMSAP1Q5T5Y3 1602 aa17.32■□□□□ 0.36
ABCD4-221ENST00000554453 ABCC5O15440 1437 aa17.31■□□□□ 0.36
ABCD4-221ENST00000554453 TNRQ92752 1358 aa17.31■□□□□ 0.36
ABCD4-221ENST00000554453 RRP7BPQ9NSQ0 103 aa17.3■□□□□ 0.36
ABCD4-221ENST00000554453 PZPP20742 1482 aa17.3■□□□□ 0.36
ABCD4-221ENST00000554453 KDM5DQ9BY66 1539 aa17.29■□□□□ 0.36
ABCD4-221ENST00000554453 A2ML1A8K2U0 1454 aa17.29■□□□□ 0.36
ABCD4-221ENST00000554453 PLA2R1Q13018 1463 aa17.29■□□□□ 0.36
ABCD4-221ENST00000554453 THEMISQ8N1K5 641 aaPredicted RBP17.28■□□□□ 0.36
ABCD4-221ENST00000554453 FGD6Q6ZV73 1430 aa17.28■□□□□ 0.36
ABCD4-221ENST00000554453 CEP170BQ9Y4F5 1589 aaPredicted RBP17.27■□□□□ 0.35
ABCD4-221ENST00000554453 DUOX2Q9NRD8 1548 aa17.26■□□□□ 0.35
ABCD4-221ENST00000554453 TCOF1Q13428 1488 aaKnown RBP17.26■□□□□ 0.35
ABCD4-221ENST00000554453 PTPN23Q9H3S7 1636 aa17.26■□□□□ 0.35
ABCD4-221ENST00000554453 KIF15Q9NS87 1388 aa17.26■□□□□ 0.35
ABCD4-221ENST00000554453 MYO3AQ8NEV4 1616 aa17.25■□□□□ 0.35
ABCD4-221ENST00000554453 CHIC2Q9UKJ5 165 aa17.25■□□□□ 0.35
ABCD4-221ENST00000554453 ZNF142P52746 1687 aaPredicted RBP17.25■□□□□ 0.35
ABCD4-221ENST00000554453 CFAP65Q6ZU64 1925 aaKnown RBP17.25■□□□□ 0.35
ABCD4-221ENST00000554453 DAPK1P53355 1430 aa17.24■□□□□ 0.35
ABCD4-221ENST00000554453 ANKLE2Q86XL3 938 aa17.24■□□□□ 0.35
ABCD4-221ENST00000554453 SHANK2Q9UPX8 1470 aa17.24■□□□□ 0.35
ABCD4-221ENST00000554453 DNMT1P26358 1616 aaKnown RBP17.23■□□□□ 0.35
ABCD4-221ENST00000554453 LTBP4Q8N2S1 1624 aa17.23■□□□□ 0.35
ABCD4-221ENST00000554453 RNF17Q9BXT8 1623 aaKnown RBP17.23■□□□□ 0.35
ABCD4-221ENST00000554453 EIF2AK4Q9P2K8 1649 aaKnown RBP17.22■□□□□ 0.35
ABCD4-221ENST00000554453 ANKRD30AQ9BXX3 1397 aa17.22■□□□□ 0.35
ABCD4-221ENST00000554453 ZNF335Q9H4Z2 1342 aaPredicted RBP17.21■□□□□ 0.35
ABCD4-221ENST00000554453 ABCC3O15438 1527 aa17.21■□□□□ 0.35
ABCD4-221ENST00000554453 NLRP1Q9C000 1473 aa17.21■□□□□ 0.35
ABCD4-221ENST00000554453 FAM50AQ14320 339 aaKnown RBP17.2■□□□□ 0.34
ABCD4-221ENST00000554453 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.2■□□□□ 0.343e-10■■□□□ 14.5
ABCD4-221ENST00000554453 ERBINQ96RT1 1412 aa17.2■□□□□ 0.34
ABCD4-221ENST00000554453 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.19■□□□□ 0.34
ABCD4-221ENST00000554453 MROH1Q8NDA8 1641 aa17.18■□□□□ 0.34
ABCD4-221ENST00000554453 ARHGAP31Q2M1Z3 1444 aa17.17■□□□□ 0.34
ABCD4-221ENST00000554453 IQSEC2Q5JU85 1478 aa17.16■□□□□ 0.34
ABCD4-221ENST00000554453 ZC3H13Q5T200 1668 aaKnown RBP17.16■□□□□ 0.34
ABCD4-221ENST00000554453 KANK1Q14678 1352 aa17.15■□□□□ 0.34
ABCD4-221ENST00000554453 SPATA31D1Q6ZQQ2 1576 aa17.15■□□□□ 0.34
ABCD4-221ENST00000554453 UGGT1Q9NYU2 1555 aa17.15■□□□□ 0.34
ABCD4-221ENST00000554453 ERVK-7P63135 1459 aa17.15■□□□□ 0.34
ABCD4-221ENST00000554453 CROCC2H7BZ55 1655 aa17.15■□□□□ 0.34
ABCD4-221ENST00000554453 CEP152O94986 1710 aa17.12■□□□□ 0.33
ABCD4-221ENST00000554453 MED14O60244 1454 aa17.12■□□□□ 0.33
ABCD4-221ENST00000554453 ADGRL2O95490 1459 aa17.12■□□□□ 0.33
ABCD4-221ENST00000554453 PRDM15P57071 1507 aaPredicted RBP17.11■□□□□ 0.33
ABCD4-221ENST00000554453 UBAP1LF5GYI3 381 aa17.09■□□□□ 0.33
ABCD4-221ENST00000554453 IDI1Q13907 227 aa17.09■□□□□ 0.33
ABCD4-221ENST00000554453 NPHP4O75161 1426 aaPredicted RBP17.09■□□□□ 0.33
ABCD4-221ENST00000554453 NEURL4Q96JN8 1562 aa17.09■□□□□ 0.33
ABCD4-221ENST00000554453 ANKRD50Q9ULJ7 1429 aa17.08■□□□□ 0.32
ABCD4-221ENST00000554453 LTKP29376 864 aa17.08■□□□□ 0.32
ABCD4-221ENST00000554453 TXNDC2Q86VQ3 553 aa17.08■□□□□ 0.32
ABCD4-221ENST00000554453 DEPDC5O75140 1603 aa17.07■□□□□ 0.32
ABCD4-221ENST00000554453 LMTK2Q8IWU2 1503 aa17.07■□□□□ 0.32
ABCD4-221ENST00000554453 POLR1AO95602 1720 aaPredicted RBP17.07■□□□□ 0.32
ABCD4-221ENST00000554453 VWDEQ8N2E2 1590 aa17.06■□□□□ 0.32
ABCD4-221ENST00000554453 PPARGC1BQ86YN6 1023 aaKnown RBP17.06■□□□□ 0.32
ABCD4-221ENST00000554453 STAG3Q9UJ98 1225 aa17.06■□□□□ 0.32
ABCD4-221ENST00000554453 SLC52A1Q9NWF4 448 aa17.05■□□□□ 0.32
ABCD4-221ENST00000554453 EID1Q9Y6B2 187 aa17.05■□□□□ 0.32
ABCD4-221ENST00000554453 ROCK1Q13464 1354 aa17.03■□□□□ 0.32
ABCD4-221ENST00000554453 CPS1P31327 1500 aa17.02■□□□□ 0.32
ABCD4-221ENST00000554453 UBR1Q8IWV7 1749 aa17.02■□□□□ 0.32
ABCD4-221ENST00000554453 ARHGAP23Q9P227 1491 aa17.02■□□□□ 0.32
ABCD4-221ENST00000554453 TOM1O60784 492 aa17.02■□□□□ 0.32
ABCD4-221ENST00000554453 NOS1P29475 1434 aa17.02■□□□□ 0.31
ABCD4-221ENST00000554453 TMEM2Q9UHN6 1383 aa17.01■□□□□ 0.31
ABCD4-221ENST00000554453 SLIT1O75093 1534 aa17.01■□□□□ 0.31
ABCD4-221ENST00000554453 SCAF11Q99590 1463 aaKnown RBP17■□□□□ 0.31
ABCD4-221ENST00000554453 ITGAEP38570 1179 aa16.99■□□□□ 0.31
ABCD4-221ENST00000554453 IQGAP1P46940 1657 aa16.98■□□□□ 0.31
ABCD4-221ENST00000554453 RPRD2Q5VT52 1461 aaKnown RBP16.97■□□□□ 0.31
ABCD4-221ENST00000554453 PIK3C2BO00750 1634 aa16.96■□□□□ 0.3
ABCD4-221ENST00000554453 EFCAB6Q5THR3 1501 aa16.96■□□□□ 0.3
ABCD4-221ENST00000554453 HDGFP51858 240 aaKnown RBP16.95■□□□□ 0.3
ABCD4-221ENST00000554453 PIP4K2BP78356 416 aa16.94■□□□□ 0.3
ABCD4-221ENST00000554453 SYNMO15061 1565 aa16.94■□□□□ 0.3
ABCD4-221ENST00000554453 NUP155O75694 1391 aa16.93■□□□□ 0.3
ABCD4-221ENST00000554453 KDM5AP29375 1690 aaKnown RBP16.93■□□□□ 0.3
ABCD4-221ENST00000554453 KCNA6P17658 529 aa16.92■□□□□ 0.3
ABCD4-221ENST00000554453 LRRC7Q96NW7 1537 aa16.91■□□□□ 0.3
ABCD4-221ENST00000554453 DISP3Q9P2K9 1392 aa16.91■□□□□ 0.3
ABCD4-221ENST00000554453 STRCP1A6NGW2 1772 aa16.91■□□□□ 0.3
ABCD4-221ENST00000554453 SCAF1Q9H7N4 1312 aaKnown RBP16.91■□□□□ 0.3
ABCD4-221ENST00000554453 TET3O43151 1660 aa16.91■□□□□ 0.3
ABCD4-221ENST00000554453 HSPA1LP34931 641 aa16.9■□□□□ 0.3
ABCD4-221ENST00000554453 SLC26A8Q96RN1 970 aa16.9■□□□□ 0.3
ABCD4-221ENST00000554453 RRBP1Q9P2E9 1410 aaKnown RBP16.88■□□□□ 0.29
ABCD4-221ENST00000554453 UNC13BO14795 1591 aa16.88■□□□□ 0.29
ABCD4-221ENST00000554453 CHGAP10645 457 aaKnown RBP16.87■□□□□ 0.29
ABCD4-221ENST00000554453 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.87■□□□□ 0.29
ABCD4-221ENST00000554453 BCANQ96GW7 911 aa16.87■□□□□ 0.29
ABCD4-221ENST00000554453 GCC2Q8IWJ2 1684 aa16.86■□□□□ 0.29
ABCD4-221ENST00000554453 PROSER2Q86WR7 435 aaPredicted RBP16.86■□□□□ 0.29
ABCD4-221ENST00000554453 ADGRB3O60242 1522 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms