RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 RTEL1-TNFRSF6BF6WH68 1400 aa24.75■■□□□ 1.55
GNE-204ENST00000539208 DCAF11Q8TEB1 546 aa24.75■■□□□ 1.55
GNE-204ENST00000539208 TRAPPC8Q9Y2L5 1435 aa24.75■■□□□ 1.55
GNE-204ENST00000539208 CARD11Q9BXL7 1154 aa24.74■■□□□ 1.55
GNE-204ENST00000539208 WDR7Q9Y4E6 1490 aa24.74■■□□□ 1.55
GNE-204ENST00000539208 ROCK2O75116 1388 aaKnown RBP24.72■■□□□ 1.55
GNE-204ENST00000539208 DHX29Q7Z478 1369 aaKnown RBP24.71■■□□□ 1.55
GNE-204ENST00000539208 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.7■■□□□ 1.552e-6■□□□□ 8.5
GNE-204ENST00000539208 KDM2AQ9Y2K7 1162 aa24.7■■□□□ 1.55
GNE-204ENST00000539208 PRAG1Q86YV5 1406 aa24.7■■□□□ 1.54
GNE-204ENST00000539208 HNRNPUQ00839 825 aaKnown RBP eCLIP24.69■■□□□ 1.54
GNE-204ENST00000539208 TRPM1Q7Z4N2 1603 aa24.69■■□□□ 1.54
GNE-204ENST00000539208 ABCA9Q8IUA7 1624 aa24.68■■□□□ 1.54
GNE-204ENST00000539208 CCDC184Q52MB2 194 aa24.67■■□□□ 1.54
GNE-204ENST00000539208 ZFYVE16Q7Z3T8 1539 aa24.66■■□□□ 1.54
GNE-204ENST00000539208 SPAG9O60271 1321 aaKnown RBP24.66■■□□□ 1.54
GNE-204ENST00000539208 A2MP01023 1474 aa24.65■■□□□ 1.54
GNE-204ENST00000539208 LAMC1P11047 1609 aa24.64■■□□□ 1.53
GNE-204ENST00000539208 FKBP8Q14318 412 aa24.64■■□□□ 1.53
GNE-204ENST00000539208 MRS2Q9HD23 443 aa24.64■■□□□ 1.53
GNE-204ENST00000539208 GPRASP1Q5JY77 1395 aa24.63■■□□□ 1.53
GNE-204ENST00000539208 NEFLP07196 543 aa24.63■■□□□ 1.53
GNE-204ENST00000539208 ST20-MTHFSA0A0A6YYL1 179 aa24.62■■□□□ 1.53
GNE-204ENST00000539208 FANCAO15360 1455 aa24.61■■□□□ 1.53
GNE-204ENST00000539208 DEPDC5O75140 1603 aa24.6■■□□□ 1.53
GNE-204ENST00000539208 EIF2AK4Q9P2K8 1649 aaKnown RBP24.6■■□□□ 1.53
GNE-204ENST00000539208 AFAP1Q8N556 730 aa24.6■■□□□ 1.53
GNE-204ENST00000539208 INO80Q9ULG1 1556 aaPredicted RBP24.59■■□□□ 1.53
GNE-204ENST00000539208 RGL3Q3MIN7 710 aa24.57■■□□□ 1.52
GNE-204ENST00000539208 ATP7AQ04656 1500 aa24.56■■□□□ 1.52
GNE-204ENST00000539208 ASXL2Q76L83 1435 aa24.56■■□□□ 1.52
GNE-204ENST00000539208 E9PCH4 1651 aa24.56■■□□□ 1.52
GNE-204ENST00000539208 PRDM15P57071 1507 aaPredicted RBP24.54■■□□□ 1.52
GNE-204ENST00000539208 POLR3GLQ9BT43 218 aa24.54■■□□□ 1.52
GNE-204ENST00000539208 FAM9BQ8IZU0 186 aa24.54■■□□□ 1.52
GNE-204ENST00000539208 ZBED9Q6R2W3 1325 aa24.53■■□□□ 1.52
GNE-204ENST00000539208 TRPM2O94759 1503 aa24.53■■□□□ 1.52
GNE-204ENST00000539208 KTN1Q86UP2 1357 aaKnown RBP24.52■■□□□ 1.52
GNE-204ENST00000539208 PTPRTO14522 1441 aa24.52■■□□□ 1.52
GNE-204ENST00000539208 ADGRL1O94910 1474 aa24.52■■□□□ 1.52
GNE-204ENST00000539208 VWDEQ8N2E2 1590 aa24.52■■□□□ 1.52
GNE-204ENST00000539208 TET3O43151 1660 aa24.51■■□□□ 1.51
GNE-204ENST00000539208 SCAPERQ9BY12 1400 aa24.5■■□□□ 1.51
GNE-204ENST00000539208 NBPF1Q3BBV0 1214 aa24.5■■□□□ 1.51
GNE-204ENST00000539208 OSCARQ8IYS5 282 aa24.49■■□□□ 1.51
GNE-204ENST00000539208 STAC3Q96MF2 364 aa24.48■■□□□ 1.51
GNE-204ENST00000539208 SPHKAPQ2M3C7 1700 aa24.48■■□□□ 1.51
GNE-204ENST00000539208 RNF17Q9BXT8 1623 aaKnown RBP24.47■■□□□ 1.51
GNE-204ENST00000539208 KANK1Q14678 1352 aa24.47■■□□□ 1.51
GNE-204ENST00000539208 CEP152O94986 1710 aa24.46■■□□□ 1.51
