RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 CROCC2H7BZ55 1655 aa17.36■□□□□ 0.37
PFDN5-210ENST00000550513 TCOF1Q13428 1488 aaKnown RBP17.34■□□□□ 0.37
PFDN5-210ENST00000550513 DHX29Q7Z478 1369 aaKnown RBP17.34■□□□□ 0.37
PFDN5-210ENST00000550513 A2ML1A8K2U0 1454 aa17.33■□□□□ 0.37
PFDN5-210ENST00000550513 CEP152O94986 1710 aa17.33■□□□□ 0.36
PFDN5-210ENST00000550513 PPP6R1Q9UPN7 881 aa17.32■□□□□ 0.36
PFDN5-210ENST00000550513 MAP3K1Q13233 1512 aa17.31■□□□□ 0.36
PFDN5-210ENST00000550513 PZPP20742 1482 aa17.31■□□□□ 0.36
PFDN5-210ENST00000550513 NEURL4Q96JN8 1562 aa17.29■□□□□ 0.36
PFDN5-210ENST00000550513 SPATA31D1Q6ZQQ2 1576 aa17.28■□□□□ 0.36
PFDN5-210ENST00000550513 NCKAP5LQ9HCH0 1330 aa17.27■□□□□ 0.36
PFDN5-210ENST00000550513 RSPH4AQ5TD94 716 aa17.27■□□□□ 0.36
PFDN5-210ENST00000550513 MROH1Q8NDA8 1641 aa17.26■□□□□ 0.35
PFDN5-210ENST00000550513 CFAP65Q6ZU64 1925 aaKnown RBP17.26■□□□□ 0.35
PFDN5-210ENST00000550513 KIF3BO15066 747 aa17.26■□□□□ 0.35
PFDN5-210ENST00000550513 MYOM3Q5VTT5 1437 aa17.25■□□□□ 0.35
PFDN5-210ENST00000550513 PKD2Q13563 968 aa17.25■□□□□ 0.35
PFDN5-210ENST00000550513 ABCC3O15438 1527 aa17.25■□□□□ 0.35
PFDN5-210ENST00000550513 TNRQ92752 1358 aa17.25■□□□□ 0.35
PFDN5-210ENST00000550513 DEPDC5O75140 1603 aa17.23■□□□□ 0.35
PFDN5-210ENST00000550513 PTPN23Q9H3S7 1636 aa17.23■□□□□ 0.35
PFDN5-210ENST00000550513 NLRP1Q9C000 1473 aa17.23■□□□□ 0.35
PFDN5-210ENST00000550513 UGGT1Q9NYU2 1555 aa17.23■□□□□ 0.35
PFDN5-210ENST00000550513 IQGAP1P46940 1657 aa17.23■□□□□ 0.35
PFDN5-210ENST00000550513 ZNF335Q9H4Z2 1342 aaPredicted RBP17.22■□□□□ 0.35
PFDN5-210ENST00000550513 MIA2Q96PC5 1412 aa17.22■□□□□ 0.35
PFDN5-210ENST00000550513 TSPY4P0CV99 314 aa17.21■□□□□ 0.35
PFDN5-210ENST00000550513 TSPY10P0CW01 314 aa17.21■□□□□ 0.35
PFDN5-210ENST00000550513 UBR1Q8IWV7 1749 aa17.21■□□□□ 0.35
PFDN5-210ENST00000550513 DUOX2Q9NRD8 1548 aa17.21■□□□□ 0.34
PFDN5-210ENST00000550513 WASHC2CQ9Y4E1 1318 aa17.21■□□□□ 0.34
PFDN5-210ENST00000550513 LOC105371045A0A1W2PR82 267 aa17.2■□□□□ 0.34
PFDN5-210ENST00000550513 PRDM15P57071 1507 aaPredicted RBP17.2■□□□□ 0.34
PFDN5-210ENST00000550513 SHANK2Q9UPX8 1470 aa17.18■□□□□ 0.34
PFDN5-210ENST00000550513 CPS1P31327 1500 aa17.18■□□□□ 0.34
PFDN5-210ENST00000550513 FBXO31Q5XUX0 539 aaPredicted RBP17.18■□□□□ 0.34
PFDN5-210ENST00000550513 KANK4Q5T7N3 995 aaPredicted RBP17.17■□□□□ 0.34
PFDN5-210ENST00000550513 DISP3Q9P2K9 1392 aa17.16■□□□□ 0.34
PFDN5-210ENST00000550513 VWDEQ8N2E2 1590 aa17.16■□□□□ 0.34
PFDN5-210ENST00000550513 ERVK-7P63135 1459 aa17.16■□□□□ 0.34
PFDN5-210ENST00000550513 STRCP1A6NGW2 1772 aa17.15■□□□□ 0.34
PFDN5-210ENST00000550513 SYNMO15061 1565 aa17.15■□□□□ 0.34
PFDN5-210ENST00000550513 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.14■□□□□ 0.33
PFDN5-210ENST00000550513 MED14O60244 1454 aa17.13■□□□□ 0.33
PFDN5-210ENST00000550513 ERBINQ96RT1 1412 aa17.13■□□□□ 0.33
PFDN5-210ENST00000550513 NPHP4O75161 1426 aaPredicted RBP17.11■□□□□ 0.33
PFDN5-210ENST00000550513 UBAP1LF5GYI3 381 aa17.1■□□□□ 0.33
PFDN5-210ENST00000550513 KIF15Q9NS87 1388 aa17.1■□□□□ 0.33
PFDN5-210ENST00000550513 DAPK1P53355 1430 aa17.1■□□□□ 0.33
PFDN5-210ENST00000550513 PIK3C2BO00750 1634 aa17.1■□□□□ 0.33
PFDN5-210ENST00000550513 KDM5AP29375 1690 aaKnown RBP17.1■□□□□ 0.33
PFDN5-210ENST00000550513 ABCC5O15440 1437 aa17.09■□□□□ 0.33
PFDN5-210ENST00000550513 FGD6Q6ZV73 1430 aa17.09■□□□□ 0.33
PFDN5-210ENST00000550513 THEMISQ8N1K5 641 aaPredicted RBP17.08■□□□□ 0.32
PFDN5-210ENST00000550513 ANKLE2Q86XL3 938 aa17.07■□□□□ 0.32
PFDN5-210ENST00000550513 APLP2Q06481 763 aa17.06■□□□□ 0.32
PFDN5-210ENST00000550513 XIRP1Q702N8 1843 aaKnown RBP17.05■□□□□ 0.32
PFDN5-210ENST00000550513 ARHGAP31Q2M1Z3 1444 aa17.04■□□□□ 0.32
PFDN5-210ENST00000550513 SLIT1O75093 1534 aa17.04■□□□□ 0.32
PFDN5-210ENST00000550513 ALKQ9UM73 1620 aa17.03■□□□□ 0.32
PFDN5-210ENST00000550513 SCAF11Q99590 1463 aaKnown RBP17.03■□□□□ 0.32
PFDN5-210ENST00000550513 EFCAB6Q5THR3 1501 aa17.02■□□□□ 0.32
PFDN5-210ENST00000550513 LMTK2Q8IWU2 1503 aa17.02■□□□□ 0.32
PFDN5-210ENST00000550513 ARHGAP23Q9P227 1491 aa17.02■□□□□ 0.32
PFDN5-210ENST00000550513 ILDR2Q71H61 639 aa17.02■□□□□ 0.32
PFDN5-210ENST00000550513 MYO5BQ9ULV0 1848 aa17.01■□□□□ 0.31
PFDN5-210ENST00000550513 MED1Q15648 1581 aaPredicted RBP17.01■□□□□ 0.31
PFDN5-210ENST00000550513 SCAF1Q9H7N4 1312 aaKnown RBP17■□□□□ 0.31
PFDN5-210ENST00000550513 GCC2Q8IWJ2 1684 aa17■□□□□ 0.31
PFDN5-210ENST00000550513 RRP7BPQ9NSQ0 103 aa16.99■□□□□ 0.31
PFDN5-210ENST00000550513 LRRC7Q96NW7 1537 aa16.99■□□□□ 0.31
PFDN5-210ENST00000550513 KANK1Q14678 1352 aa16.99■□□□□ 0.31
PFDN5-210ENST00000550513 ANKRD30AQ9BXX3 1397 aa16.99■□□□□ 0.31
PFDN5-210ENST00000550513 ADGRL2O95490 1459 aa16.99■□□□□ 0.31
PFDN5-210ENST00000550513 TET3O43151 1660 aa16.97■□□□□ 0.31
PFDN5-210ENST00000550513 ADGRB3O60242 1522 aa16.97■□□□□ 0.31
PFDN5-210ENST00000550513 TOM1O60784 492 aa16.97■□□□□ 0.31
PFDN5-210ENST00000550513 PIP4K2BP78356 416 aa16.96■□□□□ 0.31
PFDN5-210ENST00000550513 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.95■□□□□ 0.34e-10■■□□□ 12.1
PFDN5-210ENST00000550513 UNC13BO14795 1591 aa16.94■□□□□ 0.3
PFDN5-210ENST00000550513 SOCS7O14512 581 aa16.94■□□□□ 0.3
PFDN5-210ENST00000550513 HSPA1LP34931 641 aa16.92■□□□□ 0.3
PFDN5-210ENST00000550513 CHIC2Q9UKJ5 165 aa16.92■□□□□ 0.3
PFDN5-210ENST00000550513 RPRD2Q5VT52 1461 aaKnown RBP16.9■□□□□ 0.3
PFDN5-210ENST00000550513 TMEM2Q9UHN6 1383 aa16.89■□□□□ 0.3
PFDN5-210ENST00000550513 NWD1Q149M9 1564 aa16.89■□□□□ 0.3
PFDN5-210ENST00000550513 NOS1P29475 1434 aa16.89■□□□□ 0.29
PFDN5-210ENST00000550513 E9PCH4 1651 aa16.89■□□□□ 0.29
PFDN5-210ENST00000550513 LTKP29376 864 aa16.88■□□□□ 0.29
PFDN5-210ENST00000550513 TXNDC2Q86VQ3 553 aa16.88■□□□□ 0.29
PFDN5-210ENST00000550513 EID1Q9Y6B2 187 aa16.88■□□□□ 0.29
PFDN5-210ENST00000550513 IQGAP3Q86VI3 1631 aa16.88■□□□□ 0.29
PFDN5-210ENST00000550513 ANKRD50Q9ULJ7 1429 aa16.87■□□□□ 0.29
PFDN5-210ENST00000550513 STAG3Q9UJ98 1225 aa16.87■□□□□ 0.29
PFDN5-210ENST00000550513 TMEM131LA2VDJ0 1609 aa16.86■□□□□ 0.29
PFDN5-210ENST00000550513 FAM50AQ14320 339 aaKnown RBP16.86■□□□□ 0.29
PFDN5-210ENST00000550513 CHD2O14647 1828 aaKnown RBP16.86■□□□□ 0.29
PFDN5-210ENST00000550513 ROBO1Q9Y6N7 1651 aa16.84■□□□□ 0.29
PFDN5-210ENST00000550513 NKTRP30414 1462 aaKnown RBP16.83■□□□□ 0.28
PFDN5-210ENST00000550513 IDI1Q13907 227 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms