RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 RBM19Q9Y4C8 960 aaKnown RBP19.9■□□□□ 0.78
LETMD1-209ENST00000547318 ANP32EQ9BTT0 268 aa19.89■□□□□ 0.77
LETMD1-209ENST00000547318 CARD11Q9BXL7 1154 aa19.89■□□□□ 0.77
LETMD1-209ENST00000547318 ARHGAP5Q13017 1502 aa19.89■□□□□ 0.77
LETMD1-209ENST00000547318 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.89■□□□□ 0.77
LETMD1-209ENST00000547318 ATP10AO60312 1499 aa19.89■□□□□ 0.77
LETMD1-209ENST00000547318 SYCP2Q9BX26 1530 aa19.88■□□□□ 0.77
LETMD1-209ENST00000547318 DUOX2Q9NRD8 1548 aa19.88■□□□□ 0.77
LETMD1-209ENST00000547318 MAGI2Q86UL8 1455 aa19.88■□□□□ 0.77
LETMD1-209ENST00000547318 CCDC144AA2RUR9 1427 aa19.88■□□□□ 0.77
LETMD1-209ENST00000547318 TTC37Q6PGP7 1564 aa19.87■□□□□ 0.77
LETMD1-209ENST00000547318 HNRNPMP52272 730 aaKnown RBP eCLIP19.86■□□□□ 0.77
LETMD1-209ENST00000547318 GPRASP1Q5JY77 1395 aa19.86■□□□□ 0.77
LETMD1-209ENST00000547318 ERBINQ96RT1 1412 aa19.86■□□□□ 0.77
LETMD1-209ENST00000547318 PRAG1Q86YV5 1406 aa19.85■□□□□ 0.77
LETMD1-209ENST00000547318 BRD4O60885 1362 aaPredicted RBP19.85■□□□□ 0.77
LETMD1-209ENST00000547318 RALBP1Q15311 655 aa19.85■□□□□ 0.77
LETMD1-209ENST00000547318 ZNF326Q5BKZ1 582 aaKnown RBP19.84■□□□□ 0.77
LETMD1-209ENST00000547318 UHRF1BP1LA0JNW5 1464 aa19.83■□□□□ 0.76
LETMD1-209ENST00000547318 FANCIQ9NVI1 1328 aa19.82■□□□□ 0.76
LETMD1-209ENST00000547318 ARAP3Q8WWN8 1544 aa19.81■□□□□ 0.76
LETMD1-209ENST00000547318 PRDM15P57071 1507 aaPredicted RBP19.8■□□□□ 0.76
LETMD1-209ENST00000547318 ZMYM4Q5VZL5 1548 aa19.8■□□□□ 0.76
LETMD1-209ENST00000547318 NUDCQ9Y266 331 aa19.8■□□□□ 0.76
LETMD1-209ENST00000547318 MYBBP1AQ9BQG0 1328 aaKnown RBP19.8■□□□□ 0.76
LETMD1-209ENST00000547318 INSRP06213 1382 aa19.8■□□□□ 0.76
LETMD1-209ENST00000547318 LRPPRCP42704 1394 aaKnown RBP19.8■□□□□ 0.76
LETMD1-209ENST00000547318 RNF123Q5XPI4 1314 aa19.79■□□□□ 0.76
LETMD1-209ENST00000547318 WASHC2CQ9Y4E1 1318 aa19.79■□□□□ 0.76
LETMD1-209ENST00000547318 DCAF11Q8TEB1 546 aa19.79■□□□□ 0.76
LETMD1-209ENST00000547318 PNISRQ8TF01 805 aaKnown RBP19.77■□□□□ 0.76
LETMD1-209ENST00000547318 PLCH2O75038 1416 aa19.77■□□□□ 0.76
LETMD1-209ENST00000547318 ST20-MTHFSA0A0A6YYL1 179 aa19.76■□□□□ 0.75
LETMD1-209ENST00000547318 TMC1Q8TDI8 760 aa19.76■□□□□ 0.75
LETMD1-209ENST00000547318 A2MP01023 1474 aa19.75■□□□□ 0.75
LETMD1-209ENST00000547318 PLA2R1Q13018 1463 aa19.75■□□□□ 0.75
LETMD1-209ENST00000547318 ABCC1P33527 1531 aa19.75■□□□□ 0.75
LETMD1-209ENST00000547318 COL17A1Q9UMD9 1497 aaPredicted RBP19.75■□□□□ 0.75
LETMD1-209ENST00000547318 RNF17Q9BXT8 1623 aaKnown RBP19.74■□□□□ 0.75
LETMD1-209ENST00000547318 ZCCHC11Q5TAX3 1644 aaKnown RBP19.74■□□□□ 0.75
LETMD1-209ENST00000547318 STAC3Q96MF2 364 aa19.73■□□□□ 0.75
LETMD1-209ENST00000547318 CLASP1Q7Z460 1538 aa19.72■□□□□ 0.75
LETMD1-209ENST00000547318 RTEL1-TNFRSF6BF6WH68 1400 aa19.72■□□□□ 0.75
LETMD1-209ENST00000547318 PARD3Q8TEW0 1356 aa19.72■□□□□ 0.75
LETMD1-209ENST00000547318 POLR3GLQ9BT43 218 aa19.71■□□□□ 0.75
LETMD1-209ENST00000547318 IRX6P78412 446 aaPredicted RBP19.71■□□□□ 0.75
LETMD1-209ENST00000547318 KDM2AQ9Y2K7 1162 aa19.71■□□□□ 0.75
LETMD1-209ENST00000547318 EFCAB2Q5VUJ9 269 aa19.69■□□□□ 0.74
LETMD1-209ENST00000547318 NLRP13Q86W25 1043 aa19.69■□□□□ 0.74
LETMD1-209ENST00000547318 NEURL4Q96JN8 1562 aa19.68■□□□□ 0.74
LETMD1-209ENST00000547318 PDE3BQ13370 1112 aa19.68■□□□□ 0.74
LETMD1-209ENST00000547318 DEPDC5O75140 1603 aa19.66■□□□□ 0.74
LETMD1-209ENST00000547318 TRPM2O94759 1503 aa19.65■□□□□ 0.74
LETMD1-209ENST00000547318 ERCC6L2Q5T890 1561 aa19.64■□□□□ 0.74
LETMD1-209ENST00000547318 CEP152O94986 1710 aa19.63■□□□□ 0.73
LETMD1-209ENST00000547318 WDR7Q9Y4E6 1490 aa19.62■□□□□ 0.73
LETMD1-209ENST00000547318 SPHKAPQ2M3C7 1700 aa19.62■□□□□ 0.73
LETMD1-209ENST00000547318 IQGAP1P46940 1657 aa19.61■□□□□ 0.73
LETMD1-209ENST00000547318 ZFYVE16Q7Z3T8 1539 aa19.61■□□□□ 0.73
LETMD1-209ENST00000547318 MADDQ8WXG6 1647 aa19.61■□□□□ 0.73
LETMD1-209ENST00000547318 TMF1P82094 1093 aa19.61■□□□□ 0.73
LETMD1-209ENST00000547318 TET3O43151 1660 aa19.6■□□□□ 0.73
LETMD1-209ENST00000547318 KIAA1210Q9ULL0 1709 aa19.6■□□□□ 0.73
LETMD1-209ENST00000547318 PER1O15534 1290 aaPredicted RBP19.59■□□□□ 0.73
LETMD1-209ENST00000547318 SCAPERQ9BY12 1400 aa19.59■□□□□ 0.73
LETMD1-209ENST00000547318 PTPRTO14522 1441 aa19.59■□□□□ 0.73
LETMD1-209ENST00000547318 TESK2Q96S53 571 aa19.59■□□□□ 0.73
LETMD1-209ENST00000547318 B4GALNT3Q6L9W6 998 aa19.58■□□□□ 0.73
LETMD1-209ENST00000547318 BLMP54132 1417 aaPredicted RBP19.57■□□□□ 0.72
LETMD1-209ENST00000547318 ABCA9Q8IUA7 1624 aa19.56■□□□□ 0.72
LETMD1-209ENST00000547318 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.56■□□□□ 0.723e-14■□□□□ 10.9
LETMD1-209ENST00000547318 VWDEQ8N2E2 1590 aa19.56■□□□□ 0.72
LETMD1-209ENST00000547318 INO80Q9ULG1 1556 aaPredicted RBP19.56■□□□□ 0.72
LETMD1-209ENST00000547318 SLC24A1O60721 1099 aa19.56■□□□□ 0.72
LETMD1-209ENST00000547318 CDCA8Q53HL2 280 aa19.56■□□□□ 0.72
LETMD1-209ENST00000547318 RGL3Q3MIN7 710 aa19.55■□□□□ 0.72
LETMD1-209ENST00000547318 TRAPPC8Q9Y2L5 1435 aa19.55■□□□□ 0.72
LETMD1-209ENST00000547318 SYNMO15061 1565 aa19.55■□□□□ 0.72
LETMD1-209ENST00000547318 NBPF1Q3BBV0 1214 aa19.54■□□□□ 0.72
LETMD1-209ENST00000547318 SPAG9O60271 1321 aaKnown RBP19.54■□□□□ 0.72
LETMD1-209ENST00000547318 CCDC136Q96JN2 1154 aa19.54■□□□□ 0.72
LETMD1-209ENST00000547318 DISP3Q9P2K9 1392 aa19.54■□□□□ 0.72
LETMD1-209ENST00000547318 KANK1Q14678 1352 aa19.52■□□□□ 0.72
LETMD1-209ENST00000547318 ATP7AQ04656 1500 aa19.51■□□□□ 0.71
LETMD1-209ENST00000547318 MYT1LQ9UL68 1186 aa19.51■□□□□ 0.71
LETMD1-209ENST00000547318 SCAF11Q99590 1463 aaKnown RBP19.51■□□□□ 0.71
LETMD1-209ENST00000547318 ERICH6Q7L0X2 663 aa19.51■□□□□ 0.71
LETMD1-209ENST00000547318 EIF3AQ14152 1382 aaKnown RBP19.5■□□□□ 0.71
LETMD1-209ENST00000547318 CLTCL1P53675 1640 aa19.49■□□□□ 0.71
LETMD1-209ENST00000547318 NPC1L1Q9UHC9 1359 aa19.49■□□□□ 0.71
LETMD1-209ENST00000547318 RRP1P56182 461 aaKnown RBP19.49■□□□□ 0.71
LETMD1-209ENST00000547318 MSH5O43196 834 aa19.48■□□□□ 0.71
LETMD1-209ENST00000547318 MYOM2P54296 1465 aa19.47■□□□□ 0.71
LETMD1-209ENST00000547318 RCAN3Q9UKA8 241 aa19.47■□□□□ 0.71
LETMD1-209ENST00000547318 CNGB1Q14028 1251 aaPredicted RBP19.46■□□□□ 0.71
LETMD1-209ENST00000547318 PANK3Q9H999 370 aa19.46■□□□□ 0.71
LETMD1-209ENST00000547318 FANCAO15360 1455 aa19.45■□□□□ 0.7
LETMD1-209ENST00000547318 PIK3C2GO75747 1445 aa19.42■□□□□ 0.7
LETMD1-209ENST00000547318 KDM5AP29375 1690 aaKnown RBP19.42■□□□□ 0.7
LETMD1-209ENST00000547318 LMTK2Q8IWU2 1503 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms