RNA–Protein interactions for RNA: ENST00000542896.5

PDCD2-209, Transcript of programmed cell death 2, human

TSL 2 BASIC

Gene PDCD2, Length 1,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD2-209	ENST00000542896	LRRC9	Q6ZRR7	1453 aa		41.19	■■■■■ 4.18
PDCD2-209	ENST00000542896	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	41.18	■■■■■ 4.18
PDCD2-209	ENST00000542896	A2ML1	A8K2U0	1454 aa		41.18	■■■■■ 4.18
PDCD2-209	ENST00000542896	WASHC2C	Q9Y4E1	1318 aa		41.17	■■■■■ 4.18
PDCD2-209	ENST00000542896	ARHGEF5	Q12774	1597 aa		41.16	■■■■■ 4.18
PDCD2-209	ENST00000542896	KDM5D	Q9BY66	1539 aa		41.15	■■■■■ 4.18
PDCD2-209	ENST00000542896	FBXO31	Q5XUX0	539 aa	Predicted RBP	41.15	■■■■■ 4.18
PDCD2-209	ENST00000542896	TNR	Q92752	1358 aa		41.14	■■■■■ 4.18
PDCD2-209	ENST00000542896	FAM135A	Q9P2D6	1515 aa		41.13	■■■■■ 4.17
PDCD2-209	ENST00000542896	PZP	P20742	1482 aa		41.1	■■■■■ 4.17
PDCD2-209	ENST00000542896	DNMT1	P26358	1616 aa	Known RBP	41.08	■■■■■ 4.17
PDCD2-209	ENST00000542896	KANK4	Q5T7N3	995 aa	Predicted RBP	41.06	■■■■■ 4.16
PDCD2-209	ENST00000542896	DISP3	Q9P2K9	1392 aa		41.05	■■■■■ 4.16
PDCD2-209	ENST00000542896	MAP3K1	Q13233	1512 aa		41.01	■■■■■ 4.16
PDCD2-209	ENST00000542896	UBAP1L	F5GYI3	381 aa		40.98	■■■■■ 4.15
PDCD2-209	ENST00000542896	MIA2	Q96PC5	1412 aa		40.97	■■■■■ 4.15
PDCD2-209	ENST00000542896	MAST1	Q9Y2H9	1570 aa		40.96	■■■■■ 4.15
PDCD2-209	ENST00000542896	MYOM3	Q5VTT5	1437 aa		40.96	■■■■■ 4.15
PDCD2-209	ENST00000542896	NLRP1	Q9C000	1473 aa		40.92	■■■■■ 4.14
PDCD2-209	ENST00000542896	THEMIS	Q8N1K5	641 aa	Predicted RBP	40.92	■■■■■ 4.14
PDCD2-209	ENST00000542896	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	40.91	■■■■■ 4.14
PDCD2-209	ENST00000542896	ANKLE2	Q86XL3	938 aa		40.91	■■■■■ 4.14
PDCD2-209	ENST00000542896	RNF17	Q9BXT8	1623 aa	Known RBP	40.88	■■■■■ 4.13
PDCD2-209	ENST00000542896	NEURL4	Q96JN8	1562 aa		40.86	■■■■■ 4.13
PDCD2-209	ENST00000542896	UGGT1	Q9NYU2	1555 aa		40.86	■■■■■ 4.13
PDCD2-209	ENST00000542896	ABCC3	O15438	1527 aa		40.85	■■■■■ 4.13
PDCD2-209	ENST00000542896	POLR1A	O95602	1720 aa	Predicted RBP	40.84	■■■■■ 4.13
PDCD2-209	ENST00000542896	APLP2	Q06481	763 aa		40.83	■■■■■ 4.13
PDCD2-209	ENST00000542896	EIF2AK4	Q9P2K8	1649 aa	Known RBP	40.82	■■■■■ 4.13
PDCD2-209	ENST00000542896	ILDR2	Q71H61	639 aa		40.82	■■■■■ 4.13
PDCD2-209	ENST00000542896	ZC3H13	Q5T200	1668 aa	Known RBP	40.8	■■■■■ 4.12
PDCD2-209	ENST00000542896	SPATA31D1	Q6ZQQ2	1576 aa		40.8	■■■■■ 4.12
PDCD2-209	ENST00000542896	SHANK2	Q9UPX8	1470 aa		40.77	■■■■■ 4.12
PDCD2-209	ENST00000542896	DUOX2	Q9NRD8	1548 aa		40.77	■■■■■ 4.12
PDCD2-209	ENST00000542896	CPS1	P31327	1500 aa		40.76	■■■■■ 4.12
PDCD2-209	ENST00000542896	NPHP4	O75161	1426 aa	Predicted RBP	40.76	■■■■■ 4.11
PDCD2-209	ENST00000542896	ERVK-7	P63135	1459 aa		40.74	■■■■■ 4.11
PDCD2-209	ENST00000542896	MROH1	Q8NDA8	1641 aa		40.73	■■■■■ 4.11
PDCD2-209	ENST00000542896	KIF15	Q9NS87	1388 aa		40.71	■■■■■ 4.11
PDCD2-209	ENST00000542896	MED14	O60244	1454 aa		40.7	■■■■■ 4.11
PDCD2-209	ENST00000542896	ABCC5	O15440	1437 aa		40.69	■■■■■ 4.1
PDCD2-209	ENST00000542896	RRP7BP	Q9NSQ0	103 aa		40.69	■■■■■ 4.1
PDCD2-209	ENST00000542896	SCAF1	Q9H7N4	1312 aa	Known RBP	40.68	■■■■■ 4.1
PDCD2-209	ENST00000542896	DEPDC5	O75140	1603 aa		40.68	■■■■■ 4.1
PDCD2-209	ENST00000542896	TOM1	O60784	492 aa		40.67	■■■■■ 4.1
PDCD2-209	ENST00000542896	PTPN23	Q9H3S7	1636 aa		40.64	■■■■■ 4.1
PDCD2-209	ENST00000542896	PIP4K2B	P78356	416 aa		40.64	■■■■■ 4.1
PDCD2-209	ENST00000542896	ERBIN	Q96RT1	1412 aa		40.64	■■■■■ 4.1
PDCD2-209	ENST00000542896	VWDE	Q8N2E2	1590 aa		40.64	■■■■■ 4.1
PDCD2-209	ENST00000542896	CEP152	O94986	1710 aa		40.63	■■■■■ 4.09
PDCD2-209	ENST00000542896	DAPK1	P53355	1430 aa		40.6	■■■■■ 4.09
PDCD2-209	ENST00000542896	SOCS7	O14512	581 aa		40.6	■■■■■ 4.09
PDCD2-209	ENST00000542896	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	40.59	■■■■■ 4.09
PDCD2-209	ENST00000542896	CROCC2	H7BZ55	1655 aa		40.58	■■■■■ 4.09
PDCD2-209	ENST00000542896	FGD6	Q6ZV73	1430 aa		40.58	■■■■■ 4.09
PDCD2-209	ENST00000542896	PRDM15	P57071	1507 aa	Predicted RBP	40.57	■■■■■ 4.09
PDCD2-209	ENST00000542896	IQGAP1	P46940	1657 aa		40.57	■■■■■ 4.09
PDCD2-209	ENST00000542896	ARHGAP31	Q2M1Z3	1444 aa		40.56	■■■■■ 4.08
PDCD2-209	ENST00000542896	HSPA1L	P34931	641 aa		40.53	■■■■■ 4.08
PDCD2-209	ENST00000542896	KANK1	Q14678	1352 aa		40.51	■■■■■ 4.08
PDCD2-209	ENST00000542896	CHIC2	Q9UKJ5	165 aa		40.51	■■■■■ 4.08
PDCD2-209	ENST00000542896	ANKRD30A	Q9BXX3	1397 aa		40.49	■■■■■ 4.07
PDCD2-209	ENST00000542896	UBR1	Q8IWV7	1749 aa		40.48	■■■■■ 4.07
PDCD2-209	ENST00000542896	CFAP65	Q6ZU64	1925 aa	Known RBP	40.48	■■■■■ 4.07
PDCD2-209	ENST00000542896	SCAF11	Q99590	1463 aa	Known RBP	40.47	■■■■■ 4.07
PDCD2-209	ENST00000542896	TXNDC2	Q86VQ3	553 aa		40.46	■■■■■ 4.07
PDCD2-209	ENST00000542896	LTK	P29376	864 aa		40.42	■■■■■ 4.06
PDCD2-209	ENST00000542896	ARHGAP23	Q9P227	1491 aa		40.41	■■■■■ 4.06
PDCD2-209	ENST00000542896	EID1	Q9Y6B2	187 aa		40.41	■■■■■ 4.06
PDCD2-209	ENST00000542896	STAG3	Q9UJ98	1225 aa		40.4	■■■■■ 4.06
PDCD2-209	ENST00000542896	SLIT1	O75093	1534 aa		40.4	■■■■■ 4.06
PDCD2-209	ENST00000542896	LRRC7	Q96NW7	1537 aa		40.4	■■■■■ 4.06
PDCD2-209	ENST00000542896	STRCP1	A6NGW2	1772 aa		40.35	■■■■■ 4.05
PDCD2-209	ENST00000542896	SYNM	O15061	1565 aa		40.34	■■■■■ 4.05
PDCD2-209	ENST00000542896	LMTK2	Q8IWU2	1503 aa		40.33	■■■■■ 4.05
PDCD2-209	ENST00000542896	ALK	Q9UM73	1620 aa		40.32	■■■■■ 4.05
PDCD2-209	ENST00000542896	FAM50A	Q14320	339 aa	Known RBP	40.32	■■■■■ 4.05
PDCD2-209	ENST00000542896	PIK3C2B	O00750	1634 aa		40.31	■■■■■ 4.04
PDCD2-209	ENST00000542896	TMEM2	Q9UHN6	1383 aa		40.31	■■■■■ 4.04
PDCD2-209	ENST00000542896	IDI1	Q13907	227 aa		40.29	■■■■■ 4.04
PDCD2-209	ENST00000542896	ADGRL2	O95490	1459 aa		40.26	■■■■■ 4.04
PDCD2-209	ENST00000542896	MED1	Q15648	1581 aa	Predicted RBP	40.25	■■■■■ 4.03
PDCD2-209	ENST00000542896	EFCAB6	Q5THR3	1501 aa		40.24	■■■■■ 4.03
PDCD2-209	ENST00000542896	SENP3	Q9H4L4	574 aa	Predicted RBP	40.23	■■■■■ 4.03
PDCD2-209	ENST00000542896	NOS1	P29475	1434 aa		40.2	■■■■■ 4.03
PDCD2-209	ENST00000542896	ANKRD50	Q9ULJ7	1429 aa		40.17	■■■■■ 4.02
PDCD2-209	ENST00000542896	KDM5A	P29375	1690 aa	Known RBP	40.15	■■■■■ 4.02
PDCD2-209	ENST00000542896	SLC52A1	Q9NWF4	448 aa		40.15	■■■■■ 4.02
PDCD2-209	ENST00000542896	PHF23	Q9BUL5	403 aa	Predicted RBP	40.11	■■■■■ 4.01
PDCD2-209	ENST00000542896	SLC26A8	Q96RN1	970 aa		40.09	■■■■■ 4.01
PDCD2-209	ENST00000542896	ADGRB3	O60242	1522 aa		40.09	■■■■■ 4.01
PDCD2-209	ENST00000542896	KCNA6	P17658	529 aa		40.07	■■■■■ 4.01
PDCD2-209	ENST00000542896	RPRD2	Q5VT52	1461 aa	Known RBP	40.07	■■■■■ 4
PDCD2-209	ENST00000542896	BCAN	Q96GW7	911 aa		40.05	■■■■■ 4
PDCD2-209	ENST00000542896	TMEM94	Q12767	1356 aa		40.04	■■■■■ 4
PDCD2-209	ENST00000542896	TET3	O43151	1660 aa		40.02	■■■■■ 4
PDCD2-209	ENST00000542896	PROSER2	Q86WR7	435 aa	Predicted RBP	40	■■■■□ 3.99
PDCD2-209	ENST00000542896	XIRP1	Q702N8	1843 aa	Known RBP	39.99	■■■■□ 3.99
PDCD2-209	ENST00000542896	RBM33	Q96EV2	1170 aa	Known RBP	39.94	■■■■□ 3.98
PDCD2-209	ENST00000542896	HDGF	P51858	240 aa	Known RBP	39.93	■■■■□ 3.98

Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms