RNA–Protein interactions for RNA: ENST00000534557.1

VPS51-215, Transcript of VPS51, GARP complex subunit, humanhuman

APPRIS ALT2 TSL 3

Gene VPS51, Length 854 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-215ENST00000534557 NCKAP5LQ9HCH0 1330 aa28.57■■■□□ 2.16
VPS51-215ENST00000534557 FAM135AQ9P2D6 1515 aa28.57■■■□□ 2.16
VPS51-215ENST00000534557 KDM5DQ9BY66 1539 aa28.54■■■□□ 2.16
VPS51-215ENST00000534557 TNRQ92752 1358 aa28.53■■■□□ 2.16
VPS51-215ENST00000534557 FBXO31Q5XUX0 539 aaPredicted RBP28.53■■■□□ 2.16
VPS51-215ENST00000534557 PLA2R1Q13018 1463 aa28.51■■■□□ 2.15
VPS51-215ENST00000534557 MAST1Q9Y2H9 1570 aa28.5■■■□□ 2.15
VPS51-215ENST00000534557 CEP170BQ9Y4F5 1589 aaPredicted RBP28.5■■■□□ 2.15
VPS51-215ENST00000534557 A2ML1A8K2U0 1454 aa28.49■■■□□ 2.15
VPS51-215ENST00000534557 PZPP20742 1482 aa28.49■■■□□ 2.15
VPS51-215ENST00000534557 MYO3AQ8NEV4 1616 aa28.49■■■□□ 2.15
VPS51-215ENST00000534557 THEMISQ8N1K5 641 aaPredicted RBP28.48■■■□□ 2.15
VPS51-215ENST00000534557 ZNF142P52746 1687 aaPredicted RBP28.45■■■□□ 2.15
VPS51-215ENST00000534557 RRP7BPQ9NSQ0 103 aa28.44■■■□□ 2.14
VPS51-215ENST00000534557 ANKLE2Q86XL3 938 aa28.42■■■□□ 2.14
VPS51-215ENST00000534557 DUOX2Q9NRD8 1548 aa28.42■■■□□ 2.14
VPS51-215ENST00000534557 KIF15Q9NS87 1388 aa28.41■■■□□ 2.14
VPS51-215ENST00000534557 TCOF1Q13428 1488 aaKnown RBP28.4■■■□□ 2.14
VPS51-215ENST00000534557 ABCC5O15440 1437 aa28.39■■■□□ 2.14
VPS51-215ENST00000534557 FGD6Q6ZV73 1430 aa28.39■■■□□ 2.14
VPS51-215ENST00000534557 PTPN23Q9H3S7 1636 aa28.39■■■□□ 2.13
VPS51-215ENST00000534557 NLRP1Q9C000 1473 aa28.39■■■□□ 2.13
VPS51-215ENST00000534557 SHANK2Q9UPX8 1470 aa28.38■■■□□ 2.13
VPS51-215ENST00000534557 EIF2AK4Q9P2K8 1649 aaKnown RBP28.37■■■□□ 2.13
VPS51-215ENST00000534557 DNMT1P26358 1616 aaKnown RBP28.36■■■□□ 2.13
VPS51-215ENST00000534557 ZNF335Q9H4Z2 1342 aaPredicted RBP28.36■■■□□ 2.13
VPS51-215ENST00000534557 RNF17Q9BXT8 1623 aaKnown RBP28.36■■■□□ 2.13
VPS51-215ENST00000534557 ANKRD30AQ9BXX3 1397 aa28.36■■■□□ 2.13
VPS51-215ENST00000534557 IQSEC2Q5JU85 1478 aa28.35■■■□□ 2.13
VPS51-215ENST00000534557 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.35■■■□□ 2.134e-6■□□□□ 8.4
VPS51-215ENST00000534557 CHIC2Q9UKJ5 165 aa28.35■■■□□ 2.13
VPS51-215ENST00000534557 DAPK1P53355 1430 aa28.35■■■□□ 2.13
VPS51-215ENST00000534557 LTBP4Q8N2S1 1624 aa28.34■■■□□ 2.13
VPS51-215ENST00000534557 KANK1Q14678 1352 aa28.34■■■□□ 2.13
VPS51-215ENST00000534557 ERBINQ96RT1 1412 aa28.34■■■□□ 2.13
VPS51-215ENST00000534557 ABCC3O15438 1527 aa28.33■■■□□ 2.13
VPS51-215ENST00000534557 FAM50AQ14320 339 aaKnown RBP28.33■■■□□ 2.13
VPS51-215ENST00000534557 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.32■■■□□ 2.12
VPS51-215ENST00000534557 ZC3H13Q5T200 1668 aaKnown RBP28.32■■■□□ 2.12
VPS51-215ENST00000534557 UGGT1Q9NYU2 1555 aa28.3■■■□□ 2.12
VPS51-215ENST00000534557 UBAP1LF5GYI3 381 aa28.25■■■□□ 2.11
VPS51-215ENST00000534557 ERVK-7P63135 1459 aa28.24■■■□□ 2.11
VPS51-215ENST00000534557 CROCC2H7BZ55 1655 aa28.23■■■□□ 2.11
VPS51-215ENST00000534557 SPATA31D1Q6ZQQ2 1576 aa28.22■■■□□ 2.11
VPS51-215ENST00000534557 ARHGAP31Q2M1Z3 1444 aa28.21■■■□□ 2.11
VPS51-215ENST00000534557 STAG3Q9UJ98 1225 aa28.21■■■□□ 2.11
VPS51-215ENST00000534557 MROH1Q8NDA8 1641 aa28.19■■■□□ 2.1
VPS51-215ENST00000534557 NPHP4O75161 1426 aaPredicted RBP28.18■■■□□ 2.1
VPS51-215ENST00000534557 PRDM15P57071 1507 aaPredicted RBP28.18■■■□□ 2.1
VPS51-215ENST00000534557 EID1Q9Y6B2 187 aa28.17■■■□□ 2.1
VPS51-215ENST00000534557 POLR1AO95602 1720 aaPredicted RBP28.16■■■□□ 2.1
VPS51-215ENST00000534557 CEP152O94986 1710 aa28.15■■■□□ 2.1
VPS51-215ENST00000534557 MED14O60244 1454 aa28.15■■■□□ 2.1
VPS51-215ENST00000534557 TOM1O60784 492 aa28.14■■■□□ 2.1
VPS51-215ENST00000534557 CPS1P31327 1500 aa28.13■■■□□ 2.09
VPS51-215ENST00000534557 TXNDC2Q86VQ3 553 aa28.13■■■□□ 2.09
VPS51-215ENST00000534557 DEPDC5O75140 1603 aa28.12■■■□□ 2.09
VPS51-215ENST00000534557 CFAP65Q6ZU64 1925 aaKnown RBP28.12■■■□□ 2.09
VPS51-215ENST00000534557 NEURL4Q96JN8 1562 aa28.11■■■□□ 2.09
VPS51-215ENST00000534557 ADGRL2O95490 1459 aa28.1■■■□□ 2.09
VPS51-215ENST00000534557 ANKRD50Q9ULJ7 1429 aa28.09■■■□□ 2.09
VPS51-215ENST00000534557 SCAF1Q9H7N4 1312 aaKnown RBP28.08■■■□□ 2.09
VPS51-215ENST00000534557 IDI1Q13907 227 aa28.05■■■□□ 2.08
VPS51-215ENST00000534557 LMTK2Q8IWU2 1503 aa28.05■■■□□ 2.08
VPS51-215ENST00000534557 SLC52A1Q9NWF4 448 aa28.05■■■□□ 2.08
VPS51-215ENST00000534557 DISP3Q9P2K9 1392 aa28.05■■■□□ 2.08
VPS51-215ENST00000534557 SCAF11Q99590 1463 aaKnown RBP28.04■■■□□ 2.08
VPS51-215ENST00000534557 PIP4K2BP78356 416 aa28.03■■■□□ 2.08
VPS51-215ENST00000534557 LTKP29376 864 aa28.02■■■□□ 2.08
VPS51-215ENST00000534557 IQGAP1P46940 1657 aa28.02■■■□□ 2.08
VPS51-215ENST00000534557 UBR1Q8IWV7 1749 aa28.01■■■□□ 2.07
VPS51-215ENST00000534557 TMEM2Q9UHN6 1383 aa27.99■■■□□ 2.07
VPS51-215ENST00000534557 VWDEQ8N2E2 1590 aa27.99■■■□□ 2.07
VPS51-215ENST00000534557 ITGAEP38570 1179 aa27.98■■■□□ 2.07
VPS51-215ENST00000534557 HDGFP51858 240 aaKnown RBP27.98■■■□□ 2.07
VPS51-215ENST00000534557 SLIT1O75093 1534 aa27.97■■■□□ 2.07
VPS51-215ENST00000534557 ARHGAP23Q9P227 1491 aa27.97■■■□□ 2.07
VPS51-215ENST00000534557 ROCK1Q13464 1354 aa27.97■■■□□ 2.07
VPS51-215ENST00000534557 PPARGC1BQ86YN6 1023 aaKnown RBP27.96■■■□□ 2.07
VPS51-215ENST00000534557 BCANQ96GW7 911 aa27.94■■■□□ 2.06
VPS51-215ENST00000534557 RPRD2Q5VT52 1461 aaKnown RBP27.94■■■□□ 2.06
VPS51-215ENST00000534557 NOS1P29475 1434 aa27.93■■■□□ 2.06
VPS51-215ENST00000534557 EFCAB6Q5THR3 1501 aa27.93■■■□□ 2.06
VPS51-215ENST00000534557 PIK3C2BO00750 1634 aa27.91■■■□□ 2.06
VPS51-215ENST00000534557 KDM5AP29375 1690 aaKnown RBP27.87■■■□□ 2.05
VPS51-215ENST00000534557 PPP1R15AO75807 674 aaPredicted RBP27.86■■■□□ 2.05
VPS51-215ENST00000534557 HSPA1LP34931 641 aa27.86■■■□□ 2.05
VPS51-215ENST00000534557 LRRC7Q96NW7 1537 aa27.86■■■□□ 2.05
VPS51-215ENST00000534557 CHGAP10645 457 aaKnown RBP27.85■■■□□ 2.05
VPS51-215ENST00000534557 NUP155O75694 1391 aa27.85■■■□□ 2.05
VPS51-215ENST00000534557 SYNMO15061 1565 aa27.84■■■□□ 2.05
VPS51-215ENST00000534557 SLC26A8Q96RN1 970 aa27.83■■■□□ 2.05
VPS51-215ENST00000534557 KCNA6P17658 529 aa27.82■■■□□ 2.04
VPS51-215ENST00000534557 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.82■■■□□ 2.04
VPS51-215ENST00000534557 ADGRB3O60242 1522 aa27.81■■■□□ 2.04
VPS51-215ENST00000534557 TET3O43151 1660 aa27.81■■■□□ 2.04
VPS51-215ENST00000534557 PROSER2Q86WR7 435 aaPredicted RBP27.78■■■□□ 2.04
VPS51-215ENST00000534557 UNC13BO14795 1591 aa27.77■■■□□ 2.04
VPS51-215ENST00000534557 ILDR2Q71H61 639 aa27.74■■■□□ 2.03
VPS51-215ENST00000534557 STRCP1A6NGW2 1772 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms