RNA–Protein interactions for RNA: ENST00000549047.5

ARFGAP1-221, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 5

Gene ARFGAP1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-221ENST00000549047 SHANK2Q9UPX8 1470 aa23.63■■□□□ 1.37
ARFGAP1-221ENST00000549047 STRCQ7RTU9 1775 aa23.62■■□□□ 1.37
ARFGAP1-221ENST00000549047 DAPK1P53355 1430 aa23.61■■□□□ 1.37
ARFGAP1-221ENST00000549047 NCOA1Q15788 1441 aa23.6■■□□□ 1.37
ARFGAP1-221ENST00000549047 KIF15Q9NS87 1388 aa23.6■■□□□ 1.37
ARFGAP1-221ENST00000549047 MYO3AQ8NEV4 1616 aa23.59■■□□□ 1.37
ARFGAP1-221ENST00000549047 FBXO31Q5XUX0 539 aaPredicted RBP23.59■■□□□ 1.37
ARFGAP1-221ENST00000549047 FBXO41Q8TF61 875 aa23.59■■□□□ 1.37
ARFGAP1-221ENST00000549047 PZPP20742 1482 aa23.59■■□□□ 1.37
ARFGAP1-221ENST00000549047 DUOX2Q9NRD8 1548 aa23.59■■□□□ 1.37
ARFGAP1-221ENST00000549047 RNF17Q9BXT8 1623 aaKnown RBP23.58■■□□□ 1.36
ARFGAP1-221ENST00000549047 RRP7BPQ9NSQ0 103 aa23.57■■□□□ 1.36
ARFGAP1-221ENST00000549047 EIF2AK4Q9P2K8 1649 aaKnown RBP23.57■■□□□ 1.36
ARFGAP1-221ENST00000549047 PTPRTO14522 1441 aa23.57■■□□□ 1.36
ARFGAP1-221ENST00000549047 CEP170BQ9Y4F5 1589 aaPredicted RBP23.57■■□□□ 1.36
ARFGAP1-221ENST00000549047 DNMT1P26358 1616 aaKnown RBP23.56■■□□□ 1.36
ARFGAP1-221ENST00000549047 CAMSAP1Q5T5Y3 1602 aa23.56■■□□□ 1.36
ARFGAP1-221ENST00000549047 CROCC2H7BZ55 1655 aa23.56■■□□□ 1.36
ARFGAP1-221ENST00000549047 TNRQ92752 1358 aa23.55■■□□□ 1.36
ARFGAP1-221ENST00000549047 ZNF142P52746 1687 aaPredicted RBP23.54■■□□□ 1.36
ARFGAP1-221ENST00000549047 ABCC3O15438 1527 aa23.54■■□□□ 1.36
ARFGAP1-221ENST00000549047 CERKQ8TCT0 537 aa23.53■■□□□ 1.36
ARFGAP1-221ENST00000549047 CHIC2Q9UKJ5 165 aa23.53■■□□□ 1.36
ARFGAP1-221ENST00000549047 ERBINQ96RT1 1412 aa23.52■■□□□ 1.36
ARFGAP1-221ENST00000549047 A2ML1A8K2U0 1454 aa23.52■■□□□ 1.36
ARFGAP1-221ENST00000549047 FAM50AQ14320 339 aaKnown RBP23.52■■□□□ 1.36
ARFGAP1-221ENST00000549047 MROH1Q8NDA8 1641 aa23.51■■□□□ 1.35
ARFGAP1-221ENST00000549047 NCKAP5LQ9HCH0 1330 aa23.51■■□□□ 1.35
ARFGAP1-221ENST00000549047 ANKRD30AQ9BXX3 1397 aa23.51■■□□□ 1.35
ARFGAP1-221ENST00000549047 PLA2R1Q13018 1463 aa23.5■■□□□ 1.35
ARFGAP1-221ENST00000549047 ZC3H13Q5T200 1668 aaKnown RBP23.48■■□□□ 1.35
ARFGAP1-221ENST00000549047 PKD2Q13563 968 aa23.47■■□□□ 1.35
ARFGAP1-221ENST00000549047 PRDM15P57071 1507 aaPredicted RBP23.45■■□□□ 1.34
ARFGAP1-221ENST00000549047 NLRP1Q9C000 1473 aa23.44■■□□□ 1.34
ARFGAP1-221ENST00000549047 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.44■■□□□ 1.345e-11■□□□□ 11.1
ARFGAP1-221ENST00000549047 ADGRL2O95490 1459 aa23.43■■□□□ 1.34
ARFGAP1-221ENST00000549047 ERVK-7P63135 1459 aa23.42■■□□□ 1.34
ARFGAP1-221ENST00000549047 SPATA31D1Q6ZQQ2 1576 aa23.41■■□□□ 1.34
ARFGAP1-221ENST00000549047 PPARGC1BQ86YN6 1023 aaKnown RBP23.4■■□□□ 1.34
ARFGAP1-221ENST00000549047 KANK1Q14678 1352 aa23.4■■□□□ 1.34
ARFGAP1-221ENST00000549047 CEP152O94986 1710 aa23.39■■□□□ 1.34
ARFGAP1-221ENST00000549047 THEMISQ8N1K5 641 aaPredicted RBP23.39■■□□□ 1.33
ARFGAP1-221ENST00000549047 DEPDC5O75140 1603 aa23.38■■□□□ 1.33
ARFGAP1-221ENST00000549047 ARHGAP31Q2M1Z3 1444 aa23.38■■□□□ 1.33
ARFGAP1-221ENST00000549047 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.38■■□□□ 1.331e-7■■□□□ 12
ARFGAP1-221ENST00000549047 UGGT1Q9NYU2 1555 aa23.37■■□□□ 1.33
ARFGAP1-221ENST00000549047 LTBP4Q8N2S1 1624 aa23.37■■□□□ 1.33
ARFGAP1-221ENST00000549047 ZNF335Q9H4Z2 1342 aaPredicted RBP23.34■■□□□ 1.33
ARFGAP1-221ENST00000549047 ANKRD50Q9ULJ7 1429 aa23.34■■□□□ 1.33
ARFGAP1-221ENST00000549047 ANKLE2Q86XL3 938 aa23.33■■□□□ 1.33
ARFGAP1-221ENST00000549047 LMTK2Q8IWU2 1503 aa23.32■■□□□ 1.32
ARFGAP1-221ENST00000549047 VWDEQ8N2E2 1590 aa23.31■■□□□ 1.32
ARFGAP1-221ENST00000549047 NEURL4Q96JN8 1562 aa23.31■■□□□ 1.32
ARFGAP1-221ENST00000549047 ROCK1Q13464 1354 aa23.28■■□□□ 1.32
ARFGAP1-221ENST00000549047 POLR1AO95602 1720 aaPredicted RBP23.26■■□□□ 1.31
ARFGAP1-221ENST00000549047 ITGAEP38570 1179 aa23.26■■□□□ 1.31
ARFGAP1-221ENST00000549047 IQSEC2Q5JU85 1478 aa23.25■■□□□ 1.31
ARFGAP1-221ENST00000549047 NPHP4O75161 1426 aaPredicted RBP23.25■■□□□ 1.31
ARFGAP1-221ENST00000549047 MED14O60244 1454 aa23.24■■□□□ 1.31
ARFGAP1-221ENST00000549047 EFCAB6Q5THR3 1501 aa23.24■■□□□ 1.31
ARFGAP1-221ENST00000549047 CFAP65Q6ZU64 1925 aaKnown RBP23.23■■□□□ 1.31
ARFGAP1-221ENST00000549047 UBR1Q8IWV7 1749 aa23.21■■□□□ 1.31
ARFGAP1-221ENST00000549047 NOS1P29475 1434 aa23.2■■□□□ 1.3
ARFGAP1-221ENST00000549047 IDI1Q13907 227 aa23.18■■□□□ 1.3
ARFGAP1-221ENST00000549047 STAG3Q9UJ98 1225 aa23.18■■□□□ 1.3
ARFGAP1-221ENST00000549047 SCAF11Q99590 1463 aaKnown RBP23.17■■□□□ 1.3
ARFGAP1-221ENST00000549047 ARHGAP23Q9P227 1491 aa23.17■■□□□ 1.3
ARFGAP1-221ENST00000549047 SYNMO15061 1565 aa23.17■■□□□ 1.3
ARFGAP1-221ENST00000549047 SLIT1O75093 1534 aa23.17■■□□□ 1.3
ARFGAP1-221ENST00000549047 RPRD2Q5VT52 1461 aaKnown RBP23.17■■□□□ 1.3
ARFGAP1-221ENST00000549047 RRBP1Q9P2E9 1410 aaKnown RBP23.16■■□□□ 1.3
ARFGAP1-221ENST00000549047 PIK3C2BO00750 1634 aa23.16■■□□□ 1.3
ARFGAP1-221ENST00000549047 UNC13BO14795 1591 aa23.16■■□□□ 1.3
ARFGAP1-221ENST00000549047 LTKP29376 864 aa23.16■■□□□ 1.3
ARFGAP1-221ENST00000549047 TXNDC2Q86VQ3 553 aa23.15■■□□□ 1.3
ARFGAP1-221ENST00000549047 IQGAP1P46940 1657 aa23.15■■□□□ 1.3
ARFGAP1-221ENST00000549047 TMEM2Q9UHN6 1383 aa23.14■■□□□ 1.3
ARFGAP1-221ENST00000549047 EID1Q9Y6B2 187 aa23.14■■□□□ 1.29
ARFGAP1-221ENST00000549047 CPS1P31327 1500 aa23.13■■□□□ 1.29
ARFGAP1-221ENST00000549047 SLC52A1Q9NWF4 448 aa23.13■■□□□ 1.29
ARFGAP1-221ENST00000549047 TET3O43151 1660 aa23.13■■□□□ 1.29
ARFGAP1-221ENST00000549047 UBAP1LF5GYI3 381 aa23.11■■□□□ 1.29
ARFGAP1-221ENST00000549047 NUP155O75694 1391 aa23.1■■□□□ 1.29
ARFGAP1-221ENST00000549047 ADGRB3O60242 1522 aa23.08■■□□□ 1.29
ARFGAP1-221ENST00000549047 KDM5AP29375 1690 aaKnown RBP23.08■■□□□ 1.29
ARFGAP1-221ENST00000549047 IQGAP3Q86VI3 1631 aa23.07■■□□□ 1.28
ARFGAP1-221ENST00000549047 GCC2Q8IWJ2 1684 aa23.06■■□□□ 1.28
ARFGAP1-221ENST00000549047 E9PCH4 1651 aa23.02■■□□□ 1.28
ARFGAP1-221ENST00000549047 NAIPQ13075 1403 aa23■■□□□ 1.27
ARFGAP1-221ENST00000549047 LRRC7Q96NW7 1537 aa22.99■■□□□ 1.27
ARFGAP1-221ENST00000549047 TOM1O60784 492 aa22.98■■□□□ 1.27
ARFGAP1-221ENST00000549047 STRCP1A6NGW2 1772 aa22.97■■□□□ 1.27
ARFGAP1-221ENST00000549047 CHGAP10645 457 aaKnown RBP22.97■■□□□ 1.27
ARFGAP1-221ENST00000549047 ZFYVE9O95405 1425 aa22.97■■□□□ 1.27
ARFGAP1-221ENST00000549047 SLC26A8Q96RN1 970 aa22.96■■□□□ 1.27
ARFGAP1-221ENST00000549047 RIMS2Q9UQ26 1411 aa22.96■■□□□ 1.27
ARFGAP1-221ENST00000549047 TMEM131LA2VDJ0 1609 aa22.95■■□□□ 1.26
ARFGAP1-221ENST00000549047 PIP4K2BP78356 416 aa22.95■■□□□ 1.26
ARFGAP1-221ENST00000549047 SCAF1Q9H7N4 1312 aaKnown RBP22.95■■□□□ 1.26
ARFGAP1-221ENST00000549047 HFM1A2PYH4 1435 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 316.8 ms