GNE-204ENST00000539208 BCANQ96GW7 911 aa24.44■■□□□ 1.5
GNE-204ENST00000539208 COL17A1Q9UMD9 1497 aaPredicted RBP24.43■■□□□ 1.5
GNE-204ENST00000539208 RALBP1Q15311 655 aa24.43■■□□□ 1.5
GNE-204ENST00000539208 NEURL4Q96JN8 1562 aa24.43■■□□□ 1.5
GNE-204ENST00000539208 NPM1P06748 294 aaKnown RBP eCLIP24.42■■□□□ 1.5
GNE-204ENST00000539208 TESK2Q96S53 571 aa24.42■■□□□ 1.5
GNE-204ENST00000539208 MADDQ8WXG6 1647 aa24.41■■□□□ 1.5
GNE-204ENST00000539208 CLTCL1P53675 1640 aa24.4■■□□□ 1.5
GNE-204ENST00000539208 MROH1Q8NDA8 1641 aa24.4■■□□□ 1.5
GNE-204ENST00000539208 KIDINS220Q9ULH0 1771 aa24.39■■□□□ 1.49
GNE-204ENST00000539208 ZNF518AQ6AHZ1 1483 aa24.39■■□□□ 1.49
GNE-204ENST00000539208 CFAP74Q9C0B2 1584 aa24.39■■□□□ 1.49
GNE-204ENST00000539208 ERICH6BQ5W0A0 696 aa24.39■■□□□ 1.49
GNE-204ENST00000539208 BRD4O60885 1362 aaPredicted RBP24.38■■□□□ 1.49
GNE-204ENST00000539208 PNISRQ8TF01 805 aaKnown RBP24.38■■□□□ 1.49
GNE-204ENST00000539208 KIF3BO15066 747 aa24.37■■□□□ 1.49
GNE-204ENST00000539208 MYBBP1AQ9BQG0 1328 aaKnown RBP24.37■■□□□ 1.49
GNE-204ENST00000539208 WASHC2CQ9Y4E1 1318 aa24.36■■□□□ 1.49
GNE-204ENST00000539208 TMC1Q8TDI8 760 aa24.35■■□□□ 1.49
GNE-204ENST00000539208 TSHZ2Q9NRE2 1034 aa24.35■■□□□ 1.49
GNE-204ENST00000539208 DISP3Q9P2K9 1392 aa24.34■■□□□ 1.49
GNE-204ENST00000539208 IQGAP1P46940 1657 aa24.34■■□□□ 1.49
GNE-204ENST00000539208 PER1O15534 1290 aaPredicted RBP24.33■■□□□ 1.49
GNE-204ENST00000539208 MYT1LQ9UL68 1186 aa24.33■■□□□ 1.49
GNE-204ENST00000539208 LMTK2Q8IWU2 1503 aa24.33■■□□□ 1.49
GNE-204ENST00000539208 TMF1P82094 1093 aa24.33■■□□□ 1.48
GNE-204ENST00000539208 PARD3Q8TEW0 1356 aa24.32■■□□□ 1.48
GNE-204ENST00000539208 CD109Q6YHK3 1445 aa24.32■■□□□ 1.48
GNE-204ENST00000539208 LRPPRCP42704 1394 aaKnown RBP24.32■■□□□ 1.48
GNE-204ENST00000539208 CNGB1Q14028 1251 aaPredicted RBP24.31■■□□□ 1.48
GNE-204ENST00000539208 EFCAB6Q5THR3 1501 aa24.31■■□□□ 1.48
GNE-204ENST00000539208 KIAA1210Q9ULL0 1709 aa24.3■■□□□ 1.48
GNE-204ENST00000539208 SMG6Q86US8 1419 aaKnown RBP24.29■■□□□ 1.48
GNE-204ENST00000539208 POGZQ7Z3K3 1410 aa24.29■■□□□ 1.48
GNE-204ENST00000539208 MLH3Q9UHC1 1453 aa24.29■■□□□ 1.48
GNE-204ENST00000539208 SCAF11Q99590 1463 aaKnown RBP24.27■■□□□ 1.48
GNE-204ENST00000539208 NLRP13Q86W25 1043 aa24.26■■□□□ 1.47
GNE-204ENST00000539208 MYOM2P54296 1465 aa24.25■■□□□ 1.47
GNE-204ENST00000539208 PPRC1Q5VV67 1664 aaKnown RBP24.24■■□□□ 1.47
GNE-204ENST00000539208 KIF1BO60333 1816 aa24.22■■□□□ 1.47
GNE-204ENST00000539208 HECW2Q9P2P5 1572 aa24.22■■□□□ 1.47
GNE-204ENST00000539208 PANK3Q9H999 370 aa24.21■■□□□ 1.47
GNE-204ENST00000539208 MAP3K4Q9Y6R4 1608 aa24.21■■□□□ 1.47
GNE-204ENST00000539208 NEO1Q92859 1461 aa24.21■■□□□ 1.47
GNE-204ENST00000539208 NUDCQ9Y266 331 aa24.2■■□□□ 1.47
GNE-204ENST00000539208 FRMPD1Q5SYB0 1578 aa24.2■■□□□ 1.46
GNE-204ENST00000539208 CDCA8Q53HL2 280 aa24.19■■□□□ 1.46
GNE-204ENST00000539208 IFT172Q9UG01 1749 aa24.19■■□□□ 1.46
GNE-204ENST00000539208 EIF3AQ14152 1382 aaKnown RBP24.18■■□□□ 1.46
GNE-204ENST00000539208 IRX6P78412 446 aaPredicted RBP24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms