RNA–Protein interactions for RNA: ENST00000532656.6

CTSB-226, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-226ENST00000532656 RSPH4AQ5TD94 716 aa27.35■■□□□ 1.97
CTSB-226ENST00000532656 FBXO31Q5XUX0 539 aaPredicted RBP27.35■■□□□ 1.97
CTSB-226ENST00000532656 ARHGEF5Q12774 1597 aa27.34■■□□□ 1.97
CTSB-226ENST00000532656 TNRQ92752 1358 aa27.34■■□□□ 1.97
CTSB-226ENST00000532656 PZPP20742 1482 aa27.32■■□□□ 1.96
CTSB-226ENST00000532656 FAM135AQ9P2D6 1515 aa27.31■■□□□ 1.96
CTSB-226ENST00000532656 ILDR2Q71H61 639 aa27.31■■□□□ 1.96
CTSB-226ENST00000532656 WASHC2CQ9Y4E1 1318 aa27.31■■□□□ 1.96
CTSB-226ENST00000532656 VPS8Q8N3P4 1428 aa27.3■■□□□ 1.96
CTSB-226ENST00000532656 LRRC9Q6ZRR7 1453 aa27.3■■□□□ 1.96
CTSB-226ENST00000532656 SPATA31D1Q6ZQQ2 1576 aa27.3■■□□□ 1.96
CTSB-226ENST00000532656 TSPY4P0CV99 314 aa27.29■■□□□ 1.96
CTSB-226ENST00000532656 TSPY10P0CW01 314 aa27.29■■□□□ 1.96
CTSB-226ENST00000532656 POLR1AO95602 1720 aaPredicted RBP27.28■■□□□ 1.96
CTSB-226ENST00000532656 UBAP1LF5GYI3 381 aa27.28■■□□□ 1.96
CTSB-226ENST00000532656 LOC105371045A0A1W2PR82 267 aa27.27■■□□□ 1.96
CTSB-226ENST00000532656 NEURL4Q96JN8 1562 aa27.25■■□□□ 1.95
CTSB-226ENST00000532656 MIA2Q96PC5 1412 aa27.22■■□□□ 1.95
CTSB-226ENST00000532656 MAST1Q9Y2H9 1570 aa27.21■■□□□ 1.95
CTSB-226ENST00000532656 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.21■■□□□ 1.952e-6■■□□□ 11.9
CTSB-226ENST00000532656 RNF17Q9BXT8 1623 aaKnown RBP27.2■■□□□ 1.95
CTSB-226ENST00000532656 KANK4Q5T7N3 995 aaPredicted RBP27.2■■□□□ 1.94
CTSB-226ENST00000532656 NLRP1Q9C000 1473 aa27.19■■□□□ 1.94
CTSB-226ENST00000532656 UGGT1Q9NYU2 1555 aa27.18■■□□□ 1.94
CTSB-226ENST00000532656 ABCC3O15438 1527 aa27.16■■□□□ 1.94
CTSB-226ENST00000532656 ANKLE2Q86XL3 938 aa27.16■■□□□ 1.94
CTSB-226ENST00000532656 THEMISQ8N1K5 641 aaPredicted RBP27.16■■□□□ 1.94
CTSB-226ENST00000532656 MAP3K1Q13233 1512 aa27.15■■□□□ 1.94
CTSB-226ENST00000532656 MYOM3Q5VTT5 1437 aa27.15■■□□□ 1.94
CTSB-226ENST00000532656 ZC3H13Q5T200 1668 aaKnown RBP27.14■■□□□ 1.94
CTSB-226ENST00000532656 SHANK2Q9UPX8 1470 aa27.14■■□□□ 1.94
CTSB-226ENST00000532656 EIF2AK4Q9P2K8 1649 aaKnown RBP27.14■■□□□ 1.94
CTSB-226ENST00000532656 CPS1P31327 1500 aa27.13■■□□□ 1.93
CTSB-226ENST00000532656 SOCS7O14512 581 aa27.12■■□□□ 1.93
CTSB-226ENST00000532656 MROH1Q8NDA8 1641 aa27.12■■□□□ 1.93
CTSB-226ENST00000532656 NPHP4O75161 1426 aaPredicted RBP27.1■■□□□ 1.93
CTSB-226ENST00000532656 DEPDC5O75140 1603 aa27.1■■□□□ 1.93
CTSB-226ENST00000532656 SCAF1Q9H7N4 1312 aaKnown RBP27.1■■□□□ 1.93
CTSB-226ENST00000532656 CEP152O94986 1710 aa27.09■■□□□ 1.93
CTSB-226ENST00000532656 VWDEQ8N2E2 1590 aa27.09■■□□□ 1.93
CTSB-226ENST00000532656 ERVK-7P63135 1459 aa27.08■■□□□ 1.93
CTSB-226ENST00000532656 MED14O60244 1454 aa27.07■■□□□ 1.92
CTSB-226ENST00000532656 PIP4K2BP78356 416 aa27.07■■□□□ 1.92
CTSB-226ENST00000532656 DUOX2Q9NRD8 1548 aa27.06■■□□□ 1.92
CTSB-226ENST00000532656 IQGAP1P46940 1657 aa27.05■■□□□ 1.92
CTSB-226ENST00000532656 CFAP65Q6ZU64 1925 aaKnown RBP27.04■■□□□ 1.92
CTSB-226ENST00000532656 TOM1O60784 492 aa27.03■■□□□ 1.92
CTSB-226ENST00000532656 CROCC2H7BZ55 1655 aa27.01■■□□□ 1.92
CTSB-226ENST00000532656 HSPA1LP34931 641 aa27.01■■□□□ 1.91
CTSB-226ENST00000532656 KIF15Q9NS87 1388 aa27■■□□□ 1.91
CTSB-226ENST00000532656 PTPN23Q9H3S7 1636 aa26.99■■□□□ 1.91
CTSB-226ENST00000532656 ABCC5O15440 1437 aa26.99■■□□□ 1.91
CTSB-226ENST00000532656 UBR1Q8IWV7 1749 aa26.98■■□□□ 1.91
CTSB-226ENST00000532656 PRDM15P57071 1507 aaPredicted RBP26.97■■□□□ 1.91
CTSB-226ENST00000532656 RRP7BPQ9NSQ0 103 aa26.97■■□□□ 1.91
CTSB-226ENST00000532656 STRCP1A6NGW2 1772 aa26.97■■□□□ 1.91
CTSB-226ENST00000532656 ERBINQ96RT1 1412 aa26.95■■□□□ 1.9
CTSB-226ENST00000532656 APLP2Q06481 763 aa26.94■■□□□ 1.9
CTSB-226ENST00000532656 ALKQ9UM73 1620 aa26.94■■□□□ 1.9
CTSB-226ENST00000532656 DAPK1P53355 1430 aa26.92■■□□□ 1.9
CTSB-226ENST00000532656 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.92■■□□□ 1.9
CTSB-226ENST00000532656 ARHGAP31Q2M1Z3 1444 aa26.91■■□□□ 1.9
CTSB-226ENST00000532656 SCAF11Q99590 1463 aaKnown RBP26.91■■□□□ 1.9
CTSB-226ENST00000532656 MED1Q15648 1581 aaPredicted RBP26.91■■□□□ 1.9
CTSB-226ENST00000532656 LRRC7Q96NW7 1537 aa26.9■■□□□ 1.9
CTSB-226ENST00000532656 FGD6Q6ZV73 1430 aa26.9■■□□□ 1.9
CTSB-226ENST00000532656 SYNMO15061 1565 aa26.89■■□□□ 1.9
CTSB-226ENST00000532656 ARHGAP23Q9P227 1491 aa26.87■■□□□ 1.89
CTSB-226ENST00000532656 LTKP29376 864 aa26.87■■□□□ 1.89
CTSB-226ENST00000532656 SLIT1O75093 1534 aa26.86■■□□□ 1.89
CTSB-226ENST00000532656 CHIC2Q9UKJ5 165 aa26.86■■□□□ 1.89
CTSB-226ENST00000532656 TXNDC2Q86VQ3 553 aa26.85■■□□□ 1.89
CTSB-226ENST00000532656 PIK3C2BO00750 1634 aa26.85■■□□□ 1.89
CTSB-226ENST00000532656 KANK1Q14678 1352 aa26.84■■□□□ 1.89
CTSB-226ENST00000532656 SENP3Q9H4L4 574 aaPredicted RBP26.83■■□□□ 1.89
CTSB-226ENST00000532656 ANKRD30AQ9BXX3 1397 aa26.82■■□□□ 1.88
CTSB-226ENST00000532656 EID1Q9Y6B2 187 aa26.8■■□□□ 1.88
CTSB-226ENST00000532656 STAG3Q9UJ98 1225 aa26.79■■□□□ 1.88
CTSB-226ENST00000532656 LMTK2Q8IWU2 1503 aa26.77■■□□□ 1.88
CTSB-226ENST00000532656 TMEM2Q9UHN6 1383 aa26.77■■□□□ 1.88
CTSB-226ENST00000532656 EFCAB6Q5THR3 1501 aa26.75■■□□□ 1.87
CTSB-226ENST00000532656 IDI1Q13907 227 aa26.74■■□□□ 1.87
CTSB-226ENST00000532656 XIRP1Q702N8 1843 aaKnown RBP26.74■■□□□ 1.87
CTSB-226ENST00000532656 KDM5AP29375 1690 aaKnown RBP26.73■■□□□ 1.87
CTSB-226ENST00000532656 ADGRL2O95490 1459 aa26.7■■□□□ 1.87
CTSB-226ENST00000532656 PHF23Q9BUL5 403 aaPredicted RBP26.7■■□□□ 1.86
CTSB-226ENST00000532656 FAM50AQ14320 339 aaKnown RBP26.69■■□□□ 1.86
CTSB-226ENST00000532656 NOS1P29475 1434 aa26.68■■□□□ 1.86
CTSB-226ENST00000532656 ADGRB3O60242 1522 aa26.66■■□□□ 1.86
CTSB-226ENST00000532656 SLC26A8Q96RN1 970 aa26.65■■□□□ 1.86
CTSB-226ENST00000532656 TET3O43151 1660 aa26.63■■□□□ 1.85
CTSB-226ENST00000532656 TMEM94Q12767 1356 aa26.62■■□□□ 1.85
CTSB-226ENST00000532656 ANKRD50Q9ULJ7 1429 aa26.62■■□□□ 1.85
CTSB-226ENST00000532656 KCNA6P17658 529 aa26.6■■□□□ 1.85
CTSB-226ENST00000532656 RBM33Q96EV2 1170 aaKnown RBP26.59■■□□□ 1.85
CTSB-226ENST00000532656 SLC52A1Q9NWF4 448 aa26.59■■□□□ 1.85
CTSB-226ENST00000532656 RPRD2Q5VT52 1461 aaKnown RBP26.58■■□□□ 1.85
CTSB-226ENST00000532656 PROSER2Q86WR7 435 aaPredicted RBP26.57■■□□□ 1.84
CTSB-226ENST00000532656 BCANQ96GW7 911 aa26.57■■□□□ 1.84
CTSB-226ENST00000532656 MYO5BQ9ULV0 1848 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms