RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 TSPY4P0CV99 314 aa18.21■□□□□ 0.51
RAB5C-203ENST00000546881 TSPY10P0CW01 314 aa18.21■□□□□ 0.51
RAB5C-203ENST00000546881 FBXO31Q5XUX0 539 aaPredicted RBP18.21■□□□□ 0.51
RAB5C-203ENST00000546881 KDM5DQ9BY66 1539 aa18.21■□□□□ 0.51
RAB5C-203ENST00000546881 TCOF1Q13428 1488 aaKnown RBP18.2■□□□□ 0.5
RAB5C-203ENST00000546881 TNRQ92752 1358 aa18.2■□□□□ 0.5
RAB5C-203ENST00000546881 VPS8Q8N3P4 1428 aa18.2■□□□□ 0.5
RAB5C-203ENST00000546881 DNMT1P26358 1616 aaKnown RBP18.19■□□□□ 0.5
RAB5C-203ENST00000546881 LRRC9Q6ZRR7 1453 aa18.19■□□□□ 0.5
RAB5C-203ENST00000546881 ARHGEF5Q12774 1597 aa18.18■□□□□ 0.5
RAB5C-203ENST00000546881 UBAP1LF5GYI3 381 aa18.17■□□□□ 0.5
RAB5C-203ENST00000546881 PZPP20742 1482 aa18.17■□□□□ 0.5
RAB5C-203ENST00000546881 FAM135AQ9P2D6 1515 aa18.15■□□□□ 0.5
RAB5C-203ENST00000546881 KANK4Q5T7N3 995 aaPredicted RBP18.14■□□□□ 0.49
RAB5C-203ENST00000546881 SPATA31D1Q6ZQQ2 1576 aa18.13■□□□□ 0.49
RAB5C-203ENST00000546881 POLR1AO95602 1720 aaPredicted RBP18.12■□□□□ 0.49
RAB5C-203ENST00000546881 ILDR2Q71H61 639 aa18.12■□□□□ 0.49
RAB5C-203ENST00000546881 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.11■□□□□ 0.49
RAB5C-203ENST00000546881 MIA2Q96PC5 1412 aa18.1■□□□□ 0.49
RAB5C-203ENST00000546881 NEURL4Q96JN8 1562 aa18.09■□□□□ 0.49
RAB5C-203ENST00000546881 MAST1Q9Y2H9 1570 aa18.09■□□□□ 0.49
RAB5C-203ENST00000546881 ANKLE2Q86XL3 938 aa18.09■□□□□ 0.49
RAB5C-203ENST00000546881 THEMISQ8N1K5 641 aaPredicted RBP18.09■□□□□ 0.49
RAB5C-203ENST00000546881 UGGT1Q9NYU2 1555 aa18.08■□□□□ 0.49
RAB5C-203ENST00000546881 NLRP1Q9C000 1473 aa18.08■□□□□ 0.49
RAB5C-203ENST00000546881 MYOM3Q5VTT5 1437 aa18.08■□□□□ 0.49
RAB5C-203ENST00000546881 SCAF1Q9H7N4 1312 aaKnown RBP18.08■□□□□ 0.49
RAB5C-203ENST00000546881 RNF17Q9BXT8 1623 aaKnown RBP18.08■□□□□ 0.48
RAB5C-203ENST00000546881 ABCC3O15438 1527 aa18.07■□□□□ 0.48
RAB5C-203ENST00000546881 MAP3K1Q13233 1512 aa18.07■□□□□ 0.48
RAB5C-203ENST00000546881 ZC3H13Q5T200 1668 aaKnown RBP18.06■□□□□ 0.48
RAB5C-203ENST00000546881 EIF2AK4Q9P2K8 1649 aaKnown RBP18.05■□□□□ 0.48
RAB5C-203ENST00000546881 SHANK2Q9UPX8 1470 aa18.05■□□□□ 0.48
RAB5C-203ENST00000546881 PIP4K2BP78356 416 aa18.04■□□□□ 0.48
RAB5C-203ENST00000546881 APLP2Q06481 763 aa18.04■□□□□ 0.48
RAB5C-203ENST00000546881 NPHP4O75161 1426 aaPredicted RBP18.04■□□□□ 0.48
RAB5C-203ENST00000546881 CPS1P31327 1500 aa18.03■□□□□ 0.48
RAB5C-203ENST00000546881 CEP152O94986 1710 aa18.02■□□□□ 0.48
RAB5C-203ENST00000546881 DUOX2Q9NRD8 1548 aa18.02■□□□□ 0.47
RAB5C-203ENST00000546881 ERVK-7P63135 1459 aa18.01■□□□□ 0.47
RAB5C-203ENST00000546881 SOCS7O14512 581 aa18.01■□□□□ 0.47
RAB5C-203ENST00000546881 MROH1Q8NDA8 1641 aa18.01■□□□□ 0.47
RAB5C-203ENST00000546881 TOM1O60784 492 aa18■□□□□ 0.47
RAB5C-203ENST00000546881 VWDEQ8N2E2 1590 aa18■□□□□ 0.47
RAB5C-203ENST00000546881 DEPDC5O75140 1603 aa17.99■□□□□ 0.47
RAB5C-203ENST00000546881 RRP7BPQ9NSQ0 103 aa17.99■□□□□ 0.47
RAB5C-203ENST00000546881 KIF15Q9NS87 1388 aa17.99■□□□□ 0.47
RAB5C-203ENST00000546881 IQGAP1P46940 1657 aa17.99■□□□□ 0.47
RAB5C-203ENST00000546881 CFAP65Q6ZU64 1925 aaKnown RBP17.98■□□□□ 0.47
RAB5C-203ENST00000546881 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.98■□□□□ 0.471e-8■■■□□ 15.5
RAB5C-203ENST00000546881 MED14O60244 1454 aa17.98■□□□□ 0.47
RAB5C-203ENST00000546881 PTPN23Q9H3S7 1636 aa17.98■□□□□ 0.47
RAB5C-203ENST00000546881 HSPA1LP34931 641 aa17.97■□□□□ 0.47
RAB5C-203ENST00000546881 ABCC5O15440 1437 aa17.97■□□□□ 0.47
RAB5C-203ENST00000546881 CROCC2H7BZ55 1655 aa17.96■□□□□ 0.47
RAB5C-203ENST00000546881 DAPK1P53355 1430 aa17.94■□□□□ 0.46
RAB5C-203ENST00000546881 ERBINQ96RT1 1412 aa17.94■□□□□ 0.46
RAB5C-203ENST00000546881 UBR1Q8IWV7 1749 aa17.94■□□□□ 0.46
RAB5C-203ENST00000546881 CHIC2Q9UKJ5 165 aa17.93■□□□□ 0.46
RAB5C-203ENST00000546881 PRDM15P57071 1507 aaPredicted RBP17.93■□□□□ 0.46
RAB5C-203ENST00000546881 SENP3Q9H4L4 574 aaPredicted RBP17.92■□□□□ 0.46
RAB5C-203ENST00000546881 FGD6Q6ZV73 1430 aa17.91■□□□□ 0.46
RAB5C-203ENST00000546881 KANK1Q14678 1352 aa17.91■□□□□ 0.46
RAB5C-203ENST00000546881 SCAF11Q99590 1463 aaKnown RBP17.9■□□□□ 0.46
RAB5C-203ENST00000546881 TXNDC2Q86VQ3 553 aa17.9■□□□□ 0.46
RAB5C-203ENST00000546881 STRCP1A6NGW2 1772 aa17.89■□□□□ 0.45
RAB5C-203ENST00000546881 STAG3Q9UJ98 1225 aa17.89■□□□□ 0.45
RAB5C-203ENST00000546881 ARHGAP31Q2M1Z3 1444 aa17.89■□□□□ 0.45
RAB5C-203ENST00000546881 LRRC7Q96NW7 1537 aa17.88■□□□□ 0.45
RAB5C-203ENST00000546881 LTKP29376 864 aa17.88■□□□□ 0.45
RAB5C-203ENST00000546881 ANKRD30AQ9BXX3 1397 aa17.88■□□□□ 0.45
RAB5C-203ENST00000546881 EID1Q9Y6B2 187 aa17.87■□□□□ 0.45
RAB5C-203ENST00000546881 SYNMO15061 1565 aa17.87■□□□□ 0.45
RAB5C-203ENST00000546881 MED1Q15648 1581 aaPredicted RBP17.87■□□□□ 0.45
RAB5C-203ENST00000546881 PIK3C2BO00750 1634 aa17.87■□□□□ 0.45
RAB5C-203ENST00000546881 SLIT1O75093 1534 aa17.85■□□□□ 0.45
RAB5C-203ENST00000546881 ARHGAP23Q9P227 1491 aa17.85■□□□□ 0.45
RAB5C-203ENST00000546881 ALKQ9UM73 1620 aa17.85■□□□□ 0.45
RAB5C-203ENST00000546881 FAM50AQ14320 339 aaKnown RBP17.84■□□□□ 0.45
RAB5C-203ENST00000546881 TMEM2Q9UHN6 1383 aa17.81■□□□□ 0.44
RAB5C-203ENST00000546881 PHF23Q9BUL5 403 aaPredicted RBP17.81■□□□□ 0.44
RAB5C-203ENST00000546881 IDI1Q13907 227 aa17.8■□□□□ 0.44
RAB5C-203ENST00000546881 EFCAB6Q5THR3 1501 aa17.8■□□□□ 0.44
RAB5C-203ENST00000546881 LMTK2Q8IWU2 1503 aa17.8■□□□□ 0.44
RAB5C-203ENST00000546881 BCANQ96GW7 911 aa17.77■□□□□ 0.44
RAB5C-203ENST00000546881 ADGRL2O95490 1459 aa17.76■□□□□ 0.43
RAB5C-203ENST00000546881 SLC26A8Q96RN1 970 aa17.76■□□□□ 0.43
RAB5C-203ENST00000546881 KDM5AP29375 1690 aaKnown RBP17.75■□□□□ 0.43
RAB5C-203ENST00000546881 NOS1P29475 1434 aa17.74■□□□□ 0.43
RAB5C-203ENST00000546881 ANKRD50Q9ULJ7 1429 aa17.74■□□□□ 0.43
RAB5C-203ENST00000546881 ADGRB3O60242 1522 aa17.74■□□□□ 0.43
RAB5C-203ENST00000546881 XIRP1Q702N8 1843 aaKnown RBP17.74■□□□□ 0.43
RAB5C-203ENST00000546881 RBM33Q96EV2 1170 aaKnown RBP17.72■□□□□ 0.43
RAB5C-203ENST00000546881 SLC52A1Q9NWF4 448 aa17.72■□□□□ 0.43
RAB5C-203ENST00000546881 TMEM94Q12767 1356 aa17.71■□□□□ 0.43
RAB5C-203ENST00000546881 KCNA6P17658 529 aa17.71■□□□□ 0.43
RAB5C-203ENST00000546881 PROSER2Q86WR7 435 aaPredicted RBP17.71■□□□□ 0.43
RAB5C-203ENST00000546881 TET3O43151 1660 aa17.69■□□□□ 0.42
RAB5C-203ENST00000546881 PPP1R15AO75807 674 aaPredicted RBP17.69■□□□□ 0.42
RAB5C-203ENST00000546881 RPRD2Q5VT52 1461 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms