RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 MYO3AQ8NEV4 1616 aa14.89□□□□□ -0.03
CHD8-203ENST00000553283 A2ML1A8K2U0 1454 aa14.89□□□□□ -0.03
CHD8-203ENST00000553283 ZNF142P52746 1687 aaPredicted RBP14.88□□□□□ -0.03
CHD8-203ENST00000553283 VPS8Q8N3P4 1428 aa14.88□□□□□ -0.03
CHD8-203ENST00000553283 TNRQ92752 1358 aa14.87□□□□□ -0.03
CHD8-203ENST00000553283 DISP3Q9P2K9 1392 aa14.87□□□□□ -0.03
CHD8-203ENST00000553283 LRRC9Q6ZRR7 1453 aa14.87□□□□□ -0.03
CHD8-203ENST00000553283 KANK4Q5T7N3 995 aaPredicted RBP14.86□□□□□ -0.03
CHD8-203ENST00000553283 PZPP20742 1482 aa14.86□□□□□ -0.03
CHD8-203ENST00000553283 ARHGEF5Q12774 1597 aa14.85□□□□□ -0.03
CHD8-203ENST00000553283 KDM5DQ9BY66 1539 aa14.85□□□□□ -0.03
CHD8-203ENST00000553283 FAM135AQ9P2D6 1515 aa14.85□□□□□ -0.03
CHD8-203ENST00000553283 UBAP1LF5GYI3 381 aa14.84□□□□□ -0.03
CHD8-203ENST00000553283 DNMT1P26358 1616 aaKnown RBP14.84□□□□□ -0.03
CHD8-203ENST00000553283 MIA2Q96PC5 1412 aa14.83□□□□□ -0.03
CHD8-203ENST00000553283 ANKLE2Q86XL3 938 aa14.83□□□□□ -0.04
CHD8-203ENST00000553283 THEMISQ8N1K5 641 aaPredicted RBP14.83□□□□□ -0.04
CHD8-203ENST00000553283 ILDR2Q71H61 639 aa14.82□□□□□ -0.04
CHD8-203ENST00000553283 MAP3K1Q13233 1512 aa14.81□□□□□ -0.04
CHD8-203ENST00000553283 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.8□□□□□ -0.04
CHD8-203ENST00000553283 MYOM3Q5VTT5 1437 aa14.79□□□□□ -0.04
CHD8-203ENST00000553283 NLRP1Q9C000 1473 aa14.79□□□□□ -0.04
CHD8-203ENST00000553283 MAST1Q9Y2H9 1570 aa14.77□□□□□ -0.04
CHD8-203ENST00000553283 SHANK2Q9UPX8 1470 aa14.76□□□□□ -0.05
CHD8-203ENST00000553283 SOCS7O14512 581 aa14.75□□□□□ -0.05
CHD8-203ENST00000553283 NEURL4Q96JN8 1562 aa14.75□□□□□ -0.05
CHD8-203ENST00000553283 UGGT1Q9NYU2 1555 aa14.75□□□□□ -0.05
CHD8-203ENST00000553283 ABCC3O15438 1527 aa14.75□□□□□ -0.05
CHD8-203ENST00000553283 RNF17Q9BXT8 1623 aaKnown RBP14.74□□□□□ -0.05
CHD8-203ENST00000553283 TOM1O60784 492 aa14.74□□□□□ -0.05
CHD8-203ENST00000553283 APLP2Q06481 763 aa14.74□□□□□ -0.05
CHD8-203ENST00000553283 NPHP4O75161 1426 aaPredicted RBP14.74□□□□□ -0.05
CHD8-203ENST00000553283 CPS1P31327 1500 aa14.73□□□□□ -0.05
CHD8-203ENST00000553283 MED14O60244 1454 aa14.73□□□□□ -0.05
CHD8-203ENST00000553283 SPATA31D1Q6ZQQ2 1576 aa14.73□□□□□ -0.05
CHD8-203ENST00000553283 RRP7BPQ9NSQ0 103 aa14.72□□□□□ -0.05
CHD8-203ENST00000553283 DUOX2Q9NRD8 1548 aa14.71□□□□□ -0.05
CHD8-203ENST00000553283 ERVK-7P63135 1459 aa14.71□□□□□ -0.05
CHD8-203ENST00000553283 EIF2AK4Q9P2K8 1649 aaKnown RBP14.71□□□□□ -0.05
CHD8-203ENST00000553283 PIP4K2BP78356 416 aa14.71□□□□□ -0.05
CHD8-203ENST00000553283 ABCC5O15440 1437 aa14.71□□□□□ -0.05
CHD8-203ENST00000553283 POLR1AO95602 1720 aaPredicted RBP14.71□□□□□ -0.05
CHD8-203ENST00000553283 KIF15Q9NS87 1388 aa14.71□□□□□ -0.06
CHD8-203ENST00000553283 SCAF1Q9H7N4 1312 aaKnown RBP14.7□□□□□ -0.06
CHD8-203ENST00000553283 DEPDC5O75140 1603 aa14.7□□□□□ -0.06
CHD8-203ENST00000553283 VWDEQ8N2E2 1590 aa14.69□□□□□ -0.06
CHD8-203ENST00000553283 ZC3H13Q5T200 1668 aaKnown RBP14.69□□□□□ -0.06
CHD8-203ENST00000553283 HSPA1LP34931 641 aa14.69□□□□□ -0.06
CHD8-203ENST00000553283 MROH1Q8NDA8 1641 aa14.69□□□□□ -0.06
CHD8-203ENST00000553283 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.68□□□□□ -0.069e-7■■□□□ 11.8
CHD8-203ENST00000553283 ARHGAP31Q2M1Z3 1444 aa14.67□□□□□ -0.06
CHD8-203ENST00000553283 ERBINQ96RT1 1412 aa14.67□□□□□ -0.06
CHD8-203ENST00000553283 LTKP29376 864 aa14.66□□□□□ -0.06
CHD8-203ENST00000553283 TXNDC2Q86VQ3 553 aa14.66□□□□□ -0.06
CHD8-203ENST00000553283 DAPK1P53355 1430 aa14.66□□□□□ -0.06
CHD8-203ENST00000553283 CHIC2Q9UKJ5 165 aa14.65□□□□□ -0.06
CHD8-203ENST00000553283 FGD6Q6ZV73 1430 aa14.65□□□□□ -0.06
CHD8-203ENST00000553283 PTPN23Q9H3S7 1636 aa14.64□□□□□ -0.07
CHD8-203ENST00000553283 IQGAP1P46940 1657 aa14.64□□□□□ -0.07
CHD8-203ENST00000553283 KANK1Q14678 1352 aa14.63□□□□□ -0.07
CHD8-203ENST00000553283 ANKRD30AQ9BXX3 1397 aa14.63□□□□□ -0.07
CHD8-203ENST00000553283 PRDM15P57071 1507 aaPredicted RBP14.63□□□□□ -0.07
CHD8-203ENST00000553283 EID1Q9Y6B2 187 aa14.63□□□□□ -0.07
CHD8-203ENST00000553283 SCAF11Q99590 1463 aaKnown RBP14.63□□□□□ -0.07
CHD8-203ENST00000553283 LRRC7Q96NW7 1537 aa14.62□□□□□ -0.07
CHD8-203ENST00000553283 CEP152O94986 1710 aa14.62□□□□□ -0.07
CHD8-203ENST00000553283 ARHGAP23Q9P227 1491 aa14.62□□□□□ -0.07
CHD8-203ENST00000553283 CFAP65Q6ZU64 1925 aaKnown RBP14.61□□□□□ -0.07
CHD8-203ENST00000553283 STAG3Q9UJ98 1225 aa14.61□□□□□ -0.07
CHD8-203ENST00000553283 SLIT1O75093 1534 aa14.61□□□□□ -0.07
CHD8-203ENST00000553283 IDI1Q13907 227 aa14.6□□□□□ -0.07
CHD8-203ENST00000553283 UBR1Q8IWV7 1749 aa14.6□□□□□ -0.07
CHD8-203ENST00000553283 TMEM2Q9UHN6 1383 aa14.6□□□□□ -0.07
CHD8-203ENST00000553283 ALKQ9UM73 1620 aa14.59□□□□□ -0.07
CHD8-203ENST00000553283 CROCC2H7BZ55 1655 aa14.58□□□□□ -0.07
CHD8-203ENST00000553283 LMTK2Q8IWU2 1503 aa14.57□□□□□ -0.08
CHD8-203ENST00000553283 STRCP1A6NGW2 1772 aa14.57□□□□□ -0.08
CHD8-203ENST00000553283 FAM50AQ14320 339 aaKnown RBP14.56□□□□□ -0.08
CHD8-203ENST00000553283 SLC52A1Q9NWF4 448 aa14.55□□□□□ -0.08
CHD8-203ENST00000553283 SENP3Q9H4L4 574 aaPredicted RBP14.54□□□□□ -0.08
CHD8-203ENST00000553283 NOS1P29475 1434 aa14.54□□□□□ -0.08
CHD8-203ENST00000553283 SYNMO15061 1565 aa14.54□□□□□ -0.08
CHD8-203ENST00000553283 PIK3C2BO00750 1634 aa14.53□□□□□ -0.08
CHD8-203ENST00000553283 MED1Q15648 1581 aaPredicted RBP14.53□□□□□ -0.08
CHD8-203ENST00000553283 ADGRL2O95490 1459 aa14.53□□□□□ -0.08
CHD8-203ENST00000553283 KCNA6P17658 529 aa14.53□□□□□ -0.08
CHD8-203ENST00000553283 EFCAB6Q5THR3 1501 aa14.52□□□□□ -0.08
CHD8-203ENST00000553283 SLC26A8Q96RN1 970 aa14.52□□□□□ -0.09
CHD8-203ENST00000553283 ANKRD50Q9ULJ7 1429 aa14.51□□□□□ -0.09
CHD8-203ENST00000553283 PHF23Q9BUL5 403 aaPredicted RBP14.51□□□□□ -0.09
CHD8-203ENST00000553283 TMEM94Q12767 1356 aa14.49□□□□□ -0.09
CHD8-203ENST00000553283 KDM5AP29375 1690 aaKnown RBP14.49□□□□□ -0.09
CHD8-203ENST00000553283 PROSER2Q86WR7 435 aaPredicted RBP14.49□□□□□ -0.09
CHD8-203ENST00000553283 BCANQ96GW7 911 aa14.48□□□□□ -0.09
CHD8-203ENST00000553283 TET3O43151 1660 aa14.48□□□□□ -0.09
CHD8-203ENST00000553283 RPRD2Q5VT52 1461 aaKnown RBP14.47□□□□□ -0.09
CHD8-203ENST00000553283 HDGFP51858 240 aaKnown RBP14.47□□□□□ -0.09
CHD8-203ENST00000553283 FAM135BQ49AJ0 1406 aa14.47□□□□□ -0.09
CHD8-203ENST00000553283 ADGRB3O60242 1522 aa14.46□□□□□ -0.1
CHD8-203ENST00000553283 RBM33Q96EV2 1170 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms