RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 CROCC2H7BZ55 1655 aa13.72□□□□□ -0.21
DDB1-212ENST00000538470 GGT6Q6P531 493 aa13.72□□□□□ -0.21
DDB1-212ENST00000538470 IQSEC2Q5JU85 1478 aa13.72□□□□□ -0.21
DDB1-212ENST00000538470 MYOM3Q5VTT5 1437 aa13.72□□□□□ -0.21
DDB1-212ENST00000538470 POLR1AO95602 1720 aaPredicted RBP13.71□□□□□ -0.21
DDB1-212ENST00000538470 PZPP20742 1482 aa13.71□□□□□ -0.21
DDB1-212ENST00000538470 TCOF1Q13428 1488 aaKnown RBP13.7□□□□□ -0.22
DDB1-212ENST00000538470 LTBP4Q8N2S1 1624 aa13.7□□□□□ -0.22
DDB1-212ENST00000538470 A2ML1A8K2U0 1454 aa13.69□□□□□ -0.22
DDB1-212ENST00000538470 LOC105371045A0A1W2PR82 267 aa13.69□□□□□ -0.22
DDB1-212ENST00000538470 DNMT1P26358 1616 aaKnown RBP13.68□□□□□ -0.22
DDB1-212ENST00000538470 SHANK2Q9UPX8 1470 aa13.67□□□□□ -0.22
DDB1-212ENST00000538470 TSPY4P0CV99 314 aa13.67□□□□□ -0.22
DDB1-212ENST00000538470 TSPY10P0CW01 314 aa13.67□□□□□ -0.22
DDB1-212ENST00000538470 MROH1Q8NDA8 1641 aa13.66□□□□□ -0.22
DDB1-212ENST00000538470 PTPN23Q9H3S7 1636 aa13.66□□□□□ -0.22
DDB1-212ENST00000538470 KIF3BO15066 747 aa13.66□□□□□ -0.22
DDB1-212ENST00000538470 ABCC3O15438 1527 aa13.65□□□□□ -0.22
DDB1-212ENST00000538470 DUOX2Q9NRD8 1548 aa13.65□□□□□ -0.22
DDB1-212ENST00000538470 TNRQ92752 1358 aa13.65□□□□□ -0.22
DDB1-212ENST00000538470 NLRP1Q9C000 1473 aa13.65□□□□□ -0.22
DDB1-212ENST00000538470 PKD2Q13563 968 aa13.64□□□□□ -0.23
DDB1-212ENST00000538470 CEP152O94986 1710 aa13.64□□□□□ -0.23
DDB1-212ENST00000538470 KANK4Q5T7N3 995 aaPredicted RBP13.63□□□□□ -0.23
DDB1-212ENST00000538470 PRDM15P57071 1507 aaPredicted RBP13.63□□□□□ -0.23
DDB1-212ENST00000538470 WASHC2CQ9Y4E1 1318 aa13.63□□□□□ -0.23
DDB1-212ENST00000538470 SPATA31D1Q6ZQQ2 1576 aa13.62□□□□□ -0.23
DDB1-212ENST00000538470 NEURL4Q96JN8 1562 aa13.62□□□□□ -0.23
DDB1-212ENST00000538470 DEPDC5O75140 1603 aa13.61□□□□□ -0.23
DDB1-212ENST00000538470 ERBINQ96RT1 1412 aa13.61□□□□□ -0.23
DDB1-212ENST00000538470 APLP2Q06481 763 aa13.6□□□□□ -0.23
DDB1-212ENST00000538470 UGGT1Q9NYU2 1555 aa13.6□□□□□ -0.23
DDB1-212ENST00000538470 NCKAP5LQ9HCH0 1330 aa13.6□□□□□ -0.23
DDB1-212ENST00000538470 FGD6Q6ZV73 1430 aa13.59□□□□□ -0.23
DDB1-212ENST00000538470 ERVK-7P63135 1459 aa13.59□□□□□ -0.23
DDB1-212ENST00000538470 DAPK1P53355 1430 aa13.58□□□□□ -0.24
DDB1-212ENST00000538470 KIF15Q9NS87 1388 aa13.58□□□□□ -0.24
DDB1-212ENST00000538470 ABCC5O15440 1437 aa13.57□□□□□ -0.24
DDB1-212ENST00000538470 CPS1P31327 1500 aa13.56□□□□□ -0.24
DDB1-212ENST00000538470 FBXO31Q5XUX0 539 aaPredicted RBP13.56□□□□□ -0.24
DDB1-212ENST00000538470 IQGAP1P46940 1657 aa13.56□□□□□ -0.24
DDB1-212ENST00000538470 MED14O60244 1454 aa13.55□□□□□ -0.24
DDB1-212ENST00000538470 ZNF335Q9H4Z2 1342 aaPredicted RBP13.55□□□□□ -0.24
DDB1-212ENST00000538470 UBR1Q8IWV7 1749 aa13.55□□□□□ -0.24
DDB1-212ENST00000538470 ARHGAP31Q2M1Z3 1444 aa13.55□□□□□ -0.24
DDB1-212ENST00000538470 CFAP65Q6ZU64 1925 aaKnown RBP13.54□□□□□ -0.24
DDB1-212ENST00000538470 THEMISQ8N1K5 641 aaPredicted RBP13.53□□□□□ -0.24
DDB1-212ENST00000538470 ADGRL2O95490 1459 aa13.53□□□□□ -0.24
DDB1-212ENST00000538470 LMTK2Q8IWU2 1503 aa13.53□□□□□ -0.24
DDB1-212ENST00000538470 KDM5AP29375 1690 aaKnown RBP13.53□□□□□ -0.24
DDB1-212ENST00000538470 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.52□□□□□ -0.25
DDB1-212ENST00000538470 SYNMO15061 1565 aa13.52□□□□□ -0.25
DDB1-212ENST00000538470 VWDEQ8N2E2 1590 aa13.52□□□□□ -0.25
DDB1-212ENST00000538470 NPHP4O75161 1426 aaPredicted RBP13.51□□□□□ -0.25
DDB1-212ENST00000538470 ANKRD30AQ9BXX3 1397 aa13.51□□□□□ -0.25
DDB1-212ENST00000538470 ANKLE2Q86XL3 938 aa13.5□□□□□ -0.25
DDB1-212ENST00000538470 SLIT1O75093 1534 aa13.49□□□□□ -0.25
DDB1-212ENST00000538470 KANK1Q14678 1352 aa13.49□□□□□ -0.25
DDB1-212ENST00000538470 EFCAB6Q5THR3 1501 aa13.49□□□□□ -0.25
DDB1-212ENST00000538470 PIK3C2BO00750 1634 aa13.48□□□□□ -0.25
DDB1-212ENST00000538470 SCAF11Q99590 1463 aaKnown RBP13.47□□□□□ -0.25
DDB1-212ENST00000538470 ARHGAP23Q9P227 1491 aa13.47□□□□□ -0.25
DDB1-212ENST00000538470 RRP7BPQ9NSQ0 103 aa13.46□□□□□ -0.25
DDB1-212ENST00000538470 STRCP1A6NGW2 1772 aa13.45□□□□□ -0.26
DDB1-212ENST00000538470 GCC2Q8IWJ2 1684 aa13.44□□□□□ -0.26
DDB1-212ENST00000538470 UBAP1LF5GYI3 381 aa13.44□□□□□ -0.26
DDB1-212ENST00000538470 UNC13BO14795 1591 aa13.44□□□□□ -0.26
DDB1-212ENST00000538470 TET3O43151 1660 aa13.44□□□□□ -0.26
DDB1-212ENST00000538470 RPRD2Q5VT52 1461 aaKnown RBP13.43□□□□□ -0.26
DDB1-212ENST00000538470 ADGRB3O60242 1522 aa13.43□□□□□ -0.26
DDB1-212ENST00000538470 NOS1P29475 1434 aa13.41□□□□□ -0.26
DDB1-212ENST00000538470 ANKRD50Q9ULJ7 1429 aa13.41□□□□□ -0.26
DDB1-212ENST00000538470 DISP3Q9P2K9 1392 aa13.41□□□□□ -0.26
DDB1-212ENST00000538470 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.4□□□□□ -0.26
DDB1-212ENST00000538470 CHIC2Q9UKJ5 165 aa13.4□□□□□ -0.26
DDB1-212ENST00000538470 LRRC7Q96NW7 1537 aa13.39□□□□□ -0.27
DDB1-212ENST00000538470 TOM1O60784 492 aa13.39□□□□□ -0.27
DDB1-212ENST00000538470 TMEM2Q9UHN6 1383 aa13.39□□□□□ -0.27
DDB1-212ENST00000538470 ALKQ9UM73 1620 aa13.39□□□□□ -0.27
DDB1-212ENST00000538470 FAM50AQ14320 339 aaKnown RBP13.38□□□□□ -0.27
DDB1-212ENST00000538470 XIRP1Q702N8 1843 aaKnown RBP13.38□□□□□ -0.27
DDB1-212ENST00000538470 IQGAP3Q86VI3 1631 aa13.38□□□□□ -0.27
DDB1-212ENST00000538470 ROCK1Q13464 1354 aa13.37□□□□□ -0.27
DDB1-212ENST00000538470 EID1Q9Y6B2 187 aa13.37□□□□□ -0.27
DDB1-212ENST00000538470 MYO5BQ9ULV0 1848 aa13.36□□□□□ -0.27
DDB1-212ENST00000538470 E9PCH4 1651 aa13.35□□□□□ -0.27
DDB1-212ENST00000538470 NWD1Q149M9 1564 aa13.35□□□□□ -0.27
DDB1-212ENST00000538470 LTKP29376 864 aa13.34□□□□□ -0.27
DDB1-212ENST00000538470 TXNDC2Q86VQ3 553 aa13.34□□□□□ -0.27
DDB1-212ENST00000538470 STAG3Q9UJ98 1225 aa13.34□□□□□ -0.27
DDB1-212ENST00000538470 SLC52A1Q9NWF4 448 aa13.33□□□□□ -0.28
DDB1-212ENST00000538470 MED1Q15648 1581 aaPredicted RBP13.32□□□□□ -0.28
DDB1-212ENST00000538470 TMEM131LA2VDJ0 1609 aa13.32□□□□□ -0.28
DDB1-212ENST00000538470 NKTRP30414 1462 aaKnown RBP13.32□□□□□ -0.28
DDB1-212ENST00000538470 IDI1Q13907 227 aa13.32□□□□□ -0.28
DDB1-212ENST00000538470 SCAF1Q9H7N4 1312 aaKnown RBP13.32□□□□□ -0.28
DDB1-212ENST00000538470 PIP4K2BP78356 416 aa13.3□□□□□ -0.28
DDB1-212ENST00000538470 ZFYVE9O95405 1425 aa13.3□□□□□ -0.28
DDB1-212ENST00000538470 DIP2AQ14689 1571 aa13.28□□□□□ -0.28
DDB1-212ENST00000538470 SPHKAPQ2M3C7 1700 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms