RNA–Protein interactions for RNA: ENST00000551567.1

TROAP-216, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-216ENST00000551567 KDM5DQ9BY66 1539 aa36.31■■■■□ 3.4
TROAP-216ENST00000551567 CEP170BQ9Y4F5 1589 aaPredicted RBP36.31■■■■□ 3.4
TROAP-216ENST00000551567 PTPRTO14522 1441 aa36.29■■■■□ 3.4
TROAP-216ENST00000551567 FAM135AQ9P2D6 1515 aa36.28■■■■□ 3.4
TROAP-216ENST00000551567 PTPN23Q9H3S7 1636 aa36.23■■■■□ 3.39
TROAP-216ENST00000551567 RNF17Q9BXT8 1623 aaKnown RBP36.22■■■■□ 3.39
TROAP-216ENST00000551567 CROCC2H7BZ55 1655 aa36.21■■■■□ 3.39
TROAP-216ENST00000551567 WASHC2CQ9Y4E1 1318 aa36.2■■■■□ 3.39
TROAP-216ENST00000551567 EIF2AK4Q9P2K8 1649 aaKnown RBP36.19■■■■□ 3.38
TROAP-216ENST00000551567 PZPP20742 1482 aa36.19■■■■□ 3.38
TROAP-216ENST00000551567 FBXO31Q5XUX0 539 aaPredicted RBP36.16■■■■□ 3.38
TROAP-216ENST00000551567 A2ML1A8K2U0 1454 aa36.16■■■■□ 3.38
TROAP-216ENST00000551567 PLA2R1Q13018 1463 aa36.16■■■■□ 3.38
TROAP-216ENST00000551567 NCKAP5LQ9HCH0 1330 aa36.15■■■■□ 3.38
TROAP-216ENST00000551567 DNMT1P26358 1616 aaKnown RBP36.14■■■■□ 3.38
TROAP-216ENST00000551567 TNRQ92752 1358 aa36.14■■■■□ 3.38
TROAP-216ENST00000551567 ZC3H13Q5T200 1668 aaKnown RBP36.13■■■■□ 3.37
TROAP-216ENST00000551567 FGD6Q6ZV73 1430 aa36.12■■■■□ 3.37
TROAP-216ENST00000551567 DUOX2Q9NRD8 1548 aa36.11■■■■□ 3.37
TROAP-216ENST00000551567 MROH1Q8NDA8 1641 aa36.11■■■■□ 3.37
TROAP-216ENST00000551567 SHANK2Q9UPX8 1470 aa36.11■■■■□ 3.37
TROAP-216ENST00000551567 ABCC5O15440 1437 aa36.1■■■■□ 3.37
TROAP-216ENST00000551567 ABCC3O15438 1527 aa36.1■■■■□ 3.37
TROAP-216ENST00000551567 TCOF1Q13428 1488 aaKnown RBP36.1■■■■□ 3.37
TROAP-216ENST00000551567 LTBP4Q8N2S1 1624 aa36.08■■■■□ 3.37
TROAP-216ENST00000551567 CEP152O94986 1710 aa36.07■■■■□ 3.36
TROAP-216ENST00000551567 DAPK1P53355 1430 aa36.06■■■■□ 3.36
TROAP-216ENST00000551567 KIF15Q9NS87 1388 aa36.05■■■■□ 3.36
TROAP-216ENST00000551567 PKD2Q13563 968 aa36.05■■■■□ 3.36
TROAP-216ENST00000551567 POLR1AO95602 1720 aaPredicted RBP36.02■■■■□ 3.36
TROAP-216ENST00000551567 RRP7BPQ9NSQ0 103 aa35.98■■■■□ 3.35
TROAP-216ENST00000551567 NLRP1Q9C000 1473 aa35.98■■■■□ 3.35
TROAP-216ENST00000551567 ERBINQ96RT1 1412 aa35.97■■■■□ 3.35
TROAP-216ENST00000551567 SPATA31D1Q6ZQQ2 1576 aa35.95■■■■□ 3.35
TROAP-216ENST00000551567 PRDM15P57071 1507 aaPredicted RBP35.95■■■■□ 3.35
TROAP-216ENST00000551567 ZNF335Q9H4Z2 1342 aaPredicted RBP35.94■■■■□ 3.34
TROAP-216ENST00000551567 CFAP65Q6ZU64 1925 aaKnown RBP35.94■■■■□ 3.34
TROAP-216ENST00000551567 UGGT1Q9NYU2 1555 aa35.93■■■■□ 3.34
TROAP-216ENST00000551567 NEURL4Q96JN8 1562 aa35.93■■■■□ 3.34
TROAP-216ENST00000551567 ERVK-7P63135 1459 aa35.92■■■■□ 3.34
TROAP-216ENST00000551567 CHIC2Q9UKJ5 165 aa35.91■■■■□ 3.34
TROAP-216ENST00000551567 DEPDC5O75140 1603 aa35.9■■■■□ 3.34
TROAP-216ENST00000551567 IQSEC2Q5JU85 1478 aa35.89■■■■□ 3.34
TROAP-216ENST00000551567 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.89■■■■□ 3.34
TROAP-216ENST00000551567 ANKRD30AQ9BXX3 1397 aa35.88■■■■□ 3.33
TROAP-216ENST00000551567 FAM50AQ14320 339 aaKnown RBP35.84■■■■□ 3.33
TROAP-216ENST00000551567 THEMISQ8N1K5 641 aaPredicted RBP35.84■■■■□ 3.33
TROAP-216ENST00000551567 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.83■■■■□ 3.333e-6■■■■□ 20.1
TROAP-216ENST00000551567 ANKLE2Q86XL3 938 aa35.8■■■■□ 3.32
TROAP-216ENST00000551567 ADGRL2O95490 1459 aa35.78■■■■□ 3.32
TROAP-216ENST00000551567 KANK1Q14678 1352 aa35.77■■■■□ 3.32
TROAP-216ENST00000551567 UBR1Q8IWV7 1749 aa35.77■■■■□ 3.32
TROAP-216ENST00000551567 ARHGAP31Q2M1Z3 1444 aa35.77■■■■□ 3.32
TROAP-216ENST00000551567 NPHP4O75161 1426 aaPredicted RBP35.73■■■■□ 3.31
TROAP-216ENST00000551567 IQGAP1P46940 1657 aa35.72■■■■□ 3.31
TROAP-216ENST00000551567 MED14O60244 1454 aa35.72■■■■□ 3.31
TROAP-216ENST00000551567 VWDEQ8N2E2 1590 aa35.72■■■■□ 3.31
TROAP-216ENST00000551567 LMTK2Q8IWU2 1503 aa35.68■■■■□ 3.3
TROAP-216ENST00000551567 PIK3C2BO00750 1634 aa35.65■■■■□ 3.3
TROAP-216ENST00000551567 CPS1P31327 1500 aa35.64■■■■□ 3.3
TROAP-216ENST00000551567 EFCAB6Q5THR3 1501 aa35.63■■■■□ 3.29
TROAP-216ENST00000551567 UBAP1LF5GYI3 381 aa35.63■■■■□ 3.29
TROAP-216ENST00000551567 ANKRD50Q9ULJ7 1429 aa35.63■■■■□ 3.29
TROAP-216ENST00000551567 SCAF11Q99590 1463 aaKnown RBP35.58■■■■□ 3.29
TROAP-216ENST00000551567 SYNMO15061 1565 aa35.58■■■■□ 3.29
TROAP-216ENST00000551567 SLIT1O75093 1534 aa35.57■■■■□ 3.29
TROAP-216ENST00000551567 ARHGAP23Q9P227 1491 aa35.57■■■■□ 3.28
TROAP-216ENST00000551567 PPARGC1BQ86YN6 1023 aaKnown RBP35.57■■■■□ 3.28
TROAP-216ENST00000551567 STRCP1A6NGW2 1772 aa35.54■■■■□ 3.28
TROAP-216ENST00000551567 KDM5AP29375 1690 aaKnown RBP35.52■■■■□ 3.28
TROAP-216ENST00000551567 TET3O43151 1660 aa35.5■■■■□ 3.27
TROAP-216ENST00000551567 LTKP29376 864 aa35.5■■■■□ 3.27
TROAP-216ENST00000551567 UNC13BO14795 1591 aa35.5■■■■□ 3.27
TROAP-216ENST00000551567 NOS1P29475 1434 aa35.49■■■■□ 3.27
TROAP-216ENST00000551567 TXNDC2Q86VQ3 553 aa35.49■■■■□ 3.27
TROAP-216ENST00000551567 STAG3Q9UJ98 1225 aa35.49■■■■□ 3.27
TROAP-216ENST00000551567 IDI1Q13907 227 aa35.46■■■■□ 3.27
TROAP-216ENST00000551567 TMEM2Q9UHN6 1383 aa35.46■■■■□ 3.27
TROAP-216ENST00000551567 GCC2Q8IWJ2 1684 aa35.46■■■■□ 3.27
TROAP-216ENST00000551567 ROCK1Q13464 1354 aa35.45■■■■□ 3.27
TROAP-216ENST00000551567 ADGRB3O60242 1522 aa35.44■■■■□ 3.26
TROAP-216ENST00000551567 RPRD2Q5VT52 1461 aaKnown RBP35.44■■■■□ 3.26
TROAP-216ENST00000551567 ITGAEP38570 1179 aa35.44■■■■□ 3.26
TROAP-216ENST00000551567 EID1Q9Y6B2 187 aa35.44■■■■□ 3.26
TROAP-216ENST00000551567 SCAF1Q9H7N4 1312 aaKnown RBP35.41■■■■□ 3.26
TROAP-216ENST00000551567 DISP3Q9P2K9 1392 aa35.4■■■■□ 3.26
TROAP-216ENST00000551567 LRRC7Q96NW7 1537 aa35.39■■■■□ 3.26
TROAP-216ENST00000551567 TOM1O60784 492 aa35.37■■■■□ 3.25
TROAP-216ENST00000551567 PIP4K2BP78356 416 aa35.37■■■■□ 3.25
TROAP-216ENST00000551567 MYO5BQ9ULV0 1848 aa35.36■■■■□ 3.25
TROAP-216ENST00000551567 E9PCH4 1651 aa35.36■■■■□ 3.25
TROAP-216ENST00000551567 IQGAP3Q86VI3 1631 aa35.35■■■■□ 3.25
TROAP-216ENST00000551567 SLC52A1Q9NWF4 448 aa35.34■■■■□ 3.25
TROAP-216ENST00000551567 ALKQ9UM73 1620 aa35.33■■■■□ 3.25
TROAP-216ENST00000551567 XIRP1Q702N8 1843 aaKnown RBP35.27■■■■□ 3.24
TROAP-216ENST00000551567 TMEM131LA2VDJ0 1609 aa35.26■■■■□ 3.24
TROAP-216ENST00000551567 NUP155O75694 1391 aa35.25■■■■□ 3.23
TROAP-216ENST00000551567 HSPA1LP34931 641 aa35.24■■■■□ 3.23
TROAP-216ENST00000551567 SLC26A8Q96RN1 970 aa35.21■■■■□ 3.23
TROAP-216ENST00000551567 RRBP1Q9P2E9 1410 aaKnown RBP35.21■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms