RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 FAM50AQ14320 339 aaKnown RBP25.61■■□□□ 1.69
UBC-208ENST00000540700 PTPRKQ15262 1439 aa25.59■■□□□ 1.69
UBC-208ENST00000540700 DNMT1P26358 1616 aaKnown RBP25.59■■□□□ 1.69
UBC-208ENST00000540700 CLTCQ00610 1675 aaKnown RBP25.58■■□□□ 1.69
UBC-208ENST00000540700 ATP7AQ04656 1500 aa25.58■■□□□ 1.69
UBC-208ENST00000540700 DAPK1P53355 1430 aa25.58■■□□□ 1.69
UBC-208ENST00000540700 PPP6R1Q9UPN7 881 aa25.58■■□□□ 1.69
UBC-208ENST00000540700 A2MP01023 1474 aa25.58■■□□□ 1.69
UBC-208ENST00000540700 MYO3AQ8NEV4 1616 aa25.57■■□□□ 1.68
UBC-208ENST00000540700 PLA2R1Q13018 1463 aa25.57■■□□□ 1.68
UBC-208ENST00000540700 SCAF1Q9H7N4 1312 aaKnown RBP25.57■■□□□ 1.68
UBC-208ENST00000540700 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.56■■□□□ 1.681e-15■■■□□ 15.4
UBC-208ENST00000540700 INO80Q9ULG1 1556 aaPredicted RBP25.56■■□□□ 1.68
UBC-208ENST00000540700 CEP170BQ9Y4F5 1589 aaPredicted RBP25.56■■□□□ 1.68
UBC-208ENST00000540700 CROCC2H7BZ55 1655 aa25.55■■□□□ 1.68
UBC-208ENST00000540700 PLXNC1O60486 1568 aa25.52■■□□□ 1.68
UBC-208ENST00000540700 PIP4K2BP78356 416 aa25.52■■□□□ 1.68
UBC-208ENST00000540700 MAST1Q9Y2H9 1570 aa25.52■■□□□ 1.68
UBC-208ENST00000540700 ZNF142P52746 1687 aaPredicted RBP25.52■■□□□ 1.68
UBC-208ENST00000540700 RSPH4AQ5TD94 716 aa25.51■■□□□ 1.67
UBC-208ENST00000540700 SHANK2Q9UPX8 1470 aa25.5■■□□□ 1.67
UBC-208ENST00000540700 HSPA1LP34931 641 aa25.49■■□□□ 1.67
UBC-208ENST00000540700 RTEL1-TNFRSF6BF6WH68 1400 aa25.47■■□□□ 1.67
UBC-208ENST00000540700 ITGAEP38570 1179 aa25.45■■□□□ 1.66
UBC-208ENST00000540700 A2ML1A8K2U0 1454 aa25.45■■□□□ 1.66
UBC-208ENST00000540700 TSPY4P0CV99 314 aa25.44■■□□□ 1.66
UBC-208ENST00000540700 TSPY10P0CW01 314 aa25.44■■□□□ 1.66
UBC-208ENST00000540700 CHIC2Q9UKJ5 165 aa25.44■■□□□ 1.66
UBC-208ENST00000540700 FBXO31Q5XUX0 539 aaPredicted RBP25.43■■□□□ 1.66
UBC-208ENST00000540700 TOM1O60784 492 aa25.42■■□□□ 1.66
UBC-208ENST00000540700 ADGRL2O95490 1459 aa25.4■■□□□ 1.66
UBC-208ENST00000540700 ADGBQ8N7X0 1667 aa25.4■■□□□ 1.66
UBC-208ENST00000540700 TNRQ92752 1358 aa25.39■■□□□ 1.65
UBC-208ENST00000540700 KIF3BO15066 747 aa25.37■■□□□ 1.65
UBC-208ENST00000540700 MED1Q15648 1581 aaPredicted RBP25.36■■□□□ 1.65
UBC-208ENST00000540700 DHX29Q7Z478 1369 aaKnown RBP25.36■■□□□ 1.65
UBC-208ENST00000540700 KIF15Q9NS87 1388 aa25.34■■□□□ 1.65
UBC-208ENST00000540700 ANKLE2Q86XL3 938 aa25.34■■□□□ 1.65
UBC-208ENST00000540700 RRP7BPQ9NSQ0 103 aa25.34■■□□□ 1.65
UBC-208ENST00000540700 CPS1P31327 1500 aa25.33■■□□□ 1.65
UBC-208ENST00000540700 ROCK1Q13464 1354 aa25.32■■□□□ 1.64
UBC-208ENST00000540700 ANKRD30AQ9BXX3 1397 aa25.32■■□□□ 1.64
UBC-208ENST00000540700 SENP3Q9H4L4 574 aaPredicted RBP25.32■■□□□ 1.64
UBC-208ENST00000540700 WASHC2CQ9Y4E1 1318 aa25.32■■□□□ 1.64
UBC-208ENST00000540700 NEURL4Q96JN8 1562 aa25.31■■□□□ 1.64
UBC-208ENST00000540700 PHF23Q9BUL5 403 aaPredicted RBP25.31■■□□□ 1.64
UBC-208ENST00000540700 PZPP20742 1482 aa25.28■■□□□ 1.64
UBC-208ENST00000540700 DUOX2Q9NRD8 1548 aa25.28■■□□□ 1.64
UBC-208ENST00000540700 THEMISQ8N1K5 641 aaPredicted RBP25.28■■□□□ 1.64
UBC-208ENST00000540700 POLR1AO95602 1720 aaPredicted RBP25.26■■□□□ 1.63
UBC-208ENST00000540700 KDM5DQ9BY66 1539 aa25.26■■□□□ 1.63
UBC-208ENST00000540700 NPHP4O75161 1426 aaPredicted RBP25.24■■□□□ 1.63
UBC-208ENST00000540700 NAIPQ13075 1403 aa25.24■■□□□ 1.63
UBC-208ENST00000540700 VWDEQ8N2E2 1590 aa25.23■■□□□ 1.63
UBC-208ENST00000540700 ERBINQ96RT1 1412 aa25.21■■□□□ 1.63
UBC-208ENST00000540700 HFM1A2PYH4 1435 aa25.2■■□□□ 1.63
UBC-208ENST00000540700 UGGT1Q9NYU2 1555 aa25.2■■□□□ 1.62
UBC-208ENST00000540700 FAM135AQ9P2D6 1515 aa25.2■■□□□ 1.62
UBC-208ENST00000540700 NLRP1Q9C000 1473 aa25.2■■□□□ 1.62
UBC-208ENST00000540700 ANKRD50Q9ULJ7 1429 aa25.2■■□□□ 1.62
UBC-208ENST00000540700 GCC2Q8IWJ2 1684 aa25.19■■□□□ 1.62
UBC-208ENST00000540700 EIF2AK4Q9P2K8 1649 aaKnown RBP25.19■■□□□ 1.62
UBC-208ENST00000540700 TRIM26Q12899 539 aaPredicted RBP25.18■■□□□ 1.62
UBC-208ENST00000540700 MROH1Q8NDA8 1641 aa25.17■■□□□ 1.62
UBC-208ENST00000540700 MED14O60244 1454 aa25.16■■□□□ 1.62
UBC-208ENST00000540700 ALKQ9UM73 1620 aa25.16■■□□□ 1.62
UBC-208ENST00000540700 RNF17Q9BXT8 1623 aaKnown RBP25.15■■□□□ 1.62
UBC-208ENST00000540700 DEPDC5O75140 1603 aa25.12■■□□□ 1.61
UBC-208ENST00000540700 LRRC7Q96NW7 1537 aa25.11■■□□□ 1.61
UBC-208ENST00000540700 IQGAP1P46940 1657 aa25.1■■□□□ 1.61
UBC-208ENST00000540700 PRDM15P57071 1507 aaPredicted RBP25.08■■□□□ 1.61
UBC-208ENST00000540700 UNC13BO14795 1591 aa25.06■■□□□ 1.6
UBC-208ENST00000540700 SETD5Q9C0A6 1442 aa25.06■■□□□ 1.6
UBC-208ENST00000540700 STRCP1A6NGW2 1772 aa25.04■■□□□ 1.6
UBC-208ENST00000540700 ABCC3O15438 1527 aa25.04■■□□□ 1.6
UBC-208ENST00000540700 RAB3GAP2Q9H2M9 1393 aa25.03■■□□□ 1.6
UBC-208ENST00000540700 ERVK-7P63135 1459 aa25.02■■□□□ 1.6
UBC-208ENST00000540700 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.02■■□□□ 1.66e-16■□□□□ 10.3
UBC-208ENST00000540700 RGS17Q9UGC6 210 aaPredicted RBP25■■□□□ 1.59
UBC-208ENST00000540700 CEP152O94986 1710 aa24.98■■□□□ 1.59
UBC-208ENST00000540700 SYNMO15061 1565 aa24.98■■□□□ 1.59
UBC-208ENST00000540700 LTKP29376 864 aa24.98■■□□□ 1.59
UBC-208ENST00000540700 TXNDC2Q86VQ3 553 aa24.98■■□□□ 1.59
UBC-208ENST00000540700 SCAF11Q99590 1463 aaKnown RBP24.97■■□□□ 1.59
UBC-208ENST00000540700 PCGF6Q9BYE7 350 aa24.95■■□□□ 1.58
UBC-208ENST00000540700 LMTK2Q8IWU2 1503 aa24.95■■□□□ 1.58
UBC-208ENST00000540700 NUP155O75694 1391 aa24.94■■□□□ 1.58
UBC-208ENST00000540700 IQGAP3Q86VI3 1631 aa24.94■■□□□ 1.58
UBC-208ENST00000540700 ZC3H13Q5T200 1668 aaKnown RBP24.94■■□□□ 1.58
UBC-208ENST00000540700 EID1Q9Y6B2 187 aa24.91■■□□□ 1.58
UBC-208ENST00000540700 KANK1Q14678 1352 aa24.91■■□□□ 1.58
UBC-208ENST00000540700 UBR1Q8IWV7 1749 aa24.9■■□□□ 1.58
UBC-208ENST00000540700 CFAP65Q6ZU64 1925 aaKnown RBP24.9■■□□□ 1.58
UBC-208ENST00000540700 TRIM52Q96A61 297 aa24.88■■□□□ 1.57
UBC-208ENST00000540700 EFCAB6Q5THR3 1501 aa24.87■■□□□ 1.57
UBC-208ENST00000540700 STAG3Q9UJ98 1225 aa24.87■■□□□ 1.57
UBC-208ENST00000540700 ARHGAP23Q9P227 1491 aa24.87■■□□□ 1.57
UBC-208ENST00000540700 TET3O43151 1660 aa24.85■■□□□ 1.57
UBC-208ENST00000540700 HRCP23327 699 aa24.85■■□□□ 1.57
UBC-208ENST00000540700 POTEAQ6S8J7 498 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms