RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 DISP3Q9P2K9 1392 aa15.68■□□□□ 0.1
ACTN1-210ENST00000553779 PKD2Q13563 968 aa15.68■□□□□ 0.1
ACTN1-210ENST00000553779 DNMT1P26358 1616 aaKnown RBP15.68■□□□□ 0.1
ACTN1-210ENST00000553779 VPS8Q8N3P4 1428 aa15.68■□□□□ 0.1
ACTN1-210ENST00000553779 TSPY4P0CV99 314 aa15.67■□□□□ 0.1
ACTN1-210ENST00000553779 TSPY10P0CW01 314 aa15.67■□□□□ 0.1
ACTN1-210ENST00000553779 RSPH4AQ5TD94 716 aa15.67■□□□□ 0.1
ACTN1-210ENST00000553779 ZC3H13Q5T200 1668 aaKnown RBP15.66■□□□□ 0.1
ACTN1-210ENST00000553779 WASHC2CQ9Y4E1 1318 aa15.66■□□□□ 0.1
ACTN1-210ENST00000553779 LRRC9Q6ZRR7 1453 aa15.65■□□□□ 0.1
ACTN1-210ENST00000553779 TNRQ92752 1358 aa15.65■□□□□ 0.1
ACTN1-210ENST00000553779 PZPP20742 1482 aa15.65■□□□□ 0.1
ACTN1-210ENST00000553779 CEP152O94986 1710 aa15.64■□□□□ 0.09
ACTN1-210ENST00000553779 TCOF1Q13428 1488 aaKnown RBP15.64■□□□□ 0.09
ACTN1-210ENST00000553779 ZNF335Q9H4Z2 1342 aaPredicted RBP15.64■□□□□ 0.09
ACTN1-210ENST00000553779 RNF17Q9BXT8 1623 aaKnown RBP15.63■□□□□ 0.09
ACTN1-210ENST00000553779 EIF2AK4Q9P2K8 1649 aaKnown RBP15.63■□□□□ 0.09
ACTN1-210ENST00000553779 MAST1Q9Y2H9 1570 aa15.62■□□□□ 0.09
ACTN1-210ENST00000553779 UBAP1LF5GYI3 381 aa15.61■□□□□ 0.09
ACTN1-210ENST00000553779 CROCC2H7BZ55 1655 aa15.6■□□□□ 0.09
ACTN1-210ENST00000553779 APLP2Q06481 763 aa15.6■□□□□ 0.09
ACTN1-210ENST00000553779 LOC105371045A0A1W2PR82 267 aa15.59■□□□□ 0.09
ACTN1-210ENST00000553779 SCAF1Q9H7N4 1312 aaKnown RBP15.59■□□□□ 0.09
ACTN1-210ENST00000553779 UGGT1Q9NYU2 1555 aa15.58■□□□□ 0.09
ACTN1-210ENST00000553779 FBXO31Q5XUX0 539 aaPredicted RBP15.58■□□□□ 0.08
ACTN1-210ENST00000553779 MYOM3Q5VTT5 1437 aa15.58■□□□□ 0.08
ACTN1-210ENST00000553779 NLRP1Q9C000 1473 aa15.58■□□□□ 0.08
ACTN1-210ENST00000553779 NEURL4Q96JN8 1562 aa15.58■□□□□ 0.08
ACTN1-210ENST00000553779 IQGAP1P46940 1657 aa15.57■□□□□ 0.08
ACTN1-210ENST00000553779 ABCC3O15438 1527 aa15.57■□□□□ 0.08
ACTN1-210ENST00000553779 MAP3K1Q13233 1512 aa15.57■□□□□ 0.08
ACTN1-210ENST00000553779 PTPN23Q9H3S7 1636 aa15.55■□□□□ 0.08
ACTN1-210ENST00000553779 CPS1P31327 1500 aa15.55■□□□□ 0.08
ACTN1-210ENST00000553779 DEPDC5O75140 1603 aa15.54■□□□□ 0.08
ACTN1-210ENST00000553779 DUOX2Q9NRD8 1548 aa15.54■□□□□ 0.08
ACTN1-210ENST00000553779 MIA2Q96PC5 1412 aa15.54■□□□□ 0.08
ACTN1-210ENST00000553779 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.54■□□□□ 0.08
ACTN1-210ENST00000553779 ANKLE2Q86XL3 938 aa15.54■□□□□ 0.08
ACTN1-210ENST00000553779 THEMISQ8N1K5 641 aaPredicted RBP15.54■□□□□ 0.08
ACTN1-210ENST00000553779 KANK4Q5T7N3 995 aaPredicted RBP15.52■□□□□ 0.08
ACTN1-210ENST00000553779 UBR1Q8IWV7 1749 aa15.51■□□□□ 0.07
ACTN1-210ENST00000553779 MROH1Q8NDA8 1641 aa15.51■□□□□ 0.07
ACTN1-210ENST00000553779 ERVK-7P63135 1459 aa15.51■□□□□ 0.07
ACTN1-210ENST00000553779 SHANK2Q9UPX8 1470 aa15.51■□□□□ 0.07
ACTN1-210ENST00000553779 NPHP4O75161 1426 aaPredicted RBP15.51■□□□□ 0.07
ACTN1-210ENST00000553779 PIP4K2BP78356 416 aa15.5■□□□□ 0.07
ACTN1-210ENST00000553779 KIF15Q9NS87 1388 aa15.49■□□□□ 0.07
ACTN1-210ENST00000553779 TOM1O60784 492 aa15.48■□□□□ 0.07
ACTN1-210ENST00000553779 VWDEQ8N2E2 1590 aa15.48■□□□□ 0.07
ACTN1-210ENST00000553779 PRDM15P57071 1507 aaPredicted RBP15.48■□□□□ 0.07
ACTN1-210ENST00000553779 SYNMO15061 1565 aa15.47■□□□□ 0.07
ACTN1-210ENST00000553779 ERBINQ96RT1 1412 aa15.47■□□□□ 0.07
ACTN1-210ENST00000553779 KANK1Q14678 1352 aa15.47■□□□□ 0.07
ACTN1-210ENST00000553779 ILDR2Q71H61 639 aa15.46■□□□□ 0.07
ACTN1-210ENST00000553779 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.46■□□□□ 0.073e-8■□□□□ 9.2
ACTN1-210ENST00000553779 RRP7BPQ9NSQ0 103 aa15.45■□□□□ 0.06
ACTN1-210ENST00000553779 MED14O60244 1454 aa15.45■□□□□ 0.06
ACTN1-210ENST00000553779 STRCP1A6NGW2 1772 aa15.44■□□□□ 0.06
ACTN1-210ENST00000553779 DAPK1P53355 1430 aa15.43■□□□□ 0.06
ACTN1-210ENST00000553779 FGD6Q6ZV73 1430 aa15.43■□□□□ 0.06
ACTN1-210ENST00000553779 PIK3C2BO00750 1634 aa15.43■□□□□ 0.06
ACTN1-210ENST00000553779 SOCS7O14512 581 aa15.43■□□□□ 0.06
ACTN1-210ENST00000553779 STAG3Q9UJ98 1225 aa15.43■□□□□ 0.06
ACTN1-210ENST00000553779 SCAF11Q99590 1463 aaKnown RBP15.42■□□□□ 0.06
ACTN1-210ENST00000553779 ABCC5O15440 1437 aa15.42■□□□□ 0.06
ACTN1-210ENST00000553779 ANKRD30AQ9BXX3 1397 aa15.41■□□□□ 0.06
ACTN1-210ENST00000553779 SENP3Q9H4L4 574 aaPredicted RBP15.4■□□□□ 0.06
ACTN1-210ENST00000553779 CHIC2Q9UKJ5 165 aa15.4■□□□□ 0.06
ACTN1-210ENST00000553779 MED1Q15648 1581 aaPredicted RBP15.4■□□□□ 0.06
ACTN1-210ENST00000553779 HSPA1LP34931 641 aa15.39■□□□□ 0.05
ACTN1-210ENST00000553779 EID1Q9Y6B2 187 aa15.39■□□□□ 0.05
ACTN1-210ENST00000553779 KDM5AP29375 1690 aaKnown RBP15.38■□□□□ 0.05
ACTN1-210ENST00000553779 ARHGAP31Q2M1Z3 1444 aa15.37■□□□□ 0.05
ACTN1-210ENST00000553779 MYO5BQ9ULV0 1848 aa15.36■□□□□ 0.05
ACTN1-210ENST00000553779 FAM50AQ14320 339 aaKnown RBP15.36■□□□□ 0.05
ACTN1-210ENST00000553779 TXNDC2Q86VQ3 553 aa15.36■□□□□ 0.05
ACTN1-210ENST00000553779 PHF23Q9BUL5 403 aaPredicted RBP15.36■□□□□ 0.05
ACTN1-210ENST00000553779 SLIT1O75093 1534 aa15.36■□□□□ 0.05
ACTN1-210ENST00000553779 EFCAB6Q5THR3 1501 aa15.36■□□□□ 0.05
ACTN1-210ENST00000553779 LRRC7Q96NW7 1537 aa15.36■□□□□ 0.05
ACTN1-210ENST00000553779 XIRP1Q702N8 1843 aaKnown RBP15.36■□□□□ 0.05
ACTN1-210ENST00000553779 ARHGAP23Q9P227 1491 aa15.33■□□□□ 0.05
ACTN1-210ENST00000553779 ADGRB3O60242 1522 aa15.33■□□□□ 0.04
ACTN1-210ENST00000553779 LMTK2Q8IWU2 1503 aa15.33■□□□□ 0.04
ACTN1-210ENST00000553779 GCC2Q8IWJ2 1684 aa15.32■□□□□ 0.04
ACTN1-210ENST00000553779 BCANQ96GW7 911 aa15.32■□□□□ 0.04
ACTN1-210ENST00000553779 TET3O43151 1660 aa15.31■□□□□ 0.04
ACTN1-210ENST00000553779 LTKP29376 864 aa15.3■□□□□ 0.04
ACTN1-210ENST00000553779 TMEM2Q9UHN6 1383 aa15.3■□□□□ 0.04
ACTN1-210ENST00000553779 ALKQ9UM73 1620 aa15.3■□□□□ 0.04
ACTN1-210ENST00000553779 ADGRL2O95490 1459 aa15.29■□□□□ 0.04
ACTN1-210ENST00000553779 ANKRD50Q9ULJ7 1429 aa15.27■□□□□ 0.04
ACTN1-210ENST00000553779 PPP1R15AO75807 674 aaPredicted RBP15.26■□□□□ 0.03
ACTN1-210ENST00000553779 RPRD2Q5VT52 1461 aaKnown RBP15.25■□□□□ 0.03
ACTN1-210ENST00000553779 UNC13BO14795 1591 aa15.24■□□□□ 0.03
ACTN1-210ENST00000553779 IDI1Q13907 227 aa15.24■□□□□ 0.03
ACTN1-210ENST00000553779 ROBO1Q9Y6N7 1651 aa15.23■□□□□ 0.03
ACTN1-210ENST00000553779 NOS1P29475 1434 aa15.23■□□□□ 0.03
ACTN1-210ENST00000553779 CHGAP10645 457 aaKnown RBP15.22■□□□□ 0.03
ACTN1-210ENST00000553779 SLC26A8Q96RN1 970 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms