RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 LMTK3Q96Q04 1460 aa16.93■□□□□ 0.3
GCN1-202ENST00000547263 KIF15Q9NS87 1388 aa16.91■□□□□ 0.3
GCN1-202ENST00000547263 ZC3H13Q5T200 1668 aaKnown RBP16.91■□□□□ 0.3
GCN1-202ENST00000547263 PREX1Q8TCU6 1659 aa16.91■□□□□ 0.3
GCN1-202ENST00000547263 PRDM15P57071 1507 aaPredicted RBP16.91■□□□□ 0.3
GCN1-202ENST00000547263 ZMYM3Q14202 1370 aa16.89■□□□□ 0.3
GCN1-202ENST00000547263 NPATQ14207 1427 aa16.89■□□□□ 0.29
GCN1-202ENST00000547263 ANKRD30AQ9BXX3 1397 aa16.89■□□□□ 0.29
GCN1-202ENST00000547263 KIF3BO15066 747 aa16.88■□□□□ 0.29
GCN1-202ENST00000547263 VWDEQ8N2E2 1590 aa16.88■□□□□ 0.29
GCN1-202ENST00000547263 ROCK1Q13464 1354 aa16.88■□□□□ 0.29
GCN1-202ENST00000547263 ABCC3O15438 1527 aa16.86■□□□□ 0.29
GCN1-202ENST00000547263 CEBPAP49715 358 aaPredicted RBP16.85■□□□□ 0.29
GCN1-202ENST00000547263 GGT6Q6P531 493 aa16.85■□□□□ 0.29
GCN1-202ENST00000547263 FAM50AQ14320 339 aaKnown RBP16.84■□□□□ 0.29
GCN1-202ENST00000547263 PZPP20742 1482 aa16.84■□□□□ 0.29
GCN1-202ENST00000547263 PPARGC1BQ86YN6 1023 aaKnown RBP16.83■□□□□ 0.28
GCN1-202ENST00000547263 ZNF142P52746 1687 aaPredicted RBP16.82■□□□□ 0.28
GCN1-202ENST00000547263 LMTK2Q8IWU2 1503 aa16.82■□□□□ 0.28
GCN1-202ENST00000547263 RRP7BPQ9NSQ0 103 aa16.82■□□□□ 0.28
GCN1-202ENST00000547263 CEP152O94986 1710 aa16.82■□□□□ 0.28
GCN1-202ENST00000547263 ESF1Q9H501 851 aaKnown RBP16.81■□□□□ 0.28
GCN1-202ENST00000547263 CAMSAP1Q5T5Y3 1602 aa16.81■□□□□ 0.28
GCN1-202ENST00000547263 ANKRD50Q9ULJ7 1429 aa16.8■□□□□ 0.28
GCN1-202ENST00000547263 CHIC2Q9UKJ5 165 aa16.8■□□□□ 0.28
GCN1-202ENST00000547263 MYO3AQ8NEV4 1616 aa16.8■□□□□ 0.28
GCN1-202ENST00000547263 UNC13BO14795 1591 aa16.8■□□□□ 0.28
GCN1-202ENST00000547263 ARHGAP31Q2M1Z3 1444 aa16.79■□□□□ 0.28
GCN1-202ENST00000547263 SPATA31D1Q6ZQQ2 1576 aa16.79■□□□□ 0.28
GCN1-202ENST00000547263 UHRF1BP1Q6BDS2 1440 aa16.79■□□□□ 0.28
GCN1-202ENST00000547263 WASHC2CQ9Y4E1 1318 aa16.76■□□□□ 0.27
GCN1-202ENST00000547263 GCC2Q8IWJ2 1684 aa16.75■□□□□ 0.27
GCN1-202ENST00000547263 STRCQ7RTU9 1775 aa16.74■□□□□ 0.27
GCN1-202ENST00000547263 CEP170BQ9Y4F5 1589 aaPredicted RBP16.74■□□□□ 0.27
GCN1-202ENST00000547263 ERVK-7P63135 1459 aa16.73■□□□□ 0.27
GCN1-202ENST00000547263 EFCAB6Q5THR3 1501 aa16.73■□□□□ 0.27
GCN1-202ENST00000547263 IQGAP3Q86VI3 1631 aa16.72■□□□□ 0.27
GCN1-202ENST00000547263 PLPPR3Q6T4P5 718 aa16.71■□□□□ 0.27
GCN1-202ENST00000547263 A2ML1A8K2U0 1454 aa16.71■□□□□ 0.27
GCN1-202ENST00000547263 TET3O43151 1660 aa16.71■□□□□ 0.27
GCN1-202ENST00000547263 NAIPQ13075 1403 aa16.7■□□□□ 0.26
GCN1-202ENST00000547263 PLA2R1Q13018 1463 aa16.7■□□□□ 0.26
GCN1-202ENST00000547263 NLRP1Q9C000 1473 aa16.7■□□□□ 0.26
GCN1-202ENST00000547263 TNRQ92752 1358 aa16.7■□□□□ 0.26
GCN1-202ENST00000547263 FBXO31Q5XUX0 539 aaPredicted RBP16.7■□□□□ 0.26
GCN1-202ENST00000547263 HFM1A2PYH4 1435 aa16.7■□□□□ 0.26
GCN1-202ENST00000547263 RPRD2Q5VT52 1461 aaKnown RBP16.69■□□□□ 0.26
GCN1-202ENST00000547263 KANK1Q14678 1352 aa16.69■□□□□ 0.26
GCN1-202ENST00000547263 HSPA2P54652 639 aa16.69■□□□□ 0.26
GCN1-202ENST00000547263 NOS1P29475 1434 aa16.67■□□□□ 0.26
GCN1-202ENST00000547263 KDM5AP29375 1690 aaKnown RBP16.66■□□□□ 0.26
GCN1-202ENST00000547263 SYNMO15061 1565 aa16.64■□□□□ 0.25
GCN1-202ENST00000547263 E9PCH4 1651 aa16.64■□□□□ 0.25
GCN1-202ENST00000547263 CFAP65Q6ZU64 1925 aaKnown RBP16.64■□□□□ 0.25
GCN1-202ENST00000547263 UBR1Q8IWV7 1749 aa16.63■□□□□ 0.25
GCN1-202ENST00000547263 ITGAEP38570 1179 aa16.63■□□□□ 0.25
GCN1-202ENST00000547263 PTPRTO14522 1441 aa16.62■□□□□ 0.25
GCN1-202ENST00000547263 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.62■□□□□ 0.25
GCN1-202ENST00000547263 UGGT1Q9NYU2 1555 aa16.61■□□□□ 0.25
GCN1-202ENST00000547263 PIK3C2BO00750 1634 aa16.61■□□□□ 0.25
GCN1-202ENST00000547263 POLR1AO95602 1720 aaPredicted RBP16.59■□□□□ 0.25
GCN1-202ENST00000547263 NEURL4Q96JN8 1562 aa16.59■□□□□ 0.25
GCN1-202ENST00000547263 ARHGAP23Q9P227 1491 aa16.58■□□□□ 0.24
GCN1-202ENST00000547263 SLIT1O75093 1534 aa16.57■□□□□ 0.24
GCN1-202ENST00000547263 NUP155O75694 1391 aa16.57■□□□□ 0.24
GCN1-202ENST00000547263 MED14O60244 1454 aa16.56■□□□□ 0.24
GCN1-202ENST00000547263 PKD2Q13563 968 aa16.56■□□□□ 0.24
GCN1-202ENST00000547263 DMRT2Q9Y5R5 561 aa16.55■□□□□ 0.24
GCN1-202ENST00000547263 ADGRB3O60242 1522 aa16.54■□□□□ 0.24
GCN1-202ENST00000547263 THEMISQ8N1K5 641 aaPredicted RBP16.53■□□□□ 0.24
GCN1-202ENST00000547263 SPHKAPQ2M3C7 1700 aa16.53■□□□□ 0.24
GCN1-202ENST00000547263 SLC52A1Q9NWF4 448 aa16.52■□□□□ 0.24
GCN1-202ENST00000547263 TMEM131LA2VDJ0 1609 aa16.52■□□□□ 0.23
GCN1-202ENST00000547263 IDI1Q13907 227 aa16.51■□□□□ 0.23
GCN1-202ENST00000547263 LTBP4Q8N2S1 1624 aa16.5■□□□□ 0.23
GCN1-202ENST00000547263 MYO5BQ9ULV0 1848 aa16.49■□□□□ 0.23
GCN1-202ENST00000547263 NCKAP5LQ9HCH0 1330 aa16.48■□□□□ 0.23
GCN1-202ENST00000547263 SETD5Q9C0A6 1442 aa16.48■□□□□ 0.23
GCN1-202ENST00000547263 TRPM2O94759 1503 aa16.48■□□□□ 0.23
GCN1-202ENST00000547263 TMEM2Q9UHN6 1383 aa16.48■□□□□ 0.23
GCN1-202ENST00000547263 ACIN1Q9UKV3 1341 aaKnown RBP16.47■□□□□ 0.23
GCN1-202ENST00000547263 IQGAP1P46940 1657 aa16.47■□□□□ 0.23
GCN1-202ENST00000547263 SCAF11Q99590 1463 aaKnown RBP16.47■□□□□ 0.23
GCN1-202ENST00000547263 ZFYVE9O95405 1425 aa16.45■□□□□ 0.22
GCN1-202ENST00000547263 ANKLE2Q86XL3 938 aa16.45■□□□□ 0.22
GCN1-202ENST00000547263 NPHP4O75161 1426 aaPredicted RBP16.45■□□□□ 0.22
GCN1-202ENST00000547263 CLTCL1P53675 1640 aa16.44■□□□□ 0.22
GCN1-202ENST00000547263 HRCP23327 699 aa16.42■□□□□ 0.22
GCN1-202ENST00000547263 LTKP29376 864 aa16.42■□□□□ 0.22
GCN1-202ENST00000547263 RAB3GAP2Q9H2M9 1393 aa16.41■□□□□ 0.22
GCN1-202ENST00000547263 IQSEC2Q5JU85 1478 aa16.41■□□□□ 0.22
GCN1-202ENST00000547263 STRCP1A6NGW2 1772 aa16.38■□□□□ 0.21
GCN1-202ENST00000547263 TXNDC2Q86VQ3 553 aa16.37■□□□□ 0.21
GCN1-202ENST00000547263 SLC4A1APQ9BWU0 796 aaKnown RBP16.37■□□□□ 0.21
GCN1-202ENST00000547263 KIF1BO60333 1816 aa16.37■□□□□ 0.21
GCN1-202ENST00000547263 RIMS2Q9UQ26 1411 aa16.36■□□□□ 0.21
GCN1-202ENST00000547263 TRIM52Q96A61 297 aa16.36■□□□□ 0.21
GCN1-202ENST00000547263 ZNF335Q9H4Z2 1342 aaPredicted RBP16.36■□□□□ 0.21
GCN1-202ENST00000547263 CPS1P31327 1500 aa16.35■□□□□ 0.21
GCN1-202ENST00000547263 CERKQ8TCT0 537 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms