RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 NPATQ14207 1427 aa5.23□□□□□ -1.57
PTPN22-211ENST00000538253 KIF3BO15066 747 aa5.23□□□□□ -1.57
PTPN22-211ENST00000538253 TRIM26Q12899 539 aaPredicted RBP5.22□□□□□ -1.57
PTPN22-211ENST00000538253 ABCC5O15440 1437 aa5.22□□□□□ -1.57
PTPN22-211ENST00000538253 ANKRD50Q9ULJ7 1429 aa5.22□□□□□ -1.57
PTPN22-211ENST00000538253 PPRC1Q5VV67 1664 aaKnown RBP5.22□□□□□ -1.57
PTPN22-211ENST00000538253 SLC52A1Q9NWF4 448 aa5.22□□□□□ -1.57
PTPN22-211ENST00000538253 INO80Q9ULG1 1556 aaPredicted RBP5.22□□□□□ -1.57
PTPN22-211ENST00000538253 C1QBPQ07021 282 aaKnown RBP5.21□□□□□ -1.57
PTPN22-211ENST00000538253 RTN4Q9NQC3 1192 aaKnown RBP5.21□□□□□ -1.57
PTPN22-211ENST00000538253 CDC42BPBQ9Y5S2 1711 aa5.21□□□□□ -1.57
PTPN22-211ENST00000538253 SCAF1Q9H7N4 1312 aaKnown RBP5.21□□□□□ -1.57
PTPN22-211ENST00000538253 RICTORQ6R327 1708 aa5.21□□□□□ -1.58
PTPN22-211ENST00000538253 NCOA1Q15788 1441 aa5.21□□□□□ -1.58
PTPN22-211ENST00000538253 SOCS7O14512 581 aa5.21□□□□□ -1.58
PTPN22-211ENST00000538253 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.21□□□□□ -1.58
PTPN22-211ENST00000538253 RPRD2Q5VT52 1461 aaKnown RBP5.21□□□□□ -1.58
PTPN22-211ENST00000538253 STAG3Q9UJ98 1225 aa5.21□□□□□ -1.58
PTPN22-211ENST00000538253 KDM5DQ9BY66 1539 aa5.21□□□□□ -1.58
PTPN22-211ENST00000538253 ARHGAP31Q2M1Z3 1444 aa5.2□□□□□ -1.58
PTPN22-211ENST00000538253 DIP2CQ9Y2E4 1556 aa5.2□□□□□ -1.58
PTPN22-211ENST00000538253 HFM1A2PYH4 1435 aa5.2□□□□□ -1.58
PTPN22-211ENST00000538253 GGT6Q6P531 493 aa5.2□□□□□ -1.58
PTPN22-211ENST00000538253 THEMISQ8N1K5 641 aaPredicted RBP5.2□□□□□ -1.58
PTPN22-211ENST00000538253 TRIM52Q96A61 297 aa5.2□□□□□ -1.58
PTPN22-211ENST00000538253 ZC3H13Q5T200 1668 aaKnown RBP5.2□□□□□ -1.58
PTPN22-211ENST00000538253 SETD5Q9C0A6 1442 aa5.19□□□□□ -1.58
PTPN22-211ENST00000538253 RRP7BPQ9NSQ0 103 aa5.19□□□□□ -1.58
PTPN22-211ENST00000538253 EID1Q9Y6B2 187 aa5.19□□□□□ -1.58
PTPN22-211ENST00000538253 UHRF1BP1Q6BDS2 1440 aa5.19□□□□□ -1.58
PTPN22-211ENST00000538253 NLRP1Q9C000 1473 aa5.19□□□□□ -1.58
PTPN22-211ENST00000538253 ARHGEF12Q9NZN5 1544 aa5.19□□□□□ -1.58
PTPN22-211ENST00000538253 PKD2Q13563 968 aa5.19□□□□□ -1.58
PTPN22-211ENST00000538253 BCORL1Q5H9F3 1711 aa5.19□□□□□ -1.58
PTPN22-211ENST00000538253 LRRIQ1Q96JM4 1722 aa5.18□□□□□ -1.58
PTPN22-211ENST00000538253 LMTK2Q8IWU2 1503 aa5.18□□□□□ -1.58
PTPN22-211ENST00000538253 YEATS2Q9ULM3 1422 aa5.18□□□□□ -1.58
PTPN22-211ENST00000538253 ZNF644Q9H582 1327 aaPredicted RBP5.18□□□□□ -1.58
PTPN22-211ENST00000538253 CLSPNQ9HAW4 1339 aa5.18□□□□□ -1.58
PTPN22-211ENST00000538253 FRMPD1Q5SYB0 1578 aa5.18□□□□□ -1.58
PTPN22-211ENST00000538253 COL17A1Q9UMD9 1497 aaPredicted RBP5.18□□□□□ -1.58
PTPN22-211ENST00000538253 NUP155O75694 1391 aa5.18□□□□□ -1.58
PTPN22-211ENST00000538253 RPGRIP1LQ68CZ1 1315 aa5.18□□□□□ -1.58
PTPN22-211ENST00000538253 ITGAEP38570 1179 aa5.18□□□□□ -1.58
PTPN22-211ENST00000538253 TNRQ92752 1358 aa5.18□□□□□ -1.58
PTPN22-211ENST00000538253 MLECQ14165 292 aa5.17□□□□□ -1.58
PTPN22-211ENST00000538253 CHIC2Q9UKJ5 165 aa5.17□□□□□ -1.58
PTPN22-211ENST00000538253 MROH2AA6NES4 1674 aa5.17□□□□□ -1.58
PTPN22-211ENST00000538253 KLHL34Q8N239 644 aa5.17□□□□□ -1.58
PTPN22-211ENST00000538253 PZPP20742 1482 aa5.17□□□□□ -1.58
PTPN22-211ENST00000538253 CROCC2H7BZ55 1655 aa5.17□□□□□ -1.58
PTPN22-211ENST00000538253 RNF17Q9BXT8 1623 aaKnown RBP5.17□□□□□ -1.58
PTPN22-211ENST00000538253 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.16□□□□□ -1.58
PTPN22-211ENST00000538253 SLC4A1APQ9BWU0 796 aaKnown RBP5.16□□□□□ -1.58
PTPN22-211ENST00000538253 ZMYM3Q14202 1370 aa5.16□□□□□ -1.58
PTPN22-211ENST00000538253 KIDINS220Q9ULH0 1771 aa5.16□□□□□ -1.58
PTPN22-211ENST00000538253 TIMELESSQ9UNS1 1208 aa5.16□□□□□ -1.58
PTPN22-211ENST00000538253 PRDM15P57071 1507 aaPredicted RBP5.16□□□□□ -1.58
PTPN22-211ENST00000538253 LMTK3Q96Q04 1460 aa5.15□□□□□ -1.58
PTPN22-211ENST00000538253 ABCA6Q8N139 1617 aa5.15□□□□□ -1.58
PTPN22-211ENST00000538253 PTPRMP28827 1452 aa5.15□□□□□ -1.58
PTPN22-211ENST00000538253 ANKLE2Q86XL3 938 aa5.15□□□□□ -1.59
PTPN22-211ENST00000538253 SP7Q8TDD2 431 aaPredicted RBP5.15□□□□□ -1.59
PTPN22-211ENST00000538253 PPP1R15AO75807 674 aaPredicted RBP5.14□□□□□ -1.59
PTPN22-211ENST00000538253 PLSCR2Q9NRY7 297 aa5.14□□□□□ -1.59
PTPN22-211ENST00000538253 A2ML1A8K2U0 1454 aa5.14□□□□□ -1.59
PTPN22-211ENST00000538253 NAIPQ13075 1403 aa5.14□□□□□ -1.59
PTPN22-211ENST00000538253 ADAMTSL3P82987 1691 aa5.14□□□□□ -1.59
PTPN22-211ENST00000538253 ARXQ96QS3 562 aa5.14□□□□□ -1.59
PTPN22-211ENST00000538253 SETD1BQ9UPS6 1966 aaKnown RBP5.13□□□□□ -1.59
PTPN22-211ENST00000538253 PLA2R1Q13018 1463 aa5.13□□□□□ -1.59
PTPN22-211ENST00000538253 VGFO15240 615 aaPredicted RBP5.13□□□□□ -1.59
PTPN22-211ENST00000538253 PODXL2Q9NZ53 605 aa5.13□□□□□ -1.59
PTPN22-211ENST00000538253 ABCC3O15438 1527 aa5.13□□□□□ -1.59
PTPN22-211ENST00000538253 UNC13BO14795 1591 aa5.13□□□□□ -1.59
PTPN22-211ENST00000538253 ANKRD30BQ9BXX2 1392 aa5.13□□□□□ -1.59
PTPN22-211ENST00000538253 GCC2Q8IWJ2 1684 aa5.13□□□□□ -1.59
PTPN22-211ENST00000538253 CCDC144AA2RUR9 1427 aa5.12□□□□□ -1.59
PTPN22-211ENST00000538253 TET3O43151 1660 aa5.12□□□□□ -1.59
PTPN22-211ENST00000538253 PTPRKQ15262 1439 aa5.12□□□□□ -1.59
PTPN22-211ENST00000538253 FER1L4A9Z1Z3 1794 aa5.12□□□□□ -1.59
PTPN22-211ENST00000538253 PTPRTO14522 1441 aa5.12□□□□□ -1.59
PTPN22-211ENST00000538253 ERVK-7P63135 1459 aa5.12□□□□□ -1.59
PTPN22-211ENST00000538253 DEPDC5O75140 1603 aa5.11□□□□□ -1.59
PTPN22-211ENST00000538253 EFCAB6Q5THR3 1501 aa5.11□□□□□ -1.59
PTPN22-211ENST00000538253 MPHOSPH9Q99550 1183 aa5.11□□□□□ -1.59
PTPN22-211ENST00000538253 IQGAP3Q86VI3 1631 aa5.11□□□□□ -1.59
PTPN22-211ENST00000538253 PIK3R4Q99570 1358 aa5.11□□□□□ -1.59
PTPN22-211ENST00000538253 VWDEQ8N2E2 1590 aa5.11□□□□□ -1.59
PTPN22-211ENST00000538253 SPATA31D1Q6ZQQ2 1576 aa5.1□□□□□ -1.59
PTPN22-211ENST00000538253 ZEB1P37275 1124 aaPredicted RBP5.1□□□□□ -1.59
PTPN22-211ENST00000538253 BCANQ96GW7 911 aa5.1□□□□□ -1.59
PTPN22-211ENST00000538253 NOS1P29475 1434 aa5.1□□□□□ -1.59
PTPN22-211ENST00000538253 MADDQ8WXG6 1647 aa5.1□□□□□ -1.59
PTPN22-211ENST00000538253 CHGAP10645 457 aaKnown RBP5.1□□□□□ -1.59
PTPN22-211ENST00000538253 ZNF326Q5BKZ1 582 aaKnown RBP5.1□□□□□ -1.59
PTPN22-211ENST00000538253 PPARGC1BQ86YN6 1023 aaKnown RBP5.1□□□□□ -1.59
PTPN22-211ENST00000538253 RAB3GAP2Q9H2M9 1393 aa5.1□□□□□ -1.59
PTPN22-211ENST00000538253 NEURL4Q96JN8 1562 aa5.1□□□□□ -1.59
PTPN22-211ENST00000538253 RIMS1Q86UR5 1692 aaKnown RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms