RNA–Protein interactions for RNA: ENST00000538335.1

LINC01089-207, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 3 BASIC

Gene LINC01089, Length 630 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-207ENST00000538335 CERKQ8TCT0 537 aa44.09■■■■■ 4.65
LINC01089-207ENST00000538335 MYO3AQ8NEV4 1616 aa44.05■■■■■ 4.64
LINC01089-207ENST00000538335 CAMSAP1Q5T5Y3 1602 aa44.03■■■■■ 4.64
LINC01089-207ENST00000538335 ZNF142P52746 1687 aaPredicted RBP44.01■■■■■ 4.64
LINC01089-207ENST00000538335 PZPP20742 1482 aa44■■■■■ 4.63
LINC01089-207ENST00000538335 CEP170BQ9Y4F5 1589 aaPredicted RBP44■■■■■ 4.63
LINC01089-207ENST00000538335 PTPN23Q9H3S7 1636 aa43.99■■■■■ 4.63
LINC01089-207ENST00000538335 SHANK2Q9UPX8 1470 aa43.96■■■■■ 4.63
LINC01089-207ENST00000538335 FGD6Q6ZV73 1430 aa43.96■■■■■ 4.63
LINC01089-207ENST00000538335 PLA2R1Q13018 1463 aa43.96■■■■■ 4.63
LINC01089-207ENST00000538335 EIF2AK4Q9P2K8 1649 aaKnown RBP43.95■■■■■ 4.63
LINC01089-207ENST00000538335 TNRQ92752 1358 aa43.94■■■■■ 4.63
LINC01089-207ENST00000538335 PKD2Q13563 968 aa43.94■■■■■ 4.62
LINC01089-207ENST00000538335 DUOX2Q9NRD8 1548 aa43.94■■■■■ 4.62
LINC01089-207ENST00000538335 RNF17Q9BXT8 1623 aaKnown RBP43.93■■■■■ 4.62
LINC01089-207ENST00000538335 A2ML1A8K2U0 1454 aa43.93■■■■■ 4.62
LINC01089-207ENST00000538335 ABCC5O15440 1437 aa43.9■■■■■ 4.62
LINC01089-207ENST00000538335 TCOF1Q13428 1488 aaKnown RBP43.89■■■■■ 4.62
LINC01089-207ENST00000538335 FBXO31Q5XUX0 539 aaPredicted RBP43.88■■■■■ 4.62
LINC01089-207ENST00000538335 KIF15Q9NS87 1388 aa43.88■■■■■ 4.61
LINC01089-207ENST00000538335 ZC3H13Q5T200 1668 aaKnown RBP43.85■■■■■ 4.61
LINC01089-207ENST00000538335 DAPK1P53355 1430 aa43.85■■■■■ 4.61
LINC01089-207ENST00000538335 NCKAP5LQ9HCH0 1330 aa43.85■■■■■ 4.61
LINC01089-207ENST00000538335 CROCC2H7BZ55 1655 aa43.84■■■■■ 4.61
LINC01089-207ENST00000538335 ERBINQ96RT1 1412 aa43.82■■■■■ 4.6
LINC01089-207ENST00000538335 DNMT1P26358 1616 aaKnown RBP43.81■■■■■ 4.6
LINC01089-207ENST00000538335 ABCC3O15438 1527 aa43.81■■■■■ 4.6
LINC01089-207ENST00000538335 RRP7BPQ9NSQ0 103 aa43.8■■■■■ 4.6
LINC01089-207ENST00000538335 NLRP1Q9C000 1473 aa43.78■■■■■ 4.6
LINC01089-207ENST00000538335 ANKRD30AQ9BXX3 1397 aa43.76■■■■■ 4.6
LINC01089-207ENST00000538335 MROH1Q8NDA8 1641 aa43.71■■■■■ 4.59
LINC01089-207ENST00000538335 THEMISQ8N1K5 641 aaPredicted RBP43.71■■■■■ 4.59
LINC01089-207ENST00000538335 LTBP4Q8N2S1 1624 aa43.67■■■■■ 4.58
LINC01089-207ENST00000538335 CHIC2Q9UKJ5 165 aa43.66■■■■■ 4.58
LINC01089-207ENST00000538335 PRDM15P57071 1507 aaPredicted RBP43.65■■■■■ 4.58
LINC01089-207ENST00000538335 FAM50AQ14320 339 aaKnown RBP43.65■■■■■ 4.58
LINC01089-207ENST00000538335 SPATA31D1Q6ZQQ2 1576 aa43.65■■■■■ 4.58
LINC01089-207ENST00000538335 KANK1Q14678 1352 aa43.65■■■■■ 4.58
LINC01089-207ENST00000538335 IQSEC2Q5JU85 1478 aa43.64■■■■■ 4.58
LINC01089-207ENST00000538335 UGGT1Q9NYU2 1555 aa43.63■■■■■ 4.58
LINC01089-207ENST00000538335 ERVK-7P63135 1459 aa43.63■■■■■ 4.57
LINC01089-207ENST00000538335 ANKLE2Q86XL3 938 aa43.62■■■■■ 4.57
LINC01089-207ENST00000538335 CEP152O94986 1710 aa43.59■■■■■ 4.57
LINC01089-207ENST00000538335 GRWD1Q9BQ67 446 aaKnown RBP eCLIP43.59■■■■■ 4.572e-10■□□□□ 10.5
LINC01089-207ENST00000538335 ARHGAP31Q2M1Z3 1444 aa43.57■■■■■ 4.57
LINC01089-207ENST00000538335 ZNF335Q9H4Z2 1342 aaPredicted RBP43.57■■■■■ 4.57
LINC01089-207ENST00000538335 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP43.56■■■■■ 4.563e-6■■□□□ 12.8
LINC01089-207ENST00000538335 ADGRL2O95490 1459 aa43.55■■■■■ 4.56
LINC01089-207ENST00000538335 POLR1AO95602 1720 aaPredicted RBP43.54■■■■■ 4.56
LINC01089-207ENST00000538335 DEPDC5O75140 1603 aa43.53■■■■■ 4.56
LINC01089-207ENST00000538335 NEURL4Q96JN8 1562 aa43.46■■■■■ 4.55
LINC01089-207ENST00000538335 LMTK2Q8IWU2 1503 aa43.42■■■■■ 4.54
LINC01089-207ENST00000538335 CFAP65Q6ZU64 1925 aaKnown RBP43.41■■■■■ 4.54
LINC01089-207ENST00000538335 NPHP4O75161 1426 aaPredicted RBP43.4■■■■■ 4.54
LINC01089-207ENST00000538335 MED14O60244 1454 aa43.4■■■■■ 4.54
LINC01089-207ENST00000538335 ANKRD50Q9ULJ7 1429 aa43.39■■■■■ 4.54
LINC01089-207ENST00000538335 VWDEQ8N2E2 1590 aa43.37■■■■■ 4.53
LINC01089-207ENST00000538335 CPS1P31327 1500 aa43.32■■■■■ 4.53
LINC01089-207ENST00000538335 UBR1Q8IWV7 1749 aa43.3■■■■■ 4.52
LINC01089-207ENST00000538335 STAG3Q9UJ98 1225 aa43.28■■■■■ 4.52
LINC01089-207ENST00000538335 UBAP1LF5GYI3 381 aa43.27■■■■■ 4.52
LINC01089-207ENST00000538335 ROCK1Q13464 1354 aa43.27■■■■■ 4.52
LINC01089-207ENST00000538335 IQGAP1P46940 1657 aa43.27■■■■■ 4.52
LINC01089-207ENST00000538335 EFCAB6Q5THR3 1501 aa43.25■■■■■ 4.51
LINC01089-207ENST00000538335 SCAF11Q99590 1463 aaKnown RBP43.25■■■■■ 4.51
LINC01089-207ENST00000538335 EID1Q9Y6B2 187 aa43.24■■■■■ 4.51
LINC01089-207ENST00000538335 SLIT1O75093 1534 aa43.22■■■■■ 4.51
LINC01089-207ENST00000538335 ARHGAP23Q9P227 1491 aa43.2■■■■■ 4.51
LINC01089-207ENST00000538335 TXNDC2Q86VQ3 553 aa43.2■■■■■ 4.51
LINC01089-207ENST00000538335 RPRD2Q5VT52 1461 aaKnown RBP43.19■■■■■ 4.5
LINC01089-207ENST00000538335 NOS1P29475 1434 aa43.17■■■■■ 4.5
LINC01089-207ENST00000538335 PIK3C2BO00750 1634 aa43.16■■■■■ 4.5
LINC01089-207ENST00000538335 PPARGC1BQ86YN6 1023 aaKnown RBP43.16■■■■■ 4.5
LINC01089-207ENST00000538335 SLC52A1Q9NWF4 448 aa43.16■■■■■ 4.5
LINC01089-207ENST00000538335 IDI1Q13907 227 aa43.15■■■■■ 4.5
LINC01089-207ENST00000538335 TMEM2Q9UHN6 1383 aa43.14■■■■■ 4.5
LINC01089-207ENST00000538335 KDM5AP29375 1690 aaKnown RBP43.13■■■■■ 4.49
LINC01089-207ENST00000538335 LTKP29376 864 aa43.11■■■■■ 4.49
LINC01089-207ENST00000538335 ITGAEP38570 1179 aa43.11■■■■■ 4.49
LINC01089-207ENST00000538335 SYNMO15061 1565 aa43.09■■■■■ 4.49
LINC01089-207ENST00000538335 TOM1O60784 492 aa43.09■■■■■ 4.49
LINC01089-207ENST00000538335 TET3O43151 1660 aa43.08■■■■■ 4.49
LINC01089-207ENST00000538335 UNC13BO14795 1591 aa43.08■■■■■ 4.49
LINC01089-207ENST00000538335 ADGRB3O60242 1522 aa43.02■■■■■ 4.48
LINC01089-207ENST00000538335 GCC2Q8IWJ2 1684 aa42.99■■■■■ 4.47
LINC01089-207ENST00000538335 SCAF1Q9H7N4 1312 aaKnown RBP42.96■■■■■ 4.47
LINC01089-207ENST00000538335 NUP155O75694 1391 aa42.94■■■■■ 4.46
LINC01089-207ENST00000538335 RRBP1Q9P2E9 1410 aaKnown RBP42.92■■■■■ 4.46
LINC01089-207ENST00000538335 IQGAP3Q86VI3 1631 aa42.92■■■■■ 4.46
LINC01089-207ENST00000538335 LRRC7Q96NW7 1537 aa42.92■■■■■ 4.46
LINC01089-207ENST00000538335 HDGFP51858 240 aaKnown RBP42.91■■■■■ 4.46
LINC01089-207ENST00000538335 PIP4K2BP78356 416 aa42.9■■■■■ 4.46
LINC01089-207ENST00000538335 DISP3Q9P2K9 1392 aa42.88■■■■■ 4.45
LINC01089-207ENST00000538335 STRCP1A6NGW2 1772 aa42.86■■■■■ 4.45
LINC01089-207ENST00000538335 BCANQ96GW7 911 aa42.82■■■■■ 4.45
LINC01089-207ENST00000538335 E9PCH4 1651 aa42.82■■■■■ 4.44
LINC01089-207ENST00000538335 PPP1R15AO75807 674 aaPredicted RBP42.79■■■■■ 4.44
LINC01089-207ENST00000538335 CHGAP10645 457 aaKnown RBP42.78■■■■■ 4.44
LINC01089-207ENST00000538335 ABCF1Q8NE71 845 aaKnown RBP eCLIP42.77■■■■■ 4.44
LINC01089-207ENST00000538335 SLC26A8Q96RN1 970 aa42.76■■■■■ 4.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms