RNA–Protein interactions for RNA: ENST00000530295.5

NDUFS3-208, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 3

Gene NDUFS3, Length 253 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-208ENST00000530295 DNMT1P26358 1616 aaKnown RBP24.39■■□□□ 1.5
NDUFS3-208ENST00000530295 KIF3BO15066 747 aa24.38■■□□□ 1.49
NDUFS3-208ENST00000530295 SENP3Q9H4L4 574 aaPredicted RBP24.37■■□□□ 1.49
NDUFS3-208ENST00000530295 POLR1AO95602 1720 aaPredicted RBP24.36■■□□□ 1.49
NDUFS3-208ENST00000530295 TNRQ92752 1358 aa24.36■■□□□ 1.49
NDUFS3-208ENST00000530295 MBD5Q9P267 1494 aa24.35■■□□□ 1.49
NDUFS3-208ENST00000530295 DHX29Q7Z478 1369 aaKnown RBP24.35■■□□□ 1.49
NDUFS3-208ENST00000530295 ALKQ9UM73 1620 aa24.35■■□□□ 1.49
NDUFS3-208ENST00000530295 TIAM1Q13009 1591 aa24.34■■□□□ 1.49
NDUFS3-208ENST00000530295 SHANK2Q9UPX8 1470 aa24.33■■□□□ 1.49
NDUFS3-208ENST00000530295 RTEL1-TNFRSF6BF6WH68 1400 aa24.32■■□□□ 1.48
NDUFS3-208ENST00000530295 WASHC2CQ9Y4E1 1318 aa24.31■■□□□ 1.48
NDUFS3-208ENST00000530295 NEURL4Q96JN8 1562 aa24.3■■□□□ 1.48
NDUFS3-208ENST00000530295 ANKLE2Q86XL3 938 aa24.3■■□□□ 1.48
NDUFS3-208ENST00000530295 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.29■■□□□ 1.48
NDUFS3-208ENST00000530295 EHBP1L1Q8N3D4 1523 aa24.28■■□□□ 1.48
NDUFS3-208ENST00000530295 THEMISQ8N1K5 641 aaPredicted RBP24.27■■□□□ 1.48
NDUFS3-208ENST00000530295 PZPP20742 1482 aa24.26■■□□□ 1.47
NDUFS3-208ENST00000530295 RGS17Q9UGC6 210 aaPredicted RBP24.26■■□□□ 1.47
NDUFS3-208ENST00000530295 KDM5DQ9BY66 1539 aa24.25■■□□□ 1.47
NDUFS3-208ENST00000530295 CEP162Q5TB80 1403 aa24.24■■□□□ 1.47
NDUFS3-208ENST00000530295 VWDEQ8N2E2 1590 aa24.24■■□□□ 1.47
NDUFS3-208ENST00000530295 CCDC141Q6ZP82 1450 aa24.23■■□□□ 1.47
NDUFS3-208ENST00000530295 MIA2Q96PC5 1412 aa24.22■■□□□ 1.47
NDUFS3-208ENