RNA–Protein interactions for RNA: ENST00000540504.2

PSMD3-204, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 3

Gene PSMD3, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-204ENST00000540504 MAST1Q9Y2H9 1570 aa26.34■■□□□ 1.81
PSMD3-204ENST00000540504 CEP170BQ9Y4F5 1589 aaPredicted RBP26.33■■□□□ 1.8
PSMD3-204ENST00000540504 KDM5DQ9BY66 1539 aa26.32■■□□□ 1.8
PSMD3-204ENST00000540504 PLA2R1Q13018 1463 aa26.3■■□□□ 1.8
PSMD3-204ENST00000540504 APLP2Q06481 763 aa26.3■■□□□ 1.8
PSMD3-204ENST00000540504 WASHC2CQ9Y4E1 1318 aa26.28■■□□□ 1.8
PSMD3-204ENST00000540504 PKD2Q13563 968 aa26.27■■□□□ 1.8
PSMD3-204ENST00000540504 PZPP20742 1482 aa26.27■■□□□ 1.8
PSMD3-204ENST00000540504 A2ML1A8K2U0 1454 aa26.25■■□□□ 1.79
PSMD3-204ENST00000540504 RNF17Q9BXT8 1623 aaKnown RBP26.23■■□□□ 1.79
PSMD3-204ENST00000540504 EIF2AK4Q9P2K8 1649 aaKnown RBP26.23■■□□□ 1.79
PSMD3-204ENST00000540504 TCOF1Q13428 1488 aaKnown RBP26.23■■□□□ 1.79
PSMD3-204ENST00000540504 TNRQ92752 1358 aa26.22■■□□□ 1.79
PSMD3-204ENST00000540504 LTBP4Q8N2S1 1624 aa26.22■■□□□ 1.79
PSMD3-204ENST00000540504 NCKAP5LQ9HCH0 1330 aa26.22■■□□□ 1.79
PSMD3-204ENST00000540504 DNMT1P26358 1616 aaKnown RBP26.21■■□□□ 1.79
PSMD3-204ENST00000540504 FBXO31Q5XUX0 539 aaPredicted RBP26.2■■□□□ 1.78
PSMD3-204ENST00000540504 IQSEC2Q5JU85 1478 aa26.19■■□□□ 1.78
PSMD3-204ENST00000540504 ZC3H13Q5T200 1668 aaKnown RBP26.19■■□□□ 1.78
PSMD3-204ENST00000540504 PTPN23Q9H3S7 1636 aa26.17■■□□□ 1.78
PSMD3-204ENST00000540504 DUOX2Q9NRD8 1548 aa26.17■■□□□ 1.78
PSMD3-204ENST00000540504 SHANK2Q9UPX8 1470 aa26.17■■□□□ 1.78
PSMD3-204ENST00000540504 NLRP1Q9C000 1473 aa26.14■■□□□ 1.78
PSMD3-204ENST00000540504 CROCC2H7BZ55 1655 aa26.14■■□□□ 1.78
PSMD3-204ENST00000540504 ABCC3O15438 1527 aa26.14■■□□□ 1.77
PSMD3-204ENST00000540504 ABCC5O15440 1437 aa26.13■■□□□ 1.77
PSMD3-204ENST00000540504 FGD6Q6ZV73 1430 aa26.12■■□□□ 1.77
PSMD3-204ENST00000540504 MROH1Q8NDA8 1641 aa26.11■■□□□ 1.77
PSMD3-204ENST00000540504 KIF15Q9NS87 1388 aa26.1■■□□□ 1.77
PSMD3-204ENST00000540504 POLR1AO95602 1720 aaPredicted RBP26.09■■□□□ 1.77
PSMD3-204ENST00000540504 THEMISQ8N1K5 641 aaPredicted RBP26.09■■□□□ 1.77
PSMD3-204ENST00000540504 SPATA31D1Q6ZQQ2 1576 aa26.08■■□□□ 1.77
PSMD3-204ENST00000540504 DAPK1P53355 1430 aa26.08■■□□□ 1.77
PSMD3-204ENST00000540504 ERBINQ96RT1 1412 aa26.08■■□□□ 1.77
PSMD3-204ENST00000540504 ZNF335Q9H4Z2 1342 aaPredicted RBP26.08■■□□□ 1.77
PSMD3-204ENST00000540504 UGGT1Q9NYU2 1555 aa26.07■■□□□ 1.76
PSMD3-204ENST00000540504 CEP152O94986 1710 aa26.05■■□□□ 1.76
PSMD3-204ENST00000540504 ANKLE2Q86XL3 938 aa26.04■■□□□ 1.76
PSMD3-204ENST00000540504 RRP7BPQ9NSQ0 103 aa26.04■■□□□ 1.76
PSMD3-204ENST00000540504 ERVK-7P63135 1459 aa26.04■■□□□ 1.76
PSMD3-204ENST00000540504 PRDM15P57071 1507 aaPredicted RBP26.04■■□□□ 1.76
PSMD3-204ENST00000540504 NEURL4Q96JN8 1562 aa26.03■■□□□ 1.76
PSMD3-204ENST00000540504 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.02■■□□□ 1.76
PSMD3-204ENST00000540504 DEPDC5O75140 1603 aa26■■□□□ 1.75
PSMD3-204ENST00000540504 ANKRD30AQ9BXX3 1397 aa26■■□□□ 1.75
PSMD3-204ENST00000540504 ARHGAP31Q2M1Z3 1444 aa25.99■■□□□ 1.75
PSMD3-204ENST00000540504 MED14O60244 1454 aa25.98■■□□□ 1.75
PSMD3-204ENST00000540504 KANK1Q14678 1352 aa25.96■■□□□ 1.75
PSMD3-204ENST00000540504 CFAP65Q6ZU64 1925 aaKnown RBP25.95■■□□□ 1.74
PSMD3-204ENST00000540504 NPHP4O75161 1426 aaPredicted RBP25.94■■□□□ 1.74
PSMD3-204ENST00000540504 CPS1P31327 1500 aa25.93■■□□□ 1.74
PSMD3-204ENST00000540504 CHIC2Q9UKJ5 165 aa25.93■■□□□ 1.74
PSMD3-204ENST00000540504 ADGRL2O95490 1459 aa25.92■■□□□ 1.74
PSMD3-204ENST00000540504 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.92■■□□□ 1.74
PSMD3-204ENST00000540504 UBR1Q8IWV7 1749 aa25.91■■□□□ 1.74
PSMD3-204ENST00000540504 UBAP1LF5GYI3 381 aa25.9■■□□□ 1.74
PSMD3-204ENST00000540504 LMTK2Q8IWU2 1503 aa25.89■■□□□ 1.74
PSMD3-204ENST00000540504 IQGAP1P46940 1657 aa25.89■■□□□ 1.73
PSMD3-204ENST00000540504 VWDEQ8N2E2 1590 aa25.88■■□□□ 1.73
PSMD3-204ENST00000540504 FAM50AQ14320 339 aaKnown RBP25.88■■□□□ 1.73
PSMD3-204ENST00000540504 SLIT1O75093 1534 aa25.83■■□□□ 1.73
PSMD3-204ENST00000540504 SCAF11Q99590 1463 aaKnown RBP25.82■■□□□ 1.72
PSMD3-204ENST00000540504 ARHGAP23Q9P227 1491 aa25.82■■□□□ 1.72
PSMD3-204ENST00000540504 KDM5AP29375 1690 aaKnown RBP25.8■■□□□ 1.72
PSMD3-204ENST00000540504 ANKRD50Q9ULJ7 1429 aa25.8■■□□□ 1.72
PSMD3-204ENST00000540504 PIK3C2BO00750 1634 aa25.79■■□□□ 1.72
PSMD3-204ENST00000540504 EFCAB6Q5THR3 1501 aa25.78■■□□□ 1.72
PSMD3-204ENST00000540504 TOM1O60784 492 aa25.78■■□□□ 1.72
PSMD3-204ENST00000540504 TXNDC2Q86VQ3 553 aa25.77■■□□□ 1.72
PSMD3-204ENST00000540504 EID1Q9Y6B2 187 aa25.77■■□□□ 1.72
PSMD3-204ENST00000540504 DISP3Q9P2K9 1392 aa25.77■■□□□ 1.72
PSMD3-204ENST00000540504 NOS1P29475 1434 aa25.75■■□□□ 1.71
PSMD3-204ENST00000540504 LTKP29376 864 aa25.75■■□□□ 1.71
PSMD3-204ENST00000540504 STAG3Q9UJ98 1225 aa25.75■■□□□ 1.71
PSMD3-204ENST00000540504 TMEM2Q9UHN6 1383 aa25.74■■□□□ 1.71
PSMD3-204ENST00000540504 RPRD2Q5VT52 1461 aaKnown RBP25.73■■□□□ 1.71
PSMD3-204ENST00000540504 IDI1Q13907 227 aa25.73■■□□□ 1.71
PSMD3-204ENST00000540504 SYNMO15061 1565 aa25.73■■□□□ 1.71
PSMD3-204ENST00000540504 STRCP1A6NGW2 1772 aa25.72■■□□□ 1.71
PSMD3-204ENST00000540504 SLC52A1Q9NWF4 448 aa25.71■■□□□ 1.71
PSMD3-204ENST00000540504 ROCK1Q13464 1354 aa25.7■■□□□ 1.71
PSMD3-204ENST00000540504 LRRC7Q96NW7 1537 aa25.69■■□□□ 1.7
PSMD3-204ENST00000540504 TET3O43151 1660 aa25.69■■□□□ 1.7
PSMD3-204ENST00000540504 SCAF1Q9H7N4 1312 aaKnown RBP25.67■■□□□ 1.7
PSMD3-204ENST00000540504 UNC13BO14795 1591 aa25.67■■□□□ 1.7
PSMD3-204ENST00000540504 PIP4K2BP78356 416 aa25.67■■□□□ 1.7
PSMD3-204ENST00000540504 ADGRB3O60242 1522 aa25.66■■□□□ 1.7
PSMD3-204ENST00000540504 GCC2Q8IWJ2 1684 aa25.64■■□□□ 1.7
PSMD3-204ENST00000540504 ALKQ9UM73 1620 aa25.61■■□□□ 1.69
PSMD3-204ENST00000540504 HSPA1LP34931 641 aa25.6■■□□□ 1.69
PSMD3-204ENST00000540504 IQGAP3Q86VI3 1631 aa25.57■■□□□ 1.68
PSMD3-204ENST00000540504 ILDR2Q71H61 639 aa25.56■■□□□ 1.68
PSMD3-204ENST00000540504 HDGFP51858 240 aaKnown RBP25.55■■□□□ 1.68
PSMD3-204ENST00000540504 E9PCH4 1651 aa25.55■■□□□ 1.68
PSMD3-204ENST00000540504 ITGAEP38570 1179 aa25.54■■□□□ 1.68
PSMD3-204ENST00000540504 TMEM131LA2VDJ0 1609 aa25.53■■□□□ 1.68
PSMD3-204ENST00000540504 KCNA6P17658 529 aa25.53■■□□□ 1.68
PSMD3-204ENST00000540504 PPARGC1BQ86YN6 1023 aaKnown RBP25.53■■□□□ 1.68
PSMD3-204ENST00000540504 XIRP1Q702N8 1843 aaKnown RBP25.53■■□□□ 1.68
PSMD3-204ENST00000540504 MYO5BQ9ULV0 1848 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms