RNA–Protein interactions for RNA: ENST00000553970.1

SEC23A-206, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-206ENST00000553970 A2ML1A8K2U0 1454 aa27.31■■□□□ 1.96
SEC23A-206ENST00000553970 TCOF1Q13428 1488 aaKnown RBP27.31■■□□□ 1.96
SEC23A-206ENST00000553970 NCKAP5LQ9HCH0 1330 aa27.29■■□□□ 1.96
SEC23A-206ENST00000553970 LRRC9Q6ZRR7 1453 aa27.28■■□□□ 1.96
SEC23A-206ENST00000553970 WASHC2CQ9Y4E1 1318 aa27.27■■□□□ 1.96
SEC23A-206ENST00000553970 PZPP20742 1482 aa27.26■■□□□ 1.95
SEC23A-206ENST00000553970 MAP3K1Q13233 1512 aa27.26■■□□□ 1.95
SEC23A-206ENST00000553970 TNRQ92752 1358 aa27.24■■□□□ 1.95
SEC23A-206ENST00000553970 DNMT1P26358 1616 aaKnown RBP27.23■■□□□ 1.95
SEC23A-206ENST00000553970 ZNF335Q9H4Z2 1342 aaPredicted RBP27.19■■□□□ 1.94
SEC23A-206ENST00000553970 MAST1Q9Y2H9 1570 aa27.19■■□□□ 1.94
SEC23A-206ENST00000553970 MIA2Q96PC5 1412 aa27.19■■□□□ 1.94
SEC23A-206ENST00000553970 NLRP1Q9C000 1473 aa27.18■■□□□ 1.94
SEC23A-206ENST00000553970 DISP3Q9P2K9 1392 aa27.16■■□□□ 1.94
SEC23A-206ENST00000553970 POLR1AO95602 1720 aaPredicted RBP27.16■■□□□ 1.94
SEC23A-206ENST00000553970 ZC3H13Q5T200 1668 aaKnown RBP27.15■■□□□ 1.94
SEC23A-206ENST00000553970 THEMISQ8N1K5 641 aaPredicted RBP27.15■■□□□ 1.94
SEC23A-206ENST00000553970 EIF2AK4Q9P2K8 1649 aaKnown RBP27.15■■□□□ 1.94
SEC23A-206ENST00000553970 MYOM3Q5VTT5 1437 aa27.15■■□□□ 1.94
SEC23A-206ENST00000553970 FBXO31Q5XUX0 539 aaPredicted RBP27.14■■□□□ 1.94
SEC23A-206ENST00000553970 RNF17Q9BXT8 1623 aaKnown RBP27.14■■□□□ 1.94
SEC23A-206ENST00000553970 LOC105371045A0A1W2PR82 267 aa27.12■■□□□ 1.93
SEC23A-206ENST00000553970 UBAP1LF5GYI3 381 aa27.11■■□□□ 1.93
SEC23A-206ENST00000553970 ANKLE2Q86XL3 938 aa27.11■■□□□ 1.93
SEC23A-206ENST00000553970 UGGT1Q9NYU2 1555 aa27.09■■□□□ 1.93
SEC23A-206ENST00000553970 APLP2Q06481 763 aa27.09■■□□□ 1.93
SEC23A-206ENST00000553970 CPS1P31327 1500 aa27.08■■□□□ 1.93
SEC23A-206ENST00000553970 ABCC3O15438 1527 aa27.06■■□□□ 1.92
SEC23A-206ENST00000553970 KANK4Q5T7N3 995 aaPredicted RBP27.06■■□□□ 1.92
SEC23A-206ENST00000553970 DUOX2Q9NRD8 1548 aa27.06■■□□□ 1.92
SEC23A-206ENST00000553970 SPATA31D1Q6ZQQ2 1576 aa27.05■■□□□ 1.92
SEC23A-206ENST00000553970 NEURL4Q96JN8 1562 aa27.05■■□□□ 1.92
SEC23A-206ENST00000553970 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.04■■□□□ 1.92
SEC23A-206ENST00000553970 DEPDC5O75140 1603 aa27.04■■□□□ 1.92
SEC23A-206ENST00000553970 SHANK2Q9UPX8 1470 aa27.02■■□□□ 1.92
SEC23A-206ENST00000553970 MED14O60244 1454 aa27.01■■□□□ 1.91
SEC23A-206ENST00000553970 ERVK-7P63135 1459 aa26.99■■□□□ 1.91
SEC23A-206ENST00000553970 NPHP4O75161 1426 aaPredicted RBP26.99■■□□□ 1.91
SEC23A-206ENST00000553970 ERBINQ96RT1 1412 aa26.98■■□□□ 1.91
SEC23A-206ENST00000553970 TOM1O60784 492 aa26.97■■□□□ 1.91
SEC23A-206ENST00000553970 KIF15Q9NS87 1388 aa26.97■■□□□ 1.91
SEC23A-206ENST00000553970 MROH1Q8NDA8 1641 aa26.96■■□□□ 1.91
SEC23A-206ENST00000553970 CROCC2H7BZ55 1655 aa26.95■■□□□ 1.9
SEC23A-206ENST00000553970 PTPN23Q9H3S7 1636 aa26.94■■□□□ 1.9
SEC23A-206ENST00000553970 IQGAP1P46940 1657 aa26.93■■□□□ 1.9
SEC23A-206ENST00000553970 PRDM15P57071 1507 aaPredicted RBP26.93■■□□□ 1.9
SEC23A-206ENST00000553970 CEP152O94986 1710 aa26.93■■□□□ 1.9
SEC23A-206ENST00000553970 ARHGAP31Q2M1Z3 1444 aa26.92■■□□□ 1.9
SEC23A-206ENST00000553970 KANK1Q14678 1352 aa26.91■■□□□ 1.9
SEC23A-206ENST00000553970 VWDEQ8N2E2 1590 aa26.91■■□□□ 1.9
SEC23A-206ENST00000553970 ABCC5O15440 1437 aa26.9■■□□□ 1.9
SEC23A-206ENST00000553970 SOCS7O14512 581 aa26.9■■□□□ 1.9
SEC23A-206ENST00000553970 ILDR2Q71H61 639 aa26.89■■□□□ 1.9
SEC23A-206ENST00000553970 SCAF1Q9H7N4 1312 aaKnown RBP26.89■■□□□ 1.89
SEC23A-206ENST00000553970 DAPK1P53355 1430 aa26.88■■□□□ 1.89
SEC23A-206ENST00000553970 FGD6Q6ZV73 1430 aa26.88■■□□□ 1.89
SEC23A-206ENST00000553970 RRP7BPQ9NSQ0 103 aa26.87■■□□□ 1.89
SEC23A-206ENST00000553970 ANKRD30AQ9BXX3 1397 aa26.85■■□□□ 1.89
SEC23A-206ENST00000553970 UBR1Q8IWV7 1749 aa26.85■■□□□ 1.89
SEC23A-206ENST00000553970 SCAF11Q99590 1463 aaKnown RBP26.84■■□□□ 1.89
SEC23A-206ENST00000553970 CFAP65Q6ZU64 1925 aaKnown RBP26.83■■□□□ 1.89
SEC23A-206ENST00000553970 PIP4K2BP78356 416 aa26.83■■□□□ 1.89
SEC23A-206ENST00000553970 SYNMO15061 1565 aa26.83■■□□□ 1.89
SEC23A-206ENST00000553970 EID1Q9Y6B2 187 aa26.81■■□□□ 1.88
SEC23A-206ENST00000553970 SLIT1O75093 1534 aa26.8■■□□□ 1.88
SEC23A-206ENST00000553970 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.8■■□□□ 1.88
SEC23A-206ENST00000553970 ARHGAP23Q9P227 1491 aa26.79■■□□□ 1.88
SEC23A-206ENST00000553970 LMTK2Q8IWU2 1503 aa26.77■■□□□ 1.88
SEC23A-206ENST00000553970 HSPA1LP34931 641 aa26.77■■□□□ 1.88
SEC23A-206ENST00000553970 TXNDC2Q86VQ3 553 aa26.76■■□□□ 1.87
SEC23A-206ENST00000553970 STAG3Q9UJ98 1225 aa26.76■■□□□ 1.87
SEC23A-206ENST00000553970 KDM5AP29375 1690 aaKnown RBP26.75■■□□□ 1.87
SEC23A-206ENST00000553970 LRRC7Q96NW7 1537 aa26.75■■□□□ 1.87
SEC23A-206ENST00000553970 CHIC2Q9UKJ5 165 aa26.72■■□□□ 1.87
SEC23A-206ENST00000553970 ADGRL2O95490 1459 aa26.71■■□□□ 1.87
SEC23A-206ENST00000553970 TMEM2Q9UHN6 1383 aa26.71■■□□□ 1.87
SEC23A-206ENST00000553970 PIK3C2BO00750 1634 aa26.7■■□□□ 1.86
SEC23A-206ENST00000553970 STRCP1A6NGW2 1772 aa26.69■■□□□ 1.86
SEC23A-206ENST00000553970 LTKP29376 864 aa26.69■■□□□ 1.86
SEC23A-206ENST00000553970 EFCAB6Q5THR3 1501 aa26.69■■□□□ 1.86
SEC23A-206ENST00000553970 MED1Q15648 1581 aaPredicted RBP26.66■■□□□ 1.86
SEC23A-206ENST00000553970 SLC52A1Q9NWF4 448 aa26.65■■□□□ 1.86
SEC23A-206ENST00000553970 ALKQ9UM73 1620 aa26.65■■□□□ 1.86
SEC23A-206ENST00000553970 RPRD2Q5VT52 1461 aaKnown RBP26.64■■□□□ 1.86
SEC23A-206ENST00000553970 FAM50AQ14320 339 aaKnown RBP26.64■■□□□ 1.86
SEC23A-206ENST00000553970 IDI1Q13907 227 aa26.63■■□□□ 1.85
SEC23A-206ENST00000553970 NOS1P29475 1434 aa26.63■■□□□ 1.85
SEC23A-206ENST00000553970 ANKRD50Q9ULJ7 1429 aa26.62■■□□□ 1.85
SEC23A-206ENST00000553970 ADGRB3O60242 1522 aa26.6■■□□□ 1.85
SEC23A-206ENST00000553970 PHF23Q9BUL5 403 aaPredicted RBP26.58■■□□□ 1.85
SEC23A-206ENST00000553970 HDGFP51858 240 aaKnown RBP26.55■■□□□ 1.84
SEC23A-206ENST00000553970 KCNA6P17658 529 aa26.54■■□□□ 1.84
SEC23A-206ENST00000553970 TET3O43151 1660 aa26.53■■□□□ 1.84
SEC23A-206ENST00000553970 NKTRP30414 1462 aaKnown RBP26.5■■□□□ 1.83
SEC23A-206ENST00000553970 XIRP1Q702N8 1843 aaKnown RBP26.49■■□□□ 1.83
SEC23A-206ENST00000553970 BCANQ96GW7 911 aa26.49■■□□□ 1.83
SEC23A-206ENST00000553970 FAM135BQ49AJ0 1406 aa26.48■■□□□ 1.83
SEC23A-206ENST00000553970 TMEM94Q12767 1356 aa26.48■■□□□ 1.83
SEC23A-206ENST00000553970 ROCK1Q13464 1354 aa26.48■■□□□ 1.83
SEC23A-206ENST00000553970 GCC2Q8IWJ2 1684 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms