RNA–Protein interactions for RNA: ENST00000531312.5

DHDDS-223, Transcript of dehydrodolichyl diphosphate synthase subunit, human

TSL 4

Gene DHDDS, Length 496 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DHDDS-223	ENST00000531312	CPS1	P31327	1500 aa		12.96	□□□□□ -0.33
DHDDS-223	ENST00000531312	FAM135A	Q9P2D6	1515 aa		12.96	□□□□□ -0.33
DHDDS-223	ENST00000531312	DNMT1	P26358	1616 aa	Known RBP	12.95	□□□□□ -0.34
DHDDS-223	ENST00000531312	MBD5	Q9P267	1494 aa		12.94	□□□□□ -0.34
DHDDS-223	ENST00000531312	TNR	Q92752	1358 aa		12.94	□□□□□ -0.34
DHDDS-223	ENST00000531312	RSPH4A	Q5TD94	716 aa		12.93	□□□□□ -0.34
DHDDS-223	ENST00000531312	ANKLE2	Q86XL3	938 aa		12.93	□□□□□ -0.34
DHDDS-223	ENST00000531312	THEMIS	Q8N1K5	641 aa	Predicted RBP	12.93	□□□□□ -0.34
DHDDS-223	ENST00000531312	ZNF644	Q9H582	1327 aa	Predicted RBP	12.92	□□□□□ -0.34
DHDDS-223	ENST00000531312	PZP	P20742	1482 aa		12.92	□□□□□ -0.34
DHDDS-223	ENST00000531312	SHANK2	Q9UPX8	1470 aa		12.92	□□□□□ -0.34
DHDDS-223	ENST00000531312	RGS17	Q9UGC6	210 aa	Predicted RBP	12.92	□□□□□ -0.34
DHDDS-223	ENST00000531312	EHBP1L1	Q8N3D4	1523 aa		12.92	□□□□□ -0.34
DHDDS-223	ENST00000531312	KDM5D	Q9BY66	1539 aa		12.92	□□□□□ -0.34
DHDDS-223	ENST00000531312	WASHC2C	Q9Y4E1	1318 aa		12.91	□□□□□ -0.34
DHDDS-223	ENST00000531312	TIAM1	Q13009	1591 aa		12.91	□□□□□ -0.34
DHDDS-223	ENST00000531312	CEP162	Q5TB80	1403 aa		12.91	□□□□□ -0.34
DHDDS-223	ENST00000531312	KIF3B	O15066	747 aa		12.91	□□□□□ -0.34
DHDDS-223	ENST00000531312	SENP3	Q9H4L4	574 aa	Predicted RBP	12.91	□□□□□ -0.34
DHDDS-223	ENST00000531312	POLR1A	O95602	1720 aa	Predicted RBP	12.9	□□□□□ -0.34
DHDDS-223	ENST00000531312	CCDC141	Q6ZP82	1450 aa		12.9	□□□□□ -0.34
DHDDS-223	ENST00000531312	NLRP1	Q9C000	1473 aa		12.9	□□□□□ -0.34
DHDDS-223	ENST00000531312	MIA2	Q96PC5	1412 aa		12.89	□□□□□ -0.35
DHDDS-223	ENST00000531312	FBXO31	Q5XUX0	539 aa	Predicted RBP	12.89	□□□□□ -0.35
DHDDS-223	ENST00000531312	NEURL4	Q96JN8	1562 aa		12.89	□□□□□ -0.35
DHDDS-223	ENST00000531312	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	12.88	□□□□□ -0.35
DHDDS-223	ENST00000531312	MED14	O60244	1454 aa		12.88	□□□□□ -0.35
DHDDS-223	ENST00000531312	UGGT1	Q9NYU2	1555 aa		12.86	□□□□□ -0.35
DHDDS-223	ENST00000531312	SETD1A	O15047	1707 aa	Known RBP	12.86	□□□□□ -0.35
DHDDS-223	ENST00000531312	TSPY4	P0CV99	314 aa		12.86	□□□□□ -0.35
DHDDS-223	ENST00000531312	TSPY10	P0CW01	314 aa		12.86	□□□□□ -0.35
DHDDS-223	ENST00000531312	DEPDC5	O75140	1603 aa		12.86	□□□□□ -0.35
DHDDS-223	ENST00000531312	NPHP4	O75161	1426 aa	Predicted RBP	12.86	□□□□□ -0.35
DHDDS-223	ENST00000531312	VWDE	Q8N2E2	1590 aa		12.85	□□□□□ -0.35
DHDDS-223	ENST00000531312	CAMSAP2	Q08AD1	1489 aa		12.84	□□□□□ -0.35
DHDDS-223	ENST00000531312	POTEA	Q6S8J7	498 aa		12.82	□□□□□ -0.36
DHDDS-223	ENST00000531312	NCOA2	Q15596	1464 aa		12.82	□□□□□ -0.36
DHDDS-223	ENST00000531312	ARHGEF5	Q12774	1597 aa		12.81	□□□□□ -0.36
DHDDS-223	ENST00000531312	ALK	Q9UM73	1620 aa		12.81	□□□□□ -0.36
DHDDS-223	ENST00000531312	IQGAP1	P46940	1657 aa		12.8	□□□□□ -0.36
DHDDS-223	ENST00000531312	SYNM	O15061	1565 aa		12.79	□□□□□ -0.36
DHDDS-223	ENST00000531312	ZC3H13	Q5T200	1668 aa	Known RBP	12.79	□□□□□ -0.36
DHDDS-223	ENST00000531312	LRRC7	Q96NW7	1537 aa		12.78	□□□□□ -0.36
DHDDS-223	ENST00000531312	RNF17	Q9BXT8	1623 aa	Known RBP	12.78	□□□□□ -0.36
DHDDS-223	ENST00000531312	ABCC3	O15438	1527 aa		12.78	□□□□□ -0.36
DHDDS-223	ENST00000531312	ERVK-7	P63135	1459 aa		12.76	□□□□□ -0.37
DHDDS-223	ENST00000531312	MAST1	Q9Y2H9	1570 aa		12.76	□□□□□ -0.37
DHDDS-223	ENST00000531312	EIF2AK4	Q9P2K8	1649 aa	Known RBP	12.76	□□□□□ -0.37
DHDDS-223	ENST00000531312	SCAF11	Q99590	1463 aa	Known RBP	12.74	□□□□□ -0.37
DHDDS-223	ENST00000531312	EID1	Q9Y6B2	187 aa		12.73	□□□□□ -0.37
DHDDS-223	ENST00000531312	SLIT1	O75093	1534 aa		12.72	□□□□□ -0.37
DHDDS-223	ENST00000531312	LRRC9	Q6ZRR7	1453 aa		12.72	□□□□□ -0.37
DHDDS-223	ENST00000531312	ARHGAP23	Q9P227	1491 aa		12.72	□□□□□ -0.37
DHDDS-223	ENST00000531312	ARHGAP31	Q2M1Z3	1444 aa		12.71	□□□□□ -0.37
DHDDS-223	ENST00000531312	TXNDC2	Q86VQ3	553 aa		12.71	□□□□□ -0.37
DHDDS-223	ENST00000531312	DUOX2	Q9NRD8	1548 aa		12.71	□□□□□ -0.38
DHDDS-223	ENST00000531312	STRCP1	A6NGW2	1772 aa		12.71	□□□□□ -0.38
DHDDS-223	ENST00000531312	UBR1	Q8IWV7	1749 aa		12.71	□□□□□ -0.38
DHDDS-223	ENST00000531312	MYOM3	Q5VTT5	1437 aa		12.71	□□□□□ -0.38
DHDDS-223	ENST00000531312	UPF1	Q92900	1129 aa	Known RBP eCLIP	12.7	□□□□□ -0.38
DHDDS-223	ENST00000531312	MROH1	Q8NDA8	1641 aa		12.7	□□□□□ -0.38
DHDDS-223	ENST00000531312	LTK	P29376	864 aa		12.69	□□□□□ -0.38
DHDDS-223	ENST00000531312	FAM135B	Q49AJ0	1406 aa		12.69	□□□□□ -0.38
DHDDS-223	ENST00000531312	VPS8	Q8N3P4	1428 aa		12.67	□□□□□ -0.38
DHDDS-223	ENST00000531312	ERBIN	Q96RT1	1412 aa		12.67	□□□□□ -0.38
DHDDS-223	ENST00000531312	TMEM2	Q9UHN6	1383 aa		12.67	□□□□□ -0.38
DHDDS-223	ENST00000531312	PRDM15	P57071	1507 aa	Predicted RBP	12.67	□□□□□ -0.38
DHDDS-223	ENST00000531312	MAP3K1	Q13233	1512 aa		12.67	□□□□□ -0.38
DHDDS-223	ENST00000531312	STAG3	Q9UJ98	1225 aa		12.66	□□□□□ -0.38
DHDDS-223	ENST00000531312	KANK1	Q14678	1352 aa		12.66	□□□□□ -0.38
DHDDS-223	ENST00000531312	KIF15	Q9NS87	1388 aa		12.66	□□□□□ -0.38
DHDDS-223	ENST00000531312	CEP152	O94986	1710 aa		12.65	□□□□□ -0.38
DHDDS-223	ENST00000531312	KCNA6	P17658	529 aa		12.63	□□□□□ -0.39
DHDDS-223	ENST00000531312	TMEM94	Q12767	1356 aa		12.63	□□□□□ -0.39
DHDDS-223	ENST00000531312	KDM5A	P29375	1690 aa	Known RBP	12.63	□□□□□ -0.39
DHDDS-223	ENST00000531312	PIK3C2B	O00750	1634 aa		12.62	□□□□□ -0.39
DHDDS-223	ENST00000531312	EFCAB6	Q5THR3	1501 aa		12.62	□□□□□ -0.39
DHDDS-223	ENST00000531312	KANK4	Q5T7N3	995 aa	Predicted RBP	12.61	□□□□□ -0.39
DHDDS-223	ENST00000531312	PROSER2	Q86WR7	435 aa	Predicted RBP	12.61	□□□□□ -0.39
DHDDS-223	ENST00000531312	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	12.61	□□□□□ -0.39
DHDDS-223	ENST00000531312	RRP7BP	Q9NSQ0	103 aa		12.61	□□□□□ -0.39
DHDDS-223	ENST00000531312	XIRP1	Q702N8	1843 aa	Known RBP	12.6	□□□□□ -0.39
DHDDS-223	ENST00000531312	LMTK2	Q8IWU2	1503 aa		12.6	□□□□□ -0.39
DHDDS-223	ENST00000531312	ABCC5	O15440	1437 aa		12.6	□□□□□ -0.39
DHDDS-223	ENST00000531312	NKTR	P30414	1462 aa	Known RBP	12.59	□□□□□ -0.39
DHDDS-223	ENST00000531312	IDI1	Q13907	227 aa		12.59	□□□□□ -0.39
DHDDS-223	ENST00000531312	SLC52A1	Q9NWF4	448 aa		12.59	□□□□□ -0.39
DHDDS-223	ENST00000531312	MSH6	P52701	1360 aa		12.58	□□□□□ -0.4
DHDDS-223	ENST00000531312	TET3	O43151	1660 aa		12.58	□□□□□ -0.4
DHDDS-223	ENST00000531312	TRIM52	Q96A61	297 aa		12.58	□□□□□ -0.4
DHDDS-223	ENST00000531312	SLC26A8	Q96RN1	970 aa		12.58	□□□□□ -0.4
DHDDS-223	ENST00000531312	ROBO1	Q9Y6N7	1651 aa		12.57	□□□□□ -0.4
DHDDS-223	ENST00000531312	ANKRD30A	Q9BXX3	1397 aa		12.57	□□□□□ -0.4
DHDDS-223	ENST00000531312	DAPK1	P53355	1430 aa		12.57	□□□□□ -0.4
DHDDS-223	ENST00000531312	CROCC2	H7BZ55	1655 aa		12.57	□□□□□ -0.4
DHDDS-223	ENST00000531312	CFAP65	Q6ZU64	1925 aa	Known RBP	12.56	□□□□□ -0.4
DHDDS-223	ENST00000531312	HDGF	P51858	240 aa	Known RBP	12.56	□□□□□ -0.4
DHDDS-223	ENST00000531312	APLP2	Q06481	763 aa		12.56	□□□□□ -0.4
DHDDS-223	ENST00000531312	SLAIN2	Q9P270	581 aa		12.56	□□□□□ -0.4
DHDDS-223	ENST00000531312	ADGRB3	O60242	1522 aa		12.56	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms