RNA–Protein interactions for RNA: ENST00000554120.5

LRFN5-203, Transcript of leucine rich repeat and fibronectin type III domain containing 5, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRFN5, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN5-203ENST00000554120 ZNF335Q9H4Z2 1342 aaPredicted RBP11.31□□□□□ -0.6
LRFN5-203ENST00000554120 MYO3AQ8NEV4 1616 aa11.3□□□□□ -0.6
LRFN5-203ENST00000554120 SUPT6HQ7KZ85 1726 aaKnown RBP11.3□□□□□ -0.6
LRFN5-203ENST00000554120 GGT6Q6P531 493 aa11.3□□□□□ -0.6
LRFN5-203ENST00000554120 INO80Q9ULG1 1556 aaPredicted RBP11.3□□□□□ -0.6
LRFN5-203ENST00000554120 CLTCQ00610 1675 aaKnown RBP11.29□□□□□ -0.6
LRFN5-203ENST00000554120 A2ML1A8K2U0 1454 aa11.29□□□□□ -0.6
LRFN5-203ENST00000554120 RTEL1-TNFRSF6BF6WH68 1400 aa11.28□□□□□ -0.6
LRFN5-203ENST00000554120 MTUS2Q5JR59 1369 aa11.28□□□□□ -0.6
LRFN5-203ENST00000554120 FAM135AQ9P2D6 1515 aa11.28□□□□□ -0.6
LRFN5-203ENST00000554120 TOM1O60784 492 aa11.27□□□□□ -0.6
LRFN5-203ENST00000554120 CPS1P31327 1500 aa11.27□□□□□ -0.61
LRFN5-203ENST00000554120 ADGBQ8N7X0 1667 aa11.27□□□□□ -0.61
LRFN5-203ENST00000554120 RSPH4AQ5TD94 716 aa11.25□□□□□ -0.61
LRFN5-203ENST00000554120 DHX29Q7Z478 1369 aaKnown RBP11.25□□□□□ -0.61
LRFN5-203ENST00000554120 TNRQ92752 1358 aa11.24□□□□□ -0.61
LRFN5-203ENST00000554120 C1QBPQ07021 282 aaKnown RBP11.24□□□□□ -0.61
LRFN5-203ENST00000554120 DNMT1P26358 1616 aaKnown RBP11.23□□□□□ -0.61
LRFN5-203ENST00000554120 ANKLE2Q86XL3 938 aa11.23□□□□□ -0.61
LRFN5-203ENST00000554120 THEMISQ8N1K5 641 aaPredicted RBP11.23□□□□□ -0.61
LRFN5-203ENST00000554120 EHBP1L1Q8N3D4 1523 aa11.22□□□□□ -0.61
LRFN5-203ENST00000554120 HOXD11P31277 338 aaPredicted RBP11.22□□□□□ -0.61
LRFN5-203ENST00000554120 SHANK2Q9UPX8 1470 aa11.22□□□□□ -0.61
LRFN5-203ENST00000554120 PZPP20742 1482 aa11.21□□□□□ -0.61
LRFN5-203ENST00000554120 MBD5Q9P267 1494 aa11.21□□□□□ -0.61
LRFN5-203ENST00000554120 KDM5DQ9BY66 1539 aa11.21□□□□□ -0.61
LRFN5-203ENST00000554120 CEP162Q5TB80 1403 aa11.2□□□□□ -0.62
LRFN5-203ENST00000554120 NLRP1Q9C000 1473 aa11.2□□□□□ -0.62
LRFN5-203ENST00000554120 KIF3BO15066 747 aa11.2□□□□□ -0.62
LRFN5-203ENST00000554120 WASHC2CQ9Y4E1 1318 aa11.2□□□□□ -0.62
LRFN5-203ENST00000554120 HSPA1LP34931 641 aa11.2□□□□□ -0.62
LRFN5-203ENST00000554120 PIP4K2BP78356 416 aa11.2□□□□□ -0.62
LRFN5-203ENST00000554120 POLR1AO95602 1720 aaPredicted RBP11.19□□□□□ -0.62
LRFN5-203ENST00000554120 CCDC141Q6ZP82 1450 aa11.19□□□□□ -0.62
LRFN5-203ENST00000554120 TIAM1Q13009 1591 aa11.19□□□□□ -0.62
LRFN5-203ENST00000554120 SLC24A1O60721 1099 aa11.18□□□□□ -0.62
LRFN5-203ENST00000554120 MED1Q15648 1581 aaPredicted RBP11.18□□□□□ -0.62
LRFN5-203ENST00000554120 MIA2Q96PC5 1412 aa11.18□□□□□ -0.62
LRFN5-203ENST00000554120 MED14O60244 1454 aa11.18□□□□□ -0.62
LRFN5-203ENST00000554120 RNF216Q9NWF9 866 aaPredicted RBP11.17□□□□□ -0.62
LRFN5-203ENST00000554120 ZNF644Q9H582 1327 aaPredicted RBP11.17□□□□□ -0.62
LRFN5-203ENST00000554120 NPHP4O75161 1426 aaPredicted RBP11.17□□□□□ -0.62
LRFN5-203ENST00000554120 NEURL4Q96JN8 1562 aa11.17□□□□□ -0.62
LRFN5-203ENST00000554120 TSPY4P0CV99 314 aa11.17□□□□□ -0.62
LRFN5-203ENST00000554120 TSPY10P0CW01 314 aa11.17□□□□□ -0.62
LRFN5-203ENST00000554120 DEPDC5O75140 1603 aa11.16□□□□□ -0.62
LRFN5-203ENST00000554120 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.16□□□□□ -0.62
LRFN5-203ENST00000554120 FBXO31Q5XUX0 539 aaPredicted RBP11.16□□□□□ -0.62
LRFN5-203ENST00000554120 UGGT1Q9NYU2 1555 aa11.16□□□□□ -0.62
LRFN5-203ENST00000554120 VWDEQ8N2E2 1590 aa11.14□□□□□ -0.63
LRFN5-203ENST00000554120 NPM3O75607 178 aaKnown RBP11.14□□□□□ -0.63
LRFN5-203ENST00000554120 CAMSAP2Q08AD1 1489 aa11.14□□□□□ -0.63
LRFN5-203ENST00000554120 ARHGEF5Q12774 1597 aa11.12□□□□□ -0.63
LRFN5-203ENST00000554120 NCOA2Q15596 1464 aa11.11□□□□□ -0.63
LRFN5-203ENST00000554120 SYNMO15061 1565 aa11.11□□□□□ -0.63
LRFN5-203ENST00000554120 ZC3H13Q5T200 1668 aaKnown RBP11.11□□□□□ -0.63
LRFN5-203ENST00000554120 IQGAP1P46940 1657 aa11.1□□□□□ -0.63
LRFN5-203ENST00000554120 RNF17Q9BXT8 1623 aaKnown RBP11.1□□□□□ -0.63
LRFN5-203ENST00000554120 LRRC7Q96NW7 1537 aa11.09□□□□□ -0.63
LRFN5-203ENST00000554120 ABCC3O15438 1527 aa11.08□□□□□ -0.64
LRFN5-203ENST00000554120 MAST1Q9Y2H9 1570 aa11.08□□□□□ -0.64
LRFN5-203ENST00000554120 ERVK-7P63135 1459 aa11.08□□□□□ -0.64
LRFN5-203ENST00000554120 EIF2AK4Q9P2K8 1649 aaKnown RBP11.08□□□□□ -0.64
LRFN5-203ENST00000554120 EID1Q9Y6B2 187 aa11.06□□□□□ -0.64
LRFN5-203ENST00000554120 SCAF11Q99590 1463 aaKnown RBP11.06□□□□□ -0.64
LRFN5-203ENST00000554120 ALKQ9UM73 1620 aa11.06□□□□□ -0.64
LRFN5-203ENST00000554120 ARHGAP31Q2M1Z3 1444 aa11.04□□□□□ -0.64
LRFN5-203ENST00000554120 TXNDC2Q86VQ3 553 aa11.03□□□□□ -0.64
LRFN5-203ENST00000554120 SLIT1O75093 1534 aa11.03□□□□□ -0.64
LRFN5-203ENST00000554120 DUOX2Q9NRD8 1548 aa11.03□□□□□ -0.64
LRFN5-203ENST00000554120 MYOM3Q5VTT5 1437 aa11.03□□□□□ -0.64
LRFN5-203ENST00000554120 ARHGAP23Q9P227 1491 aa11.03□□□□□ -0.64
LRFN5-203ENST00000554120 FAM135BQ49AJ0 1406 aa11.02□□□□□ -0.65
LRFN5-203ENST00000554120 LRRC9Q6ZRR7 1453 aa11.02□□□□□ -0.65
LRFN5-203ENST00000554120 UBR1Q8IWV7 1749 aa11.01□□□□□ -0.65
LRFN5-203ENST00000554120 KANK1Q14678 1352 aa11.01□□□□□ -0.65
LRFN5-203ENST00000554120 STAG3Q9UJ98 1225 aa11□□□□□ -0.65
LRFN5-203ENST00000554120 STRCP1A6NGW2 1772 aa11□□□□□ -0.65
LRFN5-203ENST00000554120 ERBINQ96RT1 1412 aa11□□□□□ -0.65
LRFN5-203ENST00000554120 MAP3K1Q13233 1512 aa11□□□□□ -0.65
LRFN5-203ENST00000554120 MROH1Q8NDA8 1641 aa10.99□□□□□ -0.65
LRFN5-203ENST00000554120 VPS8Q8N3P4 1428 aa10.99□□□□□ -0.65
LRFN5-203ENST00000554120 LTKP29376 864 aa10.99□□□□□ -0.65
LRFN5-203ENST00000554120 PRDM15P57071 1507 aaPredicted RBP10.99□□□□□ -0.65
LRFN5-203ENST00000554120 KIF15Q9NS87 1388 aa10.98□□□□□ -0.65
LRFN5-203ENST00000554120 TMEM2Q9UHN6 1383 aa10.98□□□□□ -0.65
LRFN5-203ENST00000554120 KCNA6P17658 529 aa10.98□□□□□ -0.65
LRFN5-203ENST00000554120 CEP152O94986 1710 aa10.98□□□□□ -0.65
LRFN5-203ENST00000554120 KDM5AP29375 1690 aaKnown RBP10.96□□□□□ -0.65
LRFN5-203ENST00000554120 RGS17Q9UGC6 210 aaPredicted RBP10.96□□□□□ -0.66
LRFN5-203ENST00000554120 TMEM94Q12767 1356 aa10.95□□□□□ -0.66
LRFN5-203ENST00000554120 EFCAB6Q5THR3 1501 aa10.95□□□□□ -0.66
LRFN5-203ENST00000554120 PROSER2Q86WR7 435 aaPredicted RBP10.94□□□□□ -0.66
LRFN5-203ENST00000554120 NKTRP30414 1462 aaKnown RBP10.94□□□□□ -0.66
LRFN5-203ENST00000554120 HDGFP51858 240 aaKnown RBP10.94□□□□□ -0.66
LRFN5-203ENST00000554120 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.94□□□□□ -0.66
LRFN5-203ENST00000554120 LMTK2Q8IWU2 1503 aa10.94□□□□□ -0.66
LRFN5-203ENST00000554120 MSH6P52701 1360 aa10.93□□□□□ -0.66
LRFN5-203ENST00000554120 SLC52A1Q9NWF4 448 aa10.93□□□□□ -0.66
LRFN5-203ENST00000554120 PIK3C2BO00750 1634 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms