RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 FAM135AQ9P2D6 1515 aa20.5■□□□□ 0.87
NPAS3-209ENST00000551008 ILDR1Q86SU0 546 aaPredicted RBP20.5■□□□□ 0.87
NPAS3-209ENST00000551008 KDM5DQ9BY66 1539 aa20.49■□□□□ 0.87
NPAS3-209ENST00000551008 SHANK2Q9UPX8 1470 aa20.49■□□□□ 0.87
NPAS3-209ENST00000551008 KIF3BO15066 747 aa20.48■□□□□ 0.87
NPAS3-209ENST00000551008 PPP6R1Q9UPN7 881 aa20.47■□□□□ 0.87
NPAS3-209ENST00000551008 TSPY4P0CV99 314 aa20.46■□□□□ 0.87
NPAS3-209ENST00000551008 TSPY10P0CW01 314 aa20.46■□□□□ 0.87
NPAS3-209ENST00000551008 APLP2Q06481 763 aa20.46■□□□□ 0.87
NPAS3-209ENST00000551008 CEP170BQ9Y4F5 1589 aaPredicted RBP20.46■□□□□ 0.87
NPAS3-209ENST00000551008 DAPK1P53355 1430 aa20.45■□□□□ 0.86
NPAS3-209ENST00000551008 CEP152O94986 1710 aa20.44■□□□□ 0.86
NPAS3-209ENST00000551008 NCOA1Q15788 1441 aa20.44■□□□□ 0.86
NPAS3-209ENST00000551008 ABCC3O15438 1527 aa20.43■□□□□ 0.86
NPAS3-209ENST00000551008 DUOX2Q9NRD8 1548 aa20.43■□□□□ 0.86
NPAS3-209ENST00000551008 CAMSAP1Q5T5Y3 1602 aa20.43■□□□□ 0.86
NPAS3-209ENST00000551008 ZC3H13Q5T200 1668 aaKnown RBP20.43■□□□□ 0.86
NPAS3-209ENST00000551008 PZPP20742 1482 aa20.43■□□□□ 0.86
NPAS3-209ENST00000551008 DEPDC5O75140 1603 aa20.4■□□□□ 0.86
NPAS3-209ENST00000551008 PRDM15P57071 1507 aaPredicted RBP20.38■□□□□ 0.85
NPAS3-209ENST00000551008 KIF15Q9NS87 1388 aa20.38■□□□□ 0.85
NPAS3-209ENST00000551008 FBXO31Q5XUX0 539 aaPredicted RBP20.37■□□□□ 0.85
NPAS3-209ENST00000551008 PTPRTO14522 1441 aa20.36■□□□□ 0.85
NPAS3-209ENST00000551008 A2ML1A8K2U0 1454 aa20.36■□□□□ 0.85
NPAS3-209ENST00000551008 ERBINQ96RT1 1412 aa20.36■□□□□ 0.85
NPAS3-209ENST00000551008 CFAP65Q6ZU64 1925 aaKnown RBP20.35■□□□□ 0.85
NPAS3-209ENST00000551008 ADGRL2O95490 1459 aa20.35■□□□□ 0.85
NPAS3-209ENST00000551008 PLA2R1Q13018 1463 aa20.35■□□□□ 0.85
NPAS3-209ENST00000551008 SPATA31D1Q6ZQQ2 1576 aa20.34■□□□□ 0.85
NPAS3-209ENST00000551008 WASHC2CQ9Y4E1 1318 aa20.34■□□□□ 0.85
NPAS3-209ENST00000551008 TNRQ92752 1358 aa20.34■□□□□ 0.85
NPAS3-209ENST00000551008 RRP7BPQ9NSQ0 103 aa20.32■□□□□ 0.84
NPAS3-209ENST00000551008 LTBP4Q8N2S1 1624 aa20.31■□□□□ 0.84
NPAS3-209ENST00000551008 POLR1AO95602 1720 aaPredicted RBP20.31■□□□□ 0.84
NPAS3-209ENST00000551008 VWDEQ8N2E2 1590 aa20.31■□□□□ 0.84
NPAS3-209ENST00000551008 ERVK-7P63135 1459 aa20.3■□□□□ 0.84
NPAS3-209ENST00000551008 FBXO41Q8TF61 875 aa20.3■□□□□ 0.84
NPAS3-209ENST00000551008 NEURL4Q96JN8 1562 aa20.29■□□□□ 0.84
NPAS3-209ENST00000551008 CHIC2Q9UKJ5 165 aa20.28■□□□□ 0.84
NPAS3-209ENST00000551008 NCKAP5LQ9HCH0 1330 aa20.27■□□□□ 0.84
NPAS3-209ENST00000551008 ANKRD30AQ9BXX3 1397 aa20.27■□□□□ 0.84
NPAS3-209ENST00000551008 DMRT2Q9Y5R5 561 aa20.27■□□□□ 0.84
NPAS3-209ENST00000551008 NLRP1Q9C000 1473 aa20.26■□□□□ 0.83
NPAS3-209ENST00000551008 CERKQ8TCT0 537 aa20.26■□□□□ 0.83
NPAS3-209ENST00000551008 LMTK2Q8IWU2 1503 aa20.24■□□□□ 0.83
NPAS3-209ENST00000551008 FAM50AQ14320 339 aaKnown RBP20.24■□□□□ 0.83
NPAS3-209ENST00000551008 ARHGAP31Q2M1Z3 1444 aa20.24■□□□□ 0.83
NPAS3-209ENST00000551008 UBR1Q8IWV7 1749 aa20.24■□□□□ 0.83
NPAS3-209ENST00000551008 UGGT1Q9NYU2 1555 aa20.23■□□□□ 0.83
NPAS3-209ENST00000551008 PPARGC1BQ86YN6 1023 aaKnown RBP20.21■□□□□ 0.83
NPAS3-209ENST00000551008 EFCAB6Q5THR3 1501 aa20.19■□□□□ 0.82
NPAS3-209ENST00000551008 PKD2Q13563 968 aa20.19■□□□□ 0.82
NPAS3-209ENST00000551008 UNC13BO14795 1591 aa20.18■□□□□ 0.82
NPAS3-209ENST00000551008 SYNMO15061 1565 aa20.18■□□□□ 0.82
NPAS3-209ENST00000551008 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.18■□□□□ 0.82
NPAS3-209ENST00000551008 ANKRD50Q9ULJ7 1429 aa20.18■□□□□ 0.82
NPAS3-209ENST00000551008 PIK3C2BO00750 1634 aa20.16■□□□□ 0.82
NPAS3-209ENST00000551008 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.16■□□□□ 0.82
NPAS3-209ENST00000551008 ZNF335Q9H4Z2 1342 aaPredicted RBP20.16■□□□□ 0.82
NPAS3-209ENST00000551008 MED14O60244 1454 aa20.14■□□□□ 0.81
NPAS3-209ENST00000551008 TET3O43151 1660 aa20.13■□□□□ 0.81
NPAS3-209ENST00000551008 ROCK1Q13464 1354 aa20.13■□□□□ 0.81
NPAS3-209ENST00000551008 IQGAP1P46940 1657 aa20.13■□□□□ 0.81
NPAS3-209ENST00000551008 KANK1Q14678 1352 aa20.12■□□□□ 0.81
NPAS3-209ENST00000551008 GCC2Q8IWJ2 1684 aa20.12■□□□□ 0.81
NPAS3-209ENST00000551008 IQSEC2Q5JU85 1478 aa20.11■□□□□ 0.81
NPAS3-209ENST00000551008 ARHGAP23Q9P227 1491 aa20.11■□□□□ 0.81
NPAS3-209ENST00000551008 NOS1P29475 1434 aa20.11■□□□□ 0.81
NPAS3-209ENST00000551008 KDM5AP29375 1690 aaKnown RBP20.11■□□□□ 0.81
NPAS3-209ENST00000551008 FOXD1Q16676 465 aa20.11■□□□□ 0.81
NPAS3-209ENST00000551008 STRCP1A6NGW2 1772 aa20.11■□□□□ 0.81
NPAS3-209ENST00000551008 RRBP1Q9P2E9 1410 aaKnown RBP20.1■□□□□ 0.81
NPAS3-209ENST00000551008 THEMISQ8N1K5 641 aaPredicted RBP20.1■□□□□ 0.81
NPAS3-209ENST00000551008 SLIT1O75093 1534 aa20.1■□□□□ 0.81
NPAS3-209ENST00000551008 IQGAP3Q86VI3 1631 aa20.09■□□□□ 0.81
NPAS3-209ENST00000551008 E9PCH4 1651 aa20.08■□□□□ 0.81
NPAS3-209ENST00000551008 NPHP4O75161 1426 aaPredicted RBP20.08■□□□□ 0.8
NPAS3-209ENST00000551008 MYO5BQ9ULV0 1848 aa20.07■□□□□ 0.8
NPAS3-209ENST00000551008 ANKLE2Q86XL3 938 aa20.06■□□□□ 0.8
NPAS3-209ENST00000551008 RPRD2Q5VT52 1461 aaKnown RBP20.05■□□□□ 0.8
NPAS3-209ENST00000551008 SCAF11Q99590 1463 aaKnown RBP20.04■□□□□ 0.8
NPAS3-209ENST00000551008 ADGRB3O60242 1522 aa20.03■□□□□ 0.8
NPAS3-209ENST00000551008 LTKP29376 864 aa20.01■□□□□ 0.79
NPAS3-209ENST00000551008 ITGAEP38570 1179 aa20.01■□□□□ 0.79
NPAS3-209ENST00000551008 IDI1Q13907 227 aa20.01■□□□□ 0.79
NPAS3-209ENST00000551008 CPS1P31327 1500 aa20■□□□□ 0.79
NPAS3-209ENST00000551008 TMEM131LA2VDJ0 1609 aa19.98■□□□□ 0.79
NPAS3-209ENST00000551008 TMEM2Q9UHN6 1383 aa19.98■□□□□ 0.79
NPAS3-209ENST00000551008 ALKQ9UM73 1620 aa19.98■□□□□ 0.79
NPAS3-209ENST00000551008 XIRP1Q702N8 1843 aaKnown RBP19.96■□□□□ 0.79
NPAS3-209ENST00000551008 NAIPQ13075 1403 aa19.95■□□□□ 0.78
NPAS3-209ENST00000551008 TXNDC2Q86VQ3 553 aa19.93■□□□□ 0.78
NPAS3-209ENST00000551008 SPHKAPQ2M3C7 1700 aa19.93■□□□□ 0.78
NPAS3-209ENST00000551008 ZFYVE9O95405 1425 aa19.93■□□□□ 0.78
NPAS3-209ENST00000551008 NUP155O75694 1391 aa19.92■□□□□ 0.78
NPAS3-209ENST00000551008 LRRC7Q96NW7 1537 aa19.92■□□□□ 0.78
NPAS3-209ENST00000551008 SLC52A1Q9NWF4 448 aa19.9■□□□□ 0.78
NPAS3-209ENST00000551008 HFM1A2PYH4 1435 aa19.86■□□□□ 0.77
NPAS3-209ENST00000551008 UBAP1LF5GYI3 381 aa19.86■□□□□ 0.77
NPAS3-209ENST00000551008 STAG3Q9UJ98 1225 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms