RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 CROCC2H7BZ55 1655 aa20.47■□□□□ 0.87
TNFRSF1A-215ENST00000543359 KDM5DQ9BY66 1539 aa20.47■□□□□ 0.87
TNFRSF1A-215ENST00000543359 WASHC2CQ9Y4E1 1318 aa20.46■□□□□ 0.87
TNFRSF1A-215ENST00000543359 DNMT1P26358 1616 aaKnown RBP20.45■□□□□ 0.87
TNFRSF1A-215ENST00000543359 DAPK1P53355 1430 aa20.45■□□□□ 0.86
TNFRSF1A-215ENST00000543359 NCOA1Q15788 1441 aa20.45■□□□□ 0.86
TNFRSF1A-215ENST00000543359 FBXO31Q5XUX0 539 aaPredicted RBP20.45■□□□□ 0.86
TNFRSF1A-215ENST00000543359 MYO3AQ8NEV4 1616 aa20.45■□□□□ 0.86
TNFRSF1A-215ENST00000543359 EIF2AK4Q9P2K8 1649 aaKnown RBP20.45■□□□□ 0.86
TNFRSF1A-215ENST00000543359 DUOX2Q9NRD8 1548 aa20.44■□□□□ 0.86
TNFRSF1A-215ENST00000543359 DMRT2Q9Y5R5 561 aa20.44■□□□□ 0.86
TNFRSF1A-215ENST00000543359 MROH1Q8NDA8 1641 aa20.44■□□□□ 0.86
TNFRSF1A-215ENST00000543359 ZNF142P52746 1687 aaPredicted RBP20.44■□□□□ 0.86
TNFRSF1A-215ENST00000543359 PZPP20742 1482 aa20.43■□□□□ 0.86
TNFRSF1A-215ENST00000543359 KIF15Q9NS87 1388 aa20.42■□□□□ 0.86
TNFRSF1A-215ENST00000543359 PTPRTO14522 1441 aa20.42■□□□□ 0.86
TNFRSF1A-215ENST00000543359 CEP170BQ9Y4F5 1589 aaPredicted RBP20.42■□□□□ 0.86
TNFRSF1A-215ENST00000543359 CAMSAP1Q5T5Y3 1602 aa20.42■□□□□ 0.86
TNFRSF1A-215ENST00000543359 ABCC3O15438 1527 aa20.41■□□□□ 0.86
TNFRSF1A-215ENST00000543359 FBXO41Q8TF61 875 aa20.4■□□□□ 0.86
TNFRSF1A-215ENST00000543359 RRP7BPQ9NSQ0 103 aa20.4■□□□□ 0.86
TNFRSF1A-215ENST00000543359 A2ML1A8K2U0 1454 aa20.38■□□□□ 0.85
TNFRSF1A-215ENST00000543359 TNRQ92752 1358 aa20.38■□□□□ 0.85
TNFRSF1A-215ENST00000543359 ERBINQ96RT1 1412 aa20.37■□□□□ 0.85
TNFRSF1A-215ENST00000543359 PLA2R1Q13018 1463 aa20.37■□□□□ 0.85
TNFRSF1A-215ENST00000543359 ZC3H13Q5T200 1668 aaKnown RBP20.36■□□□□ 0.85
TNFRSF1A-215ENST00000543359 CERKQ8TCT0 537 aa20.36■□□□□ 0.85
TNFRSF1A-215ENST00000543359 CHIC2Q9UKJ5 165 aa20.36■□□□□ 0.85
TNFRSF1A-215ENST00000543359 NCKAP5LQ9HCH0 1330 aa20.35■□□□□ 0.85
TNFRSF1A-215ENST00000543359 ADGRL2O95490 1459 aa20.34■□□□□ 0.85
TNFRSF1A-215ENST00000543359 ANKRD30AQ9BXX3 1397 aa20.34■□□□□ 0.85
TNFRSF1A-215ENST00000543359 DEPDC5O75140 1603 aa20.33■□□□□ 0.84
TNFRSF1A-215ENST00000543359 PRDM15P57071 1507 aaPredicted RBP20.32■□□□□ 0.84
TNFRSF1A-215ENST00000543359 FAM50AQ14320 339 aaKnown RBP20.32■□□□□ 0.84
TNFRSF1A-215ENST00000543359 CEP152O94986 1710 aa20.32■□□□□ 0.84
TNFRSF1A-215ENST00000543359 SPATA31D1Q6ZQQ2 1576 aa20.31■□□□□ 0.84
TNFRSF1A-215ENST00000543359 PKD2Q13563 968 aa20.31■□□□□ 0.84
TNFRSF1A-215ENST00000543359 LTBP4Q8N2S1 1624 aa20.3■□□□□ 0.84
TNFRSF1A-215ENST00000543359 NLRP1Q9C000 1473 aa20.3■□□□□ 0.84
TNFRSF1A-215ENST00000543359 ERVK-7P63135 1459 aa20.29■□□□□ 0.84
TNFRSF1A-215ENST00000543359 ARHGAP31Q2M1Z3 1444 aa20.28■□□□□ 0.84
TNFRSF1A-215ENST00000543359 VWDEQ8N2E2 1590 aa20.27■□□□□ 0.84
TNFRSF1A-215ENST00000543359 CFAP65Q6ZU64 1925 aaKnown RBP20.27■□□□□ 0.84
TNFRSF1A-215ENST00000543359 PPARGC1BQ86YN6 1023 aaKnown RBP20.26■□□□□ 0.83
TNFRSF1A-215ENST00000543359 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.25■□□□□ 0.83
TNFRSF1A-215ENST00000543359 LMTK2Q8IWU2 1503 aa20.24■□□□□ 0.83
TNFRSF1A-215ENST00000543359 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.23■□□□□ 0.83
TNFRSF1A-215ENST00000543359 THEMISQ8N1K5 641 aaPredicted RBP20.23■□□□□ 0.83
TNFRSF1A-215ENST00000543359 NEURL4Q96JN8 1562 aa20.23■□□□□ 0.83
TNFRSF1A-215ENST00000543359 UGGT1Q9NYU2 1555 aa20.23■□□□□ 0.83
TNFRSF1A-215ENST00000543359 ANKRD50Q9ULJ7 1429 aa20.21■□□□□ 0.83
TNFRSF1A-215ENST00000543359 POLR1AO95602 1720 aaPredicted RBP20.2■□□□□ 0.82
TNFRSF1A-215ENST00000543359 ZNF335Q9H4Z2 1342 aaPredicted RBP20.2■□□□□ 0.82
TNFRSF1A-215ENST00000543359 KANK1Q14678 1352 aa20.2■□□□□ 0.82
TNFRSF1A-215ENST00000543359 ROCK1Q13464 1354 aa20.19■□□□□ 0.82
TNFRSF1A-215ENST00000543359 ANKLE2Q86XL3 938 aa20.18■□□□□ 0.82
TNFRSF1A-215ENST00000543359 MED14O60244 1454 aa20.18■□□□□ 0.82
TNFRSF1A-215ENST00000543359 UBR1Q8IWV7 1749 aa20.17■□□□□ 0.82
TNFRSF1A-215ENST00000543359 IQSEC2Q5JU85 1478 aa20.15■□□□□ 0.82
TNFRSF1A-215ENST00000543359 EFCAB6Q5THR3 1501 aa20.15■□□□□ 0.82
TNFRSF1A-215ENST00000543359 NOS1P29475 1434 aa20.13■□□□□ 0.81
TNFRSF1A-215ENST00000543359 ARHGAP23Q9P227 1491 aa20.12■□□□□ 0.81
TNFRSF1A-215ENST00000543359 SYNMO15061 1565 aa20.12■□□□□ 0.81
TNFRSF1A-215ENST00000543359 NPHP4O75161 1426 aaPredicted RBP20.11■□□□□ 0.81
TNFRSF1A-215ENST00000543359 RRBP1Q9P2E9 1410 aaKnown RBP20.11■□□□□ 0.81
TNFRSF1A-215ENST00000543359 IDI1Q13907 227 aa20.11■□□□□ 0.81
TNFRSF1A-215ENST00000543359 UNC13BO14795 1591 aa20.11■□□□□ 0.81
TNFRSF1A-215ENST00000543359 PIK3C2BO00750 1634 aa20.1■□□□□ 0.81
TNFRSF1A-215ENST00000543359 LTKP29376 864 aa20.1■□□□□ 0.81
TNFRSF1A-215ENST00000543359 SLIT1O75093 1534 aa20.1■□□□□ 0.81
TNFRSF1A-215ENST00000543359 ITGAEP38570 1179 aa20.09■□□□□ 0.81
TNFRSF1A-215ENST00000543359 TET3O43151 1660 aa20.07■□□□□ 0.8
TNFRSF1A-215ENST00000543359 KDM5AP29375 1690 aaKnown RBP20.07■□□□□ 0.8
TNFRSF1A-215ENST00000543359 IQGAP1P46940 1657 aa20.07■□□□□ 0.8
TNFRSF1A-215ENST00000543359 RPRD2Q5VT52 1461 aaKnown RBP20.07■□□□□ 0.8
TNFRSF1A-215ENST00000543359 TMEM2Q9UHN6 1383 aa20.05■□□□□ 0.8
TNFRSF1A-215ENST00000543359 SCAF11Q99590 1463 aaKnown RBP20.05■□□□□ 0.8
TNFRSF1A-215ENST00000543359 TXNDC2Q86VQ3 553 aa20.04■□□□□ 0.8
TNFRSF1A-215ENST00000543359 SLC52A1Q9NWF4 448 aa20.04■□□□□ 0.8
TNFRSF1A-215ENST00000543359 GCC2Q8IWJ2 1684 aa20.03■□□□□ 0.8
TNFRSF1A-215ENST00000543359 IQGAP3Q86VI3 1631 aa20.03■□□□□ 0.8
TNFRSF1A-215ENST00000543359 CPS1P31327 1500 aa20.02■□□□□ 0.8
TNFRSF1A-215ENST00000543359 STRCP1A6NGW2 1772 aa20.01■□□□□ 0.79
TNFRSF1A-215ENST00000543359 E9PCH4 1651 aa20.01■□□□□ 0.79
TNFRSF1A-215ENST00000543359 NUP155O75694 1391 aa20■□□□□ 0.79
TNFRSF1A-215ENST00000543359 ADGRB3O60242 1522 aa19.99■□□□□ 0.79
TNFRSF1A-215ENST00000543359 STAG3Q9UJ98 1225 aa19.98■□□□□ 0.79
TNFRSF1A-215ENST00000543359 EID1Q9Y6B2 187 aa19.98■□□□□ 0.79
TNFRSF1A-215ENST00000543359 NAIPQ13075 1403 aa19.97■□□□□ 0.79
TNFRSF1A-215ENST00000543359 UBAP1LF5GYI3 381 aa19.97■□□□□ 0.79
TNFRSF1A-215ENST00000543359 TMEM131LA2VDJ0 1609 aa19.94■□□□□ 0.78
TNFRSF1A-215ENST00000543359 MYO5BQ9ULV0 1848 aa19.94■□□□□ 0.78
TNFRSF1A-215ENST00000543359 ZFYVE9O95405 1425 aa19.93■□□□□ 0.78
TNFRSF1A-215ENST00000543359 LRRC7Q96NW7 1537 aa19.93■□□□□ 0.78
TNFRSF1A-215ENST00000543359 ALKQ9UM73 1620 aa19.91■□□□□ 0.78
TNFRSF1A-215ENST00000543359 HFM1A2PYH4 1435 aa19.89■□□□□ 0.77
TNFRSF1A-215ENST00000543359 RIMS2Q9UQ26 1411 aa19.87■□□□□ 0.77
TNFRSF1A-215ENST00000543359 SLC26A8Q96RN1 970 aa19.87■□□□□ 0.77
TNFRSF1A-215ENST00000543359 TOM1O60784 492 aa19.85■□□□□ 0.77
TNFRSF1A-215ENST00000543359 XIRP1Q702N8 1843 aaKnown RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms