RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 VGFO15240 615 aaPredicted RBP9.95□□□□□ -0.82
SNHG1-212ENST00000539975 PSEN1P49768 467 aa9.95□□□□□ -0.82
SNHG1-212ENST00000539975 RNF25Q96BH1 459 aaPredicted RBP9.95□□□□□ -0.82
SNHG1-212ENST00000539975 MYT1LQ9UL68 1186 aa9.95□□□□□ -0.82
SNHG1-212ENST00000539975 MAGI3Q5TCQ9 1506 aa9.95□□□□□ -0.82
SNHG1-212ENST00000539975 TIAM1Q13009 1591 aa9.94□□□□□ -0.82
SNHG1-212ENST00000539975 EHBP1L1Q8N3D4 1523 aa9.94□□□□□ -0.82
SNHG1-212ENST00000539975 LRRC9Q6ZRR7 1453 aa9.94□□□□□ -0.82
SNHG1-212ENST00000539975 PLCH2O75038 1416 aa9.94□□□□□ -0.82
SNHG1-212ENST00000539975 KANK4Q5T7N3 995 aaPredicted RBP9.94□□□□□ -0.82
SNHG1-212ENST00000539975 CFAP43Q8NDM7 1665 aa9.93□□□□□ -0.82
SNHG1-212ENST00000539975 ABCA9Q8IUA7 1624 aa9.93□□□□□ -0.82
SNHG1-212ENST00000539975 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.93□□□□□ -0.82
SNHG1-212ENST00000539975 ATN1P54259 1190 aaPredicted RBP9.93□□□□□ -0.82
SNHG1-212ENST00000539975 FANCAO15360 1455 aa9.92□□□□□ -0.82
SNHG1-212ENST00000539975 SLC39A7Q92504 469 aa9.92□□□□□ -0.82
SNHG1-212ENST00000539975 MAP3K4Q9Y6R4 1608 aa9.92□□□□□ -0.82
SNHG1-212ENST00000539975 ARHGAP5Q13017 1502 aa9.92□□□□□ -0.82
SNHG1-212ENST00000539975 NEO1Q92859 1461 aa9.91□□□□□ -0.82
SNHG1-212ENST00000539975 KIF13AQ9H1H9 1805 aa9.91□□□□□ -0.82
SNHG1-212ENST00000539975 RGL2O15211 777 aa9.91□□□□□ -0.82
SNHG1-212ENST00000539975 AKNAQ7Z591 1439 aa9.9□□□□□ -0.82
SNHG1-212ENST00000539975 C7P10643 843 aa9.9□□□□□ -0.82
SNHG1-212ENST00000539975 IER5LQ5T953 404 aa9.9□□□□□ -0.82
SNHG1-212ENST00000539975 NCOA2Q15596 1464 aa9.9□□□□□ -0.83
SNHG1-212ENST00000539975 TSPOAP1O95153 1857 aa9.89□□□□□ -0.83
SNHG1-212ENST00000539975 RSPH4AQ5TD94 716 aa9.89□□□□□ -0.83
SNHG1-212ENST00000539975 PPARGC1BQ86YN6 1023 aaKnown RBP9.89□□□□□ -0.83
SNHG1-212ENST00000539975 PELP1Q8IZL8 1130 aaKnown RBP9.89□□□□□ -0.83
SNHG1-212ENST00000539975 TRIM35Q9UPQ4 493 aa9.89□□□□□ -0.83
SNHG1-212ENST00000539975 TTC37Q6PGP7 1564 aa9.88□□□□□ -0.83
SNHG1-212ENST00000539975 CFAP74Q9C0B2 1584 aa9.88□□□□□ -0.83
SNHG1-212ENST00000539975 SUPT6HQ7KZ85 1726 aaKnown RBP9.88□□□□□ -0.83
SNHG1-212ENST00000539975 LRRIQ1Q96JM4 1722 aa9.88□□□□□ -0.83
SNHG1-212ENST00000539975 RAPGEF3O95398 923 aa9.88□□□□□ -0.83
SNHG1-212ENST00000539975 SCAPERQ9BY12 1400 aa9.88□□□□□ -0.83
SNHG1-212ENST00000539975 ARAP3Q8WWN8 1544 aa9.87□□□□□ -0.83
SNHG1-212ENST00000539975 GPATCH8Q9UKJ3 1502 aaKnown RBP9.87□□□□□ -0.83
SNHG1-212ENST00000539975 DENND4BO75064 1496 aaPredicted RBP9.87□□□□□ -0.83
SNHG1-212ENST00000539975 ADGRL1O94910 1474 aa9.87□□□□□ -0.83
SNHG1-212ENST00000539975 PLEKHH2Q8IVE3 1493 aa9.87□□□□□ -0.83
SNHG1-212ENST00000539975 KDM6BO15054 1643 aa9.87□□□□□ -0.83
SNHG1-212ENST00000539975 TSPY4P0CV99 314 aa9.87□□□□□ -0.83
SNHG1-212ENST00000539975 TSPY10P0CW01 314 aa9.87□□□□□ -0.83
SNHG1-212ENST00000539975 HNRNPMP52272 730 aaKnown RBP eCLIP9.86□□□□□ -0.83
SNHG1-212ENST00000539975 GOLGA2Q08379 1002 aa9.86□□□□□ -0.83
SNHG1-212ENST00000539975 MYO5CQ9NQX4 1742 aa9.85□□□□□ -0.83
SNHG1-212ENST00000539975 MYOM3Q5VTT5 1437 aa9.85□□□□□ -0.83
SNHG1-212ENST00000539975 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.85□□□□□ -0.83
SNHG1-212ENST00000539975 FAM50AQ14320 339 aaKnown RBP9.85□□□□□ -0.83
SNHG1-212ENST00000539975 ZFP91Q96JP5 570 aaPredicted RBP9.85□□□□□ -0.83
SNHG1-212ENST00000539975 RTN4Q9NQC3 1192 aaKnown RBP9.85□□□□□ -0.83
SNHG1-212ENST00000539975 MIA2Q96PC5 1412 aa9.84□□□□□ -0.83
SNHG1-212ENST00000539975 AFAP1Q8N556 730 aa9.84□□□□□ -0.83
SNHG1-212ENST00000539975 MKRN3Q13064 507 aaKnown RBP9.83□□□□□ -0.84
SNHG1-212ENST00000539975 METRNQ9UJH8 293 aa9.83□□□□□ -0.84
SNHG1-212ENST00000539975 ZNF518AQ6AHZ1 1483 aa9.83□□□□□ -0.84
SNHG1-212ENST00000539975 ITSN2Q9NZM3 1697 aa9.83□□□□□ -0.84
SNHG1-212ENST00000539975 SPAG9O60271 1321 aaKnown RBP9.82□□□□□ -0.84
SNHG1-212ENST00000539975 ARID4BQ4LE39 1312 aaPredicted RBP9.82□□□□□ -0.84
SNHG1-212ENST00000539975 ZNF644Q9H582 1327 aaPredicted RBP9.82□□□□□ -0.84
SNHG1-212ENST00000539975 KIAA1107Q9UPP5 1409 aa9.82□□□□□ -0.84
SNHG1-212ENST00000539975 PREX2Q70Z35 1606 aa9.82□□□□□ -0.84
SNHG1-212ENST00000539975 PPRC1Q5VV67 1664 aaKnown RBP9.81□□□□□ -0.84
SNHG1-212ENST00000539975 POGZQ7Z3K3 1410 aa9.81□□□□□ -0.84
SNHG1-212ENST00000539975 COL17A1Q9UMD9 1497 aaPredicted RBP9.8□□□□□ -0.84
SNHG1-212ENST00000539975 STK25O00506 426 aa9.8□□□□□ -0.84
SNHG1-212ENST00000539975 CABP2Q9NPB3 220 aa9.8□□□□□ -0.84
SNHG1-212ENST00000539975 MAGI2Q86UL8 1455 aa9.79□□□□□ -0.84
SNHG1-212ENST00000539975 SEC24BO95487 1268 aa9.79□□□□□ -0.84
SNHG1-212ENST00000539975 BCL11BQ9C0K0 894 aaPredicted RBP9.79□□□□□ -0.84
SNHG1-212ENST00000539975 FGD6Q6ZV73 1430 aa9.79□□□□□ -0.84
SNHG1-212ENST00000539975 CAMSAP2Q08AD1 1489 aa9.79□□□□□ -0.84
SNHG1-212ENST00000539975 ITGAEP38570 1179 aa9.78□□□□□ -0.84
SNHG1-212ENST00000539975 STK24Q9Y6E0 443 aa9.78□□□□□ -0.84
SNHG1-212ENST00000539975 CDC42BPAQ5VT25 1732 aa9.78□□□□□ -0.84
SNHG1-212ENST00000539975 ABCC1P33527 1531 aa9.77□□□□□ -0.84
SNHG1-212ENST00000539975 SYCP2Q9BX26 1530 aa9.77□□□□□ -0.84
SNHG1-212ENST00000539975 CDC42BPBQ9Y5S2 1711 aa9.77□□□□□ -0.85
SNHG1-212ENST00000539975 TRAPPC8Q9Y2L5 1435 aa9.77□□□□□ -0.85
SNHG1-212ENST00000539975 HS6ST3Q8IZP7 471 aa9.77□□□□□ -0.85
SNHG1-212ENST00000539975 ESF1Q9H501 851 aaKnown RBP9.77□□□□□ -0.85
SNHG1-212ENST00000539975 OCEL1Q9H607 264 aa9.77□□□□□ -0.85
SNHG1-212ENST00000539975 SAMD9LQ8IVG5 1584 aa9.76□□□□□ -0.85
SNHG1-212ENST00000539975 SOX12O15370 315 aa9.76□□□□□ -0.85
SNHG1-212ENST00000539975 PLCG2P16885 1265 aa9.76□□□□□ -0.85
SNHG1-212ENST00000539975 IRX5P78411 483 aaPredicted RBP9.76□□□□□ -0.85
SNHG1-212ENST00000539975 CCDC141Q6ZP82 1450 aa9.76□□□□□ -0.85
SNHG1-212ENST00000539975 MLH3Q9UHC1 1453 aa9.74□□□□□ -0.85
SNHG1-212ENST00000539975 ZFYVE16Q7Z3T8 1539 aa9.74□□□□□ -0.85
SNHG1-212ENST00000539975 ARHGEF12Q9NZN5 1544 aa9.74□□□□□ -0.85
SNHG1-212ENST00000539975 ILDR1Q86SU0 546 aaPredicted RBP9.74□□□□□ -0.85
SNHG1-212ENST00000539975 CHIC2Q9UKJ5 165 aa9.74□□□□□ -0.85
SNHG1-212ENST00000539975 RTEL1-TNFRSF6BF6WH68 1400 aa9.73□□□□□ -0.85
SNHG1-212ENST00000539975 ATP10AO60312 1499 aa9.73□□□□□ -0.85
SNHG1-212ENST00000539975 MBD5Q9P267 1494 aa9.73□□□□□ -0.85
SNHG1-212ENST00000539975 CHGAP10645 457 aaKnown RBP9.73□□□□□ -0.85
SNHG1-212ENST00000539975 LHX8Q68G74 356 aa9.73□□□□□ -0.85
SNHG1-212ENST00000539975 EFCAB3Q8N7B9 438 aa9.73□□□□□ -0.85
SNHG1-212ENST00000539975 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms