RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 PTPRKQ15262 1439 aa13.07□□□□□ -0.32
ACTN1-212ENST00000554158 TIAM1Q13009 1591 aa13.07□□□□□ -0.32
ACTN1-212ENST00000554158 A2ML1A8K2U0 1454 aa13.05□□□□□ -0.32
ACTN1-212ENST00000554158 DNMT1P26358 1616 aaKnown RBP13.05□□□□□ -0.32
ACTN1-212ENST00000554158 TCOF1Q13428 1488 aaKnown RBP13.04□□□□□ -0.32
ACTN1-212ENST00000554158 KIF3BO15066 747 aa13.03□□□□□ -0.32
ACTN1-212ENST00000554158 RTEL1-TNFRSF6BF6WH68 1400 aa13.03□□□□□ -0.32
ACTN1-212ENST00000554158 TOM1O60784 492 aa13.02□□□□□ -0.33
ACTN1-212ENST00000554158 DHX29Q7Z478 1369 aaKnown RBP13.02□□□□□ -0.33
ACTN1-212ENST00000554158 TNRQ92752 1358 aa13.02□□□□□ -0.33
ACTN1-212ENST00000554158 KDM5DQ9BY66 1539 aa13.02□□□□□ -0.33
ACTN1-212ENST00000554158 FAM135AQ9P2D6 1515 aa13.02□□□□□ -0.33
ACTN1-212ENST00000554158 CFAP65Q6ZU64 1925 aaKnown RBP13.01□□□□□ -0.33
ACTN1-212ENST00000554158 RSPH4AQ5TD94 716 aa13.01□□□□□ -0.33
ACTN1-212ENST00000554158 ZNF644Q9H582 1327 aaPredicted RBP13.01□□□□□ -0.33
ACTN1-212ENST00000554158 WASHC2CQ9Y4E1 1318 aa13.01□□□□□ -0.33
ACTN1-212ENST00000554158 CCDC141Q6ZP82 1450 aa13.01□□□□□ -0.33
ACTN1-212ENST00000554158 CPS1P31327 1500 aa13.01□□□□□ -0.33
ACTN1-212ENST00000554158 CEP162Q5TB80 1403 aa13□□□□□ -0.33
ACTN1-212ENST00000554158 PIP4K2BP78356 416 aa13□□□□□ -0.33
ACTN1-212ENST00000554158 TSPY4P0CV99 314 aa12.99□□□□□ -0.33
ACTN1-212ENST00000554158 TSPY10P0CW01 314 aa12.99□□□□□ -0.33
ACTN1-212ENST00000554158 ANKLE2Q86XL3 938 aa12.99□□□□□ -0.33
ACTN1-212ENST00000554158 THEMISQ8N1K5 641 aaPredicted RBP12.99□□□□□ -0.33
ACTN1-212ENST00000554158 PZPP20742 1482 aa12.98□□□□□ -0.33
ACTN1-212ENST00000554158 CAMSAP2Q08AD1 1489 aa12.98□□□□□ -0.33
ACTN1-212ENST00000554158 MBD5Q9P267 1494 aa12.98□□□□□ -0.33
ACTN1-212ENST00000554158 UGGT1Q9NYU2 1555 aa12.97□□□□□ -0.33
ACTN1-212ENST00000554158 SHANK2Q9UPX8 1470 aa12.97□□□□□ -0.33
ACTN1-212ENST00000554158 ZC3H13Q5T200 1668 aaKnown RBP12.96□□□□□ -0.33
ACTN1-212ENST00000554158 NCOA2Q15596 1464 aa12.96□□□□□ -0.34
ACTN1-212ENST00000554158 NLRP1Q9C000 1473 aa12.96□□□□□ -0.34
ACTN1-212ENST00000554158 IQGAP1P46940 1657 aa12.96□□□□□ -0.34
ACTN1-212ENST00000554158 NEURL4Q96JN8 1562 aa12.95□□□□□ -0.34
ACTN1-212ENST00000554158 FBXO31Q5XUX0 539 aaPredicted RBP12.95□□□□□ -0.34
ACTN1-212ENST00000554158 DEPDC5O75140 1603 aa12.95□□□□□ -0.34
ACTN1-212ENST00000554158 ARHGEF5Q12774 1597 aa12.94□□□□□ -0.34
ACTN1-212ENST00000554158 MED1Q15648 1581 aaPredicted RBP12.94□□□□□ -0.34
ACTN1-212ENST00000554158 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.94□□□□□ -0.34
ACTN1-212ENST00000554158 HSPA1LP34931 641 aa12.93□□□□□ -0.34
ACTN1-212ENST00000554158 NPHP4O75161 1426 aaPredicted RBP12.93□□□□□ -0.34
ACTN1-212ENST00000554158 MIA2Q96PC5 1412 aa12.93□□□□□ -0.34
ACTN1-212ENST00000554158 CEP152O94986 1710 aa12.91□□□□□ -0.34
ACTN1-212ENST00000554158 RNF17Q9BXT8 1623 aaKnown RBP12.91□□□□□ -0.34
ACTN1-212ENST00000554158 EIF2AK4Q9P2K8 1649 aaKnown RBP12.91□□□□□ -0.34
ACTN1-212ENST00000554158 SYNMO15061 1565 aa12.9□□□□□ -0.35
ACTN1-212ENST00000554158 VWDEQ8N2E2 1590 aa12.9□□□□□ -0.35
ACTN1-212ENST00000554158 MED14O60244 1454 aa12.88□□□□□ -0.35
ACTN1-212ENST00000554158 MAST1Q9Y2H9 1570 aa12.87□□□□□ -0.35
ACTN1-212ENST00000554158 UBR1Q8IWV7 1749 aa12.87□□□□□ -0.35
ACTN1-212ENST00000554158 ABCC3O15438 1527 aa12.87□□□□□ -0.35
ACTN1-212ENST00000554158 STRCP1A6NGW2 1772 aa12.85□□□□□ -0.35
ACTN1-212ENST00000554158 ERVK-7P63135 1459 aa12.85□□□□□ -0.35
ACTN1-212ENST00000554158 LRRC9Q6ZRR7 1453 aa12.85□□□□□ -0.35
ACTN1-212ENST00000554158 STAG3Q9UJ98 1225 aa12.84□□□□□ -0.35
ACTN1-212ENST00000554158 EID1Q9Y6B2 187 aa12.84□□□□□ -0.35
ACTN1-212ENST00000554158 DUOX2Q9NRD8 1548 aa12.83□□□□□ -0.35
ACTN1-212ENST00000554158 VPS8Q8N3P4 1428 aa12.82□□□□□ -0.36
ACTN1-212ENST00000554158 APLP2Q06481 763 aa12.82□□□□□ -0.36
ACTN1-212ENST00000554158 SCAF11Q99590 1463 aaKnown RBP12.82□□□□□ -0.36
ACTN1-212ENST00000554158 LRRC7Q96NW7 1537 aa12.82□□□□□ -0.36
ACTN1-212ENST00000554158 MYOM3Q5VTT5 1437 aa12.81□□□□□ -0.36
ACTN1-212ENST00000554158 CROCC2H7BZ55 1655 aa12.81□□□□□ -0.36
ACTN1-212ENST00000554158 KANK1Q14678 1352 aa12.81□□□□□ -0.36
ACTN1-212ENST00000554158 NPM3O75607 178 aaKnown RBP12.8□□□□□ -0.36
ACTN1-212ENST00000554158 TXNDC2Q86VQ3 553 aa12.8□□□□□ -0.36
ACTN1-212ENST00000554158 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.79□□□□□ -0.361e-6■■□□□ 11.5
ACTN1-212ENST00000554158 MROH1Q8NDA8 1641 aa12.79□□□□□ -0.36
ACTN1-212ENST00000554158 XIRP1Q702N8 1843 aaKnown RBP12.78□□□□□ -0.36
ACTN1-212ENST00000554158 KIF15Q9NS87 1388 aa12.78□□□□□ -0.36
ACTN1-212ENST00000554158 MAP3K1Q13233 1512 aa12.78□□□□□ -0.36
ACTN1-212ENST00000554158 PIK3C2BO00750 1634 aa12.77□□□□□ -0.36
ACTN1-212ENST00000554158 ALKQ9UM73 1620 aa12.77□□□□□ -0.36
ACTN1-212ENST00000554158 ERBINQ96RT1 1412 aa12.77□□□□□ -0.37
ACTN1-212ENST00000554158 PRDM15P57071 1507 aaPredicted RBP12.77□□□□□ -0.37
ACTN1-212ENST00000554158 PTPN23Q9H3S7 1636 aa12.77□□□□□ -0.37
ACTN1-212ENST00000554158 SLIT1O75093 1534 aa12.76□□□□□ -0.37
ACTN1-212ENST00000554158 KDM5AP29375 1690 aaKnown RBP12.76□□□□□ -0.37
ACTN1-212ENST00000554158 BCANQ96GW7 911 aa12.75□□□□□ -0.37
ACTN1-212ENST00000554158 RRP7BPQ9NSQ0 103 aa12.75□□□□□ -0.37
ACTN1-212ENST00000554158 ARHGAP31Q2M1Z3 1444 aa12.74□□□□□ -0.37
ACTN1-212ENST00000554158 EFCAB6Q5THR3 1501 aa12.73□□□□□ -0.37
ACTN1-212ENST00000554158 ARHGAP23Q9P227 1491 aa12.73□□□□□ -0.37
ACTN1-212ENST00000554158 LTKP29376 864 aa12.72□□□□□ -0.37
ACTN1-212ENST00000554158 KANK4Q5T7N3 995 aaPredicted RBP12.72□□□□□ -0.37
ACTN1-212ENST00000554158 ANKRD30AQ9BXX3 1397 aa12.71□□□□□ -0.37
ACTN1-212ENST00000554158 TMEM2Q9UHN6 1383 aa12.71□□□□□ -0.37
ACTN1-212ENST00000554158 ROBO1Q9Y6N7 1651 aa12.7□□□□□ -0.38
ACTN1-212ENST00000554158 PROSER2Q86WR7 435 aaPredicted RBP12.7□□□□□ -0.38
ACTN1-212ENST00000554158 DAPK1P53355 1430 aa12.7□□□□□ -0.38
ACTN1-212ENST00000554158 LOC105371045A0A1W2PR82 267 aa12.69□□□□□ -0.38
ACTN1-212ENST00000554158 CNKSR2Q8WXI2 1034 aa12.69□□□□□ -0.38
ACTN1-212ENST00000554158 ABCC5O15440 1437 aa12.69□□□□□ -0.38
ACTN1-212ENST00000554158 MYO5BQ9ULV0 1848 aa12.69□□□□□ -0.38
ACTN1-212ENST00000554158 KCNA6P17658 529 aa12.68□□□□□ -0.38
ACTN1-212ENST00000554158 CHIC2Q9UKJ5 165 aa12.68□□□□□ -0.38
ACTN1-212ENST00000554158 FAM135BQ49AJ0 1406 aa12.68□□□□□ -0.38
ACTN1-212ENST00000554158 PHLPP1O60346 1717 aa12.68□□□□□ -0.38
ACTN1-212ENST00000554158 TMEM94Q12767 1356 aa12.68□□□□□ -0.38
ACTN1-212ENST00000554158 PPP1R15AO75807 674 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms