RNA–Protein interactions for RNA: ENST00000554120.5

LRFN5-203, Transcript of leucine rich repeat and fibronectin type III domain containing 5, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRFN5, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN5-203ENST00000554120 NISCHQ9Y2I1 1504 aa17.63■□□□□ 0.41
LRFN5-203ENST00000554120 AEBP2Q6ZN18 517 aaPredicted RBP17.41■□□□□ 0.38
LRFN5-203ENST00000554120 CHIC1Q5VXU3 224 aa16.44■□□□□ 0.22
LRFN5-203ENST00000554120 ABCC9O60706 1549 aa16.07■□□□□ 0.16
LRFN5-203ENST00000554120 CCDC180Q9P1Z9 1646 aa15.94■□□□□ 0.14
LRFN5-203ENST00000554120 RB1CC1Q8TDY2 1594 aa15.28■□□□□ 0.04
LRFN5-203ENST00000554120 DNAJC5BQ9UF47 199 aa15.2■□□□□ 0.02
LRFN5-203ENST00000554120 NACADO15069 1562 aa15.14■□□□□ 0.01
LRFN5-203ENST00000554120 SENP3Q9H4L4 574 aaPredicted RBP15.09■□□□□ 0.01
LRFN5-203ENST00000554120 DCAF8L2P0C7V8 631 aa14.95□□□□□ -0.02
LRFN5-203ENST00000554120 PABPN1Q86U42 306 aaKnown RBP eCLIP14.92□□□□□ -0.02
LRFN5-203ENST00000554120 MYO15BQ96JP2 1530 aa14.9□□□□□ -0.02
LRFN5-203ENST00000554120 UNC13AQ9UPW8 1703 aa14.79□□□□□ -0.04
LRFN5-203ENST00000554120 PHF23Q9BUL5 403 aaPredicted RBP14.75□□□□□ -0.05
LRFN5-203ENST00000554120 BICRAQ9NZM4 1560 aa14.75□□□□□ -0.05
LRFN5-203ENST00000554120 SHROOM4Q9ULL8 1493 aa14.7□□□□□ -0.06
LRFN5-203ENST00000554120 DCAF1Q9Y4B6 1507 aa14.61□□□□□ -0.07
LRFN5-203ENST00000554120 ZCCHC6Q5VYS8 1495 aaKnown RBP14.57□□□□□ -0.08
LRFN5-203ENST00000554120 CECR2Q9BXF3 1484 aa14.54□□□□□ -0.08
LRFN5-203ENST00000554120 CC2D2AQ9P2K1 1620 aa14.51□□□□□ -0.09
LRFN5-203ENST00000554120 EIF4G1Q04637 1599 aaKnown RBP14.45□□□□□ -0.1
LRFN5-203ENST00000554120 SCRIBQ14160 1630 aa14.43□□□□□ -0.1
LRFN5-203ENST00000554120 DNAJC5Q9H3Z4 198 aa14.21□□□□□ -0.13
LRFN5-203ENST00000554120 CUX2O14529 1486 aa14.03□□□□□ -0.16
LRFN5-203ENST00000554120 FOXD1Q16676 465 aa14.02□□□□□ -0.16
LRFN5-203ENST00000554120 NCAPD3P42695 1498 aa13.97□□□□□ -0.17
LRFN5-203ENST00000554120 ERCC6Q03468 1493 aa13.96□□□□□ -0.18
LRFN5-203ENST00000554120 POTEDQ86YR6 584 aa13.92□□□□□ -0.18
LRFN5-203ENST00000554120 ATAD2BQ9ULI0 1458 aa13.87□□□□□ -0.19
LRFN5-203ENST00000554120 SMARCA2P51531 1590 aa13.86□□□□□ -0.19
LRFN5-203ENST00000554120 HMGXB3Q12766 1538 aa13.85□□□□□ -0.19
LRFN5-203ENST00000554120 SMARCA4P51532 1647 aa13.78□□□□□ -0.2
LRFN5-203ENST00000554120 BAZ1BQ9UIG0 1483 aaKnown RBP13.74□□□□□ -0.21
LRFN5-203ENST00000554120 BAZ1AQ9NRL2 1556 aaPredicted RBP13.73□□□□□ -0.21
LRFN5-203ENST00000554120 NESP48681 1621 aa13.71□□□□□ -0.21
LRFN5-203ENST00000554120 LAMC3Q9Y6N6 1575 aa13.69□□□□□ -0.22
LRFN5-203ENST00000554120 PEG3Q9GZU2 1588 aa13.68□□□□□ -0.22
LRFN5-203ENST00000554120 THOC2Q8NI27 1593 aaKnown RBP13.65□□□□□ -0.22
LRFN5-203ENST00000554120 PDS5BQ9NTI5 1447 aa13.65□□□□□ -0.22
LRFN5-203ENST00000554120 MROH2BQ7Z745 1585 aa13.53□□□□□ -0.24
LRFN5-203ENST00000554120 CADPSQ9ULU8 1353 aa13.53□□□□□ -0.24
LRFN5-203ENST00000554120 KIF21AQ7Z4S6 1674 aa13.53□□□□□ -0.24
LRFN5-203ENST00000554120 MRC2Q9UBG0 1479 aa13.51□□□□□ -0.25
LRFN5-203ENST00000554120 TRIM41Q8WV44 630 aa13.47□□□□□ -0.25
LRFN5-203ENST00000554120 MSH5O43196 834 aa13.46□□□□□ -0.25
LRFN5-203ENST00000554120 WDR62O43379 1518 aa13.46□□□□□ -0.25
LRFN5-203ENST00000554120 CEP164Q9UPV0 1460 aa13.41□□□□□ -0.26
LRFN5-203ENST00000554120 FANCD2Q9BXW9 1451 aa13.36□□□□□ -0.27
LRFN5-203ENST00000554120 OSCARQ8IYS5 282 aa13.34□□□□□ -0.27
LRFN5-203ENST00000554120 WIZO95785 1651 aa13.34□□□□□ -0.27
LRFN5-203ENST00000554120 CFTRP13569 1480 aa13.32□□□□□ -0.28
LRFN5-203ENST00000554120 PLPPR3Q6T4P5 718 aa13.25□□□□□ -0.29
LRFN5-203ENST00000554120 TOP2AP11388 1531 aaKnown RBP13.24□□□□□ -0.29
LRFN5-203ENST00000554120 URB2Q14146 1524 aaKnown RBP13.22□□□□□ -0.29
LRFN5-203ENST00000554120 RSF1Q96T23 1441 aaPredicted RBP13.21□□□□□ -0.3
LRFN5-203ENST00000554120 IFT140Q96RY7 1462 aa13.17□□□□□ -0.3
LRFN5-203ENST00000554120 PRDM2Q13029 1718 aa13.13□□□□□ -0.31
LRFN5-203ENST00000554120 ABCC8Q09428 1581 aa13.12□□□□□ -0.31
LRFN5-203ENST00000554120 RIMBP3CA6NJZ7 1639 aa13.12□□□□□ -0.31
LRFN5-203ENST00000554120 RIMBP3BA6NNM3 1639 aa13.12□□□□□ -0.31
LRFN5-203ENST00000554120 RIMBP3Q9UFD9 1639 aa13.12□□□□□ -0.31
LRFN5-203ENST00000554120 ARHGEF11O15085 1522 aa13.08□□□□□ -0.32
LRFN5-203ENST00000554120 TOPBP1Q92547 1522 aa13.07□□□□□ -0.32
LRFN5-203ENST00000554120 ZNF608Q9ULD9 1512 aaPredicted RBP13.07□□□□□ -0.32
LRFN5-203ENST00000554120 CCDC88BA6NC98 1476 aa13.06□□□□□ -0.32
LRFN5-203ENST00000554120 DNMBPQ6XZF7 1577 aa13.02□□□□□ -0.32
LRFN5-203ENST00000554120 EIF4G3O43432 1585 aaKnown RBP13.01□□□□□ -0.33
LRFN5-203ENST00000554120 CYB5RLQ6IPT4 315 aa13□□□□□ -0.33
LRFN5-203ENST00000554120 PIAS4Q8N2W9 510 aaPredicted RBP13□□□□□ -0.33
LRFN5-203ENST00000554120 AQRO60306 1485 aaKnown RBP eCLIP12.95□□□□□ -0.34
LRFN5-203ENST00000554120 TRHP20396 242 aaPredicted RBP12.94□□□□□ -0.34
LRFN5-203ENST00000554120 TARBP1Q13395 1621 aaKnown RBP12.94□□□□□ -0.34
LRFN5-203ENST00000554120 FBLN2P98095 1184 aa12.93□□□□□ -0.34
LRFN5-203ENST00000554120 CHD1O14646 1710 aa12.92□□□□□ -0.34
LRFN5-203ENST00000554120 POLA1P09884 1462 aaPredicted RBP12.92□□□□□ -0.34
LRFN5-203ENST00000554120 ARAP1Q96P48 1450 aa12.92□□□□□ -0.34
LRFN5-203ENST00000554120 WDR97A6NE52 1622 aa12.91□□□□□ -0.34
LRFN5-203ENST00000554120 SOGA1O94964 1423 aa12.88□□□□□ -0.35
LRFN5-203ENST00000554120 CHMP7Q8WUX9 453 aaPredicted RBP12.85□□□□□ -0.35
LRFN5-203ENST00000554120 SYNJ1O43426 1573 aa12.84□□□□□ -0.35
LRFN5-203ENST00000554120 MAGI1Q96QZ7 1491 aaPredicted RBP12.84□□□□□ -0.35
LRFN5-203ENST00000554120 TDRD9Q8NDG6 1382 aaKnown RBP12.84□□□□□ -0.35
LRFN5-203ENST00000554120 RAD54L2Q9Y4B4 1467 aa12.84□□□□□ -0.35
LRFN5-203ENST00000554120 SNAPC4Q5SXM2 1469 aa12.83□□□□□ -0.36
LRFN5-203ENST00000554120 CLASP1Q7Z460 1538 aa12.82□□□□□ -0.36
LRFN5-203ENST00000554120 GRIN2BQ13224 1484 aa12.82□□□□□ -0.36
LRFN5-203ENST00000554120 FGD5Q6ZNL6 1462 aa12.81□□□□□ -0.36
LRFN5-203ENST00000554120 SYNJ2O15056 1496 aa12.78□□□□□ -0.36
LRFN5-203ENST00000554120 CUX1P39880 1505 aa12.74□□□□□ -0.37
LRFN5-203ENST00000554120 GAPVD1Q14C86 1478 aa12.72□□□□□ -0.37
LRFN5-203ENST00000554120 ABCA10Q8WWZ4 1543 aa12.68□□□□□ -0.38
LRFN5-203ENST00000554120 PBRM1Q86U86 1689 aa12.67□□□□□ -0.38
LRFN5-203ENST00000554120 ABCA5Q8WWZ7 1642 aa12.64□□□□□ -0.39
LRFN5-203ENST00000554120 PPP6R1Q9UPN7 881 aa12.64□□□□□ -0.39
LRFN5-203ENST00000554120 GRIN2AQ12879 1464 aa12.62□□□□□ -0.39
LRFN5-203ENST00000554120 WRNQ14191 1432 aaPredicted RBP eCLIP12.61□□□□□ -0.39
LRFN5-203ENST00000554120 NUP160Q12769 1436 aa12.6□□□□□ -0.39
LRFN5-203ENST00000554120 ADRA2BP18089 450 aa12.59□□□□□ -0.39
LRFN5-203ENST00000554120 FHAD1B1AJZ9 1412 aa12.58□□□□□ -0.4
LRFN5-203ENST00000554120 ADAMTS12P58397 1594 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms