RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.83■□□□□ 0.124e-10■■■■■ 32
SLC28A1-204ENST00000538177 PRKRIP1Q9H875 184 aaPredicted RBP15.83■□□□□ 0.12
SLC28A1-204ENST00000538177 DCAF11Q8TEB1 546 aa15.82■□□□□ 0.12
SLC28A1-204ENST00000538177 ATP10AO60312 1499 aa15.81■□□□□ 0.12
SLC28A1-204ENST00000538177 BCORL1Q5H9F3 1711 aa15.81■□□□□ 0.12
SLC28A1-204ENST00000538177 CARD11Q9BXL7 1154 aa15.8■□□□□ 0.12
SLC28A1-204ENST00000538177 KDM2AQ9Y2K7 1162 aa15.8■□□□□ 0.12
SLC28A1-204ENST00000538177 SPAG9O60271 1321 aaKnown RBP15.8■□□□□ 0.12
SLC28A1-204ENST00000538177 ABCA9Q8IUA7 1624 aa15.79■□□□□ 0.12
SLC28A1-204ENST00000538177 AFAP1Q8N556 730 aa15.77■□□□□ 0.12
SLC28A1-204ENST00000538177 PRAG1Q86YV5 1406 aa15.77■□□□□ 0.12
SLC28A1-204ENST00000538177 ZFYVE16Q7Z3T8 1539 aa15.77■□□□□ 0.11
SLC28A1-204ENST00000538177 FANCAO15360 1455 aa15.76■□□□□ 0.11
SLC28A1-204ENST00000538177 DHX29Q7Z478 1369 aaKnown RBP15.76■□□□□ 0.11
SLC28A1-204ENST00000538177 OSCARQ8IYS5 282 aa15.76■□□□□ 0.11
SLC28A1-204ENST00000538177 ROCK2O75116 1388 aaKnown RBP15.75■□□□□ 0.11
SLC28A1-204ENST00000538177 ASXL2Q76L83 1435 aa15.75■□□□□ 0.11
SLC28A1-204ENST00000538177 CCDC184Q52MB2 194 aa15.75■□□□□ 0.11
SLC28A1-204ENST00000538177 A2MP01023 1474 aa15.74■□□□□ 0.11
SLC28A1-204ENST00000538177 GPRASP1Q5JY77 1395 aa15.73■□□□□ 0.11
SLC28A1-204ENST00000538177 ST20-MTHFSA0A0A6YYL1 179 aa15.73■□□□□ 0.11
SLC28A1-204ENST00000538177 HNRNPUQ00839 825 aaKnown RBP eCLIP15.73■□□□□ 0.11
SLC28A1-204ENST00000538177 RGL3Q3MIN7 710 aa15.73■□□□□ 0.11
SLC28A1-204ENST00000538177 TRPM1Q7Z4N2 1603 aa15.73■□□□□ 0.11
SLC28A1-204ENST00000538177 INO80Q9ULG1 1556 aaPredicted RBP15.71■□□□□ 0.11
SLC28A1-204ENST00000538177 ATP7AQ04656 1500 aa15.71■□□□□ 0.11
SLC28A1-204ENST00000538177 MRS2Q9HD23 443 aa15.7■□□□□ 0.1
SLC28A1-204ENST00000538177 SCAPERQ9BY12 1400 aa15.7■□□□□ 0.1
SLC28A1-204ENST00000538177 ADGRL1O94910 1474 aa15.7■□□□□ 0.1
SLC28A1-204ENST00000538177 DEPDC5O75140 1603 aa15.7■□□□□ 0.1
SLC28A1-204ENST00000538177 LAMC1P11047 1609 aa15.68■□□□□ 0.1
SLC28A1-204ENST00000538177 POLR3GLQ9BT43 218 aa15.68■□□□□ 0.1
SLC28A1-204ENST00000538177 PTPRTO14522 1441 aa15.68■□□□□ 0.1
SLC28A1-204ENST00000538177 NPM1P06748 294 aaKnown RBP eCLIP15.68■□□□□ 0.1
SLC28A1-204ENST00000538177 NBPF1Q3BBV0 1214 aa15.68■□□□□ 0.1
SLC28A1-204ENST00000538177 E9PCH4 1651 aa15.67■□□□□ 0.1
SLC28A1-204ENST00000538177 EIF2AK4Q9P2K8 1649 aaKnown RBP15.67■□□□□ 0.1
SLC28A1-204ENST00000538177 VWDEQ8N2E2 1590 aa15.66■□□□□ 0.1
SLC28A1-204ENST00000538177 FKBP8Q14318 412 aa15.66■□□□□ 0.1
SLC28A1-204ENST00000538177 TRPM2O94759 1503 aa15.65■□□□□ 0.1
SLC28A1-204ENST00000538177 PRDM15P57071 1507 aaPredicted RBP15.64■□□□□ 0.09
SLC28A1-204ENST00000538177 KANK1Q14678 1352 aa15.64■□□□□ 0.09
SLC28A1-204ENST00000538177 NEFLP07196 543 aa15.64■□□□□ 0.09
SLC28A1-204ENST00000538177 FAM9BQ8IZU0 186 aa15.64■□□□□ 0.09
SLC28A1-204ENST00000538177 TET3O43151 1660 aa15.64■□□□□ 0.09
SLC28A1-204ENST00000538177 STAC3Q96MF2 364 aa15.63■□□□□ 0.09
SLC28A1-204ENST00000538177 KIF3BO15066 747 aa15.62■□□□□ 0.09
SLC28A1-204ENST00000538177 KTN1Q86UP2 1357 aaKnown RBP15.61■□□□□ 0.09
SLC28A1-204ENST00000538177 SPHKAPQ2M3C7 1700 aa15.61■□□□□ 0.09
SLC28A1-204ENST00000538177 ZBED9Q6R2W3 1325 aa15.61■□□□□ 0.09
SLC28A1-204ENST00000538177 ZNF518AQ6AHZ1 1483 aa15.61■□□□□ 0.09
SLC28A1-204ENST00000538177 TESK2Q96S53 571 aa15.6■□□□□ 0.09
SLC28A1-204ENST00000538177 MYT1LQ9UL68 1186 aa15.6■□□□□ 0.09
SLC28A1-204ENST00000538177 CD109Q6YHK3 1445 aa15.6■□□□□ 0.09
SLC28A1-204ENST00000538177 MROH1Q8NDA8 1641 aa15.6■□□□□ 0.09
SLC28A1-204ENST00000538177 KIDINS220Q9ULH0 1771 aa15.6■□□□□ 0.09
SLC28A1-204ENST00000538177 COL17A1Q9UMD9 1497 aaPredicted RBP15.59■□□□□ 0.09
SLC28A1-204ENST00000538177 CEP152O94986 1710 aa15.59■□□□□ 0.09
SLC28A1-204ENST00000538177 CLTCL1P53675 1640 aa15.58■□□□□ 0.09
SLC28A1-204ENST00000538177 RNF17Q9BXT8 1623 aaKnown RBP15.58■□□□□ 0.09
SLC28A1-204ENST00000538177 RALBP1Q15311 655 aa15.58■□□□□ 0.08
SLC28A1-204ENST00000538177 NEURL4Q96JN8 1562 aa15.57■□□□□ 0.08
SLC28A1-204ENST00000538177 CFAP74Q9C0B2 1584 aa15.57■□□□□ 0.08
SLC28A1-204ENST00000538177 MADDQ8WXG6 1647 aa15.57■□□□□ 0.08
SLC28A1-204ENST00000538177 POGZQ7Z3K3 1410 aa15.56■□□□□ 0.08
SLC28A1-204ENST00000538177 BCANQ96GW7 911 aa15.55■□□□□ 0.08
SLC28A1-204ENST00000538177 MLH3Q9UHC1 1453 aa15.55■□□□□ 0.08
SLC28A1-204ENST00000538177 LMTK2Q8IWU2 1503 aa15.55■□□□□ 0.08
SLC28A1-204ENST00000538177 PNISRQ8TF01 805 aaKnown RBP15.55■□□□□ 0.08
SLC28A1-204ENST00000538177 DISP3Q9P2K9 1392 aa15.55■□□□□ 0.08
SLC28A1-204ENST00000538177 MYBBP1AQ9BQG0 1328 aaKnown RBP15.54■□□□□ 0.08
SLC28A1-204ENST00000538177 PER1O15534 1290 aaPredicted RBP15.54■□□□□ 0.08
SLC28A1-204ENST00000538177 BRD4O60885 1362 aaPredicted RBP15.54■□□□□ 0.08
SLC28A1-204ENST00000538177 TMF1P82094 1093 aa15.53■□□□□ 0.08
SLC28A1-204ENST00000538177 CNGB1Q14028 1251 aaPredicted RBP15.53■□□□□ 0.08
SLC28A1-204ENST00000538177 EFCAB6Q5THR3 1501 aa15.53■□□□□ 0.08
SLC28A1-204ENST00000538177 WASHC2CQ9Y4E1 1318 aa15.52■□□□□ 0.08
SLC28A1-204ENST00000538177 TMC1Q8TDI8 760 aa15.52■□□□□ 0.08
SLC28A1-204ENST00000538177 PARD3Q8TEW0 1356 aa15.51■□□□□ 0.07
SLC28A1-204ENST00000538177 NEO1Q92859 1461 aa15.51■□□□□ 0.07
SLC28A1-204ENST00000538177 IQGAP1P46940 1657 aa15.5■□□□□ 0.07
SLC28A1-204ENST00000538177 SCAF11Q99590 1463 aaKnown RBP15.5■□□□□ 0.07
SLC28A1-204ENST00000538177 LRPPRCP42704 1394 aaKnown RBP15.49■□□□□ 0.07
SLC28A1-204ENST00000538177 FRMPD1Q5SYB0 1578 aa15.49■□□□□ 0.07
SLC28A1-204ENST00000538177 PPRC1Q5VV67 1664 aaKnown RBP15.49■□□□□ 0.07
SLC28A1-204ENST00000538177 HECW2Q9P2P5 1572 aa15.48■□□□□ 0.07
SLC28A1-204ENST00000538177 ERICH6BQ5W0A0 696 aa15.48■□□□□ 0.07
SLC28A1-204ENST00000538177 KIAA1210Q9ULL0 1709 aa15.48■□□□□ 0.07
SLC28A1-204ENST00000538177 MYOM2P54296 1465 aa15.48■□□□□ 0.07
SLC28A1-204ENST00000538177 NLRP13Q86W25 1043 aa15.47■□□□□ 0.07
SLC28A1-204ENST00000538177 PANK3Q9H999 370 aa15.46■□□□□ 0.07
SLC28A1-204ENST00000538177 UGGT1Q9NYU2 1555 aa15.46■□□□□ 0.07
SLC28A1-204ENST00000538177 SMG6Q86US8 1419 aaKnown RBP15.46■□□□□ 0.06
SLC28A1-204ENST00000538177 TSHZ2Q9NRE2 1034 aa15.45■□□□□ 0.06
SLC28A1-204ENST00000538177 KIF1BO60333 1816 aa15.45■□□□□ 0.06
SLC28A1-204ENST00000538177 MAP3K4Q9Y6R4 1608 aa15.45■□□□□ 0.06
SLC28A1-204ENST00000538177 CDCA8Q53HL2 280 aa15.44■□□□□ 0.06
SLC28A1-204ENST00000538177 ABCA6Q8N139 1617 aa15.44■□□□□ 0.06
SLC28A1-204ENST00000538177 NPATQ14207 1427 aa15.43■□□□□ 0.06
SLC28A1-204ENST00000538177 NRXN1Q9ULB1 1477 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms