RNA–Protein interactions for RNA: ENST00000534557.1

VPS51-215, Transcript of VPS51, GARP complex subunit, humanhuman

APPRIS ALT2 TSL 3

Gene VPS51, Length 854 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-215ENST00000534557 NISCHQ9Y2I1 1504 aa45.12■■■■■ 4.81
VPS51-215ENST00000534557 CCDC180Q9P1Z9 1646 aa40.32■■■■■ 4.05
VPS51-215ENST00000534557 ABCC9O60706 1549 aa40.21■■■■■ 4.03
VPS51-215ENST00000534557 RB1CC1Q8TDY2 1594 aa38.39■■■■□ 3.74
VPS51-215ENST00000534557 DCAF8L2P0C7V8 631 aa38.28■■■■□ 3.72
VPS51-215ENST00000534557 NACADO15069 1562 aa38.19■■■■□ 3.7
VPS51-215ENST00000534557 MYO15BQ96JP2 1530 aa37.71■■■■□ 3.63
VPS51-215ENST00000534557 PABPN1Q86U42 306 aaKnown RBP eCLIP37.56■■■■□ 3.6
VPS51-215ENST00000534557 DNAJC5BQ9UF47 199 aa37.49■■■■□ 3.59
VPS51-215ENST00000534557 ZCCHC6Q5VYS8 1495 aaKnown RBP37.39■■■■□ 3.58
VPS51-215ENST00000534557 DCAF1Q9Y4B6 1507 aa37.3■■■■□ 3.56
VPS51-215ENST00000534557 UNC13AQ9UPW8 1703 aa37.26■■■■□ 3.56
VPS51-215ENST00000534557 BICRAQ9NZM4 1560 aa37.09■■■■□ 3.53
VPS51-215ENST00000534557 SHROOM4Q9ULL8 1493 aa36.8■■■■□ 3.48
VPS51-215ENST00000534557 SCRIBQ14160 1630 aa36.77■■■■□ 3.48
VPS51-215ENST00000534557 CC2D2AQ9P2K1 1620 aa36.26■■■■□ 3.4
VPS51-215ENST00000534557 EIF4G1Q04637 1599 aaKnown RBP36.26■■■■□ 3.39
VPS51-215ENST00000534557 CECR2Q9BXF3 1484 aa36.24■■■■□ 3.39
VPS51-215ENST00000534557 NCAPD3P42695 1498 aa35.26■■■■□ 3.23
VPS51-215ENST00000534557 ATAD2BQ9ULI0 1458 aa35.15■■■■□ 3.22
VPS51-215ENST00000534557 SMARCA2P51531 1590 aa35.11■■■■□ 3.21
VPS51-215ENST00000534557 SMARCA4P51532 1647 aa35.1■■■■□ 3.21
VPS51-215ENST00000534557 BAZ1AQ9NRL2 1556 aaPredicted RBP35.04■■■■□ 3.2
VPS51-215ENST00000534557 HMGXB3Q12766 1538 aa34.95■■■■□ 3.19
VPS51-215ENST00000534557 BAZ1BQ9UIG0 1483 aaKnown RBP34.87■■■■□ 3.17
VPS51-215ENST00000534557 ERCC6Q03468 1493 aa34.82■■■■□ 3.16
VPS51-215ENST00000534557 PEG3Q9GZU2 1588 aa34.75■■■■□ 3.15
VPS51-215ENST00000534557 MROH2BQ7Z745 1585 aa34.72■■■■□ 3.15
VPS51-215ENST00000534557 CUX2O14529 1486 aa34.61■■■■□ 3.13
VPS51-215ENST00000534557 NESP48681 1621 aa34.53■■■■□ 3.12
VPS51-215ENST00000534557 DNAJC5Q9H3Z4 198 aa34.42■■■■□ 3.1
VPS51-215ENST00000534557 LAMC3Q9Y6N6 1575 aa34.4■■■■□ 3.1
VPS51-215ENST00000534557 PDS5BQ9NTI5 1447 aa34.33■■■■□ 3.09
VPS51-215ENST00000534557 WIZO95785 1651 aa34.28■■■■□ 3.08
VPS51-215ENST00000534557 CADPSQ9ULU8 1353 aa34.25■■■■□ 3.07
VPS51-215ENST00000534557 RSF1Q96T23 1441 aaPredicted RBP34.15■■■■□ 3.06
VPS51-215ENST00000534557 THOC2Q8NI27 1593 aaKnown RBP34.06■■■■□ 3.04
VPS51-215ENST00000534557 KIF21AQ7Z4S6 1674 aa34.02■■■■□ 3.04
VPS51-215ENST00000534557 TOP2AP11388 1531 aaKnown RBP33.93■■■■□ 3.02
VPS51-215ENST00000534557 MRC2Q9UBG0 1479 aa33.9■■■■□ 3.02
VPS51-215ENST00000534557 CFTRP13569 1480 aa33.84■■■■□ 3.01
VPS51-215ENST00000534557 CEP164Q9UPV0 1460 aa33.84■■■■□ 3.01
VPS51-215ENST00000534557 FANCD2Q9BXW9 1451 aa33.81■■■■□ 3
VPS51-215ENST00000534557 WDR62O43379 1518 aa33.74■■■□□ 2.99
VPS51-215ENST00000534557 CCDC88BA6NC98 1476 aa33.58■■■□□ 2.97
VPS51-215ENST00000534557 URB2Q14146 1524 aaKnown RBP33.43■■■□□ 2.94
VPS51-215ENST00000534557 PRDM2Q13029 1718 aa33.34■■■□□ 2.93
VPS51-215ENST00000534557 OSCARQ8IYS5 282 aa33.24■■■□□ 2.91
VPS51-215ENST00000534557 ABCC8Q09428 1581 aa33.24■■■□□ 2.91
VPS51-215ENST00000534557 IFT140Q96RY7 1462 aa33.18■■■□□ 2.9
VPS51-215ENST00000534557 TOPBP1Q92547 1522 aa33.15■■■□□ 2.9
VPS51-215ENST00000534557 TRIM41Q8WV44 630 aa33.05■■■□□ 2.88
VPS51-215ENST00000534557 DNMBPQ6XZF7 1577 aa33.04■■■□□ 2.88
VPS51-215ENST00000534557 ZNF608Q9ULD9 1512 aaPredicted RBP32.98■■■□□ 2.87
VPS51-215ENST00000534557 SUPT5HO00267 1087 aaKnown RBP32.98■■■□□ 2.87
VPS51-215ENST00000534557 POLA1P09884 1462 aaPredicted RBP32.82■■■□□ 2.84
VPS51-215ENST00000534557 SOGA1O94964 1423 aa32.8■■■□□ 2.84
VPS51-215ENST00000534557 AQRO60306 1485 aaKnown RBP eCLIP32.79■■■□□ 2.843e-7■■■■□ 21.2
VPS51-215ENST00000534557 EIF4G3O43432 1585 aaKnown RBP32.78■■■□□ 2.84
VPS51-215ENST00000534557 TARBP1Q13395 1621 aaKnown RBP32.76■■■□□ 2.83
VPS51-215ENST00000534557 FBLN2P98095 1184 aa32.73■■■□□ 2.83
VPS51-215ENST00000534557 RAD54L2Q9Y4B4 1467 aa32.7■■■□□ 2.83
VPS51-215ENST00000534557 TDRD9Q8NDG6 1382 aaKnown RBP32.68■■■□□ 2.82
VPS51-215ENST00000534557 FGD5Q6ZNL6 1462 aa32.66■■■□□ 2.82
VPS51-215ENST00000534557 CUX1P39880 1505 aa32.61■■■□□ 2.81
VPS51-215ENST00000534557 WDR97A6NE52 1622 aa32.54■■■□□ 2.8
VPS51-215ENST00000534557 CHMP7Q8WUX9 453 aaPredicted RBP32.53■■■□□ 2.8
VPS51-215ENST00000534557 RIMBP3CA6NJZ7 1639 aa32.5■■■□□ 2.79
VPS51-215ENST00000534557 RIMBP3BA6NNM3 1639 aa32.5■■■□□ 2.79
VPS51-215ENST00000534557 RIMBP3Q9UFD9 1639 aa32.5■■■□□ 2.79
VPS51-215ENST00000534557 ARHGEF11O15085 1522 aa32.47■■■□□ 2.79
VPS51-215ENST00000534557 CHD1O14646 1710 aa32.46■■■□□ 2.79
VPS51-215ENST00000534557 GRIN2BQ13224 1484 aa32.45■■■□□ 2.79
VPS51-215ENST00000534557 SNAPC4Q5SXM2 1469 aa32.43■■■□□ 2.78
VPS51-215ENST00000534557 MAGI1Q96QZ7 1491 aaPredicted RBP32.42■■■□□ 2.78
VPS51-215ENST00000534557 CYB5RLQ6IPT4 315 aa32.41■■■□□ 2.78
VPS51-215ENST00000534557 GAPVD1Q14C86 1478 aa32.36■■■□□ 2.77
VPS51-215ENST00000534557 WRNQ14191 1432 aaPredicted RBP eCLIP32.34■■■□□ 2.77
VPS51-215ENST00000534557 ABCA10Q8WWZ4 1543 aa32.31■■■□□ 2.76
VPS51-215ENST00000534557 SYNJ2O15056 1496 aa32.3■■■□□ 2.76
VPS51-215ENST00000534557 SYNJ1O43426 1573 aa32.26■■■□□ 2.75
VPS51-215ENST00000534557 TOP2BQ02880 1626 aa32.17■■■□□ 2.74
VPS51-215ENST00000534557 PBRM1Q86U86 1689 aa32.15■■■□□ 2.74
VPS51-215ENST00000534557 ARAP1Q96P48 1450 aa32.14■■■□□ 2.74
VPS51-215ENST00000534557 ABCA5Q8WWZ7 1642 aa32.14■■■□□ 2.74
VPS51-215ENST00000534557 CLASP1Q7Z460 1538 aa32.13■■■□□ 2.73
VPS51-215ENST00000534557 BIVM-ERCC5R4GMW8 1640 aa32.11■■■□□ 2.73
VPS51-215ENST00000534557 TRHP20396 242 aaPredicted RBP32.06■■■□□ 2.72
VPS51-215ENST00000534557 GRIN2AQ12879 1464 aa31.98■■■□□ 2.71
VPS51-215ENST00000534557 FHAD1B1AJZ9 1412 aa31.98■■■□□ 2.71
VPS51-215ENST00000534557 ERICH3Q5RHP9 1530 aa31.93■■■□□ 2.7
VPS51-215ENST00000534557 ADAMTS12P58397 1594 aa31.9■■■□□ 2.7
VPS51-215ENST00000534557 NUP160Q12769 1436 aa31.85■■■□□ 2.69
VPS51-215ENST00000534557 CEP170Q5SW79 1584 aa31.76■■■□□ 2.67
VPS51-215ENST00000534557 KIF27Q86VH2 1401 aa31.71■■■□□ 2.67
VPS51-215ENST00000534557 JPH4Q96JJ6 628 aa31.7■■■□□ 2.67
VPS51-215ENST00000534557 IGF1RP08069 1367 aa31.62■■■□□ 2.65
VPS51-215ENST00000534557 PRG4Q92954 1404 aaPredicted RBP31.61■■■□□ 2.65
VPS51-215ENST00000534557 ERCC6L2Q5T890 1561 aa31.6■■■□□ 2.65
VPS51-215ENST00000534557 SHROOM2Q13796 1616 aa31.59■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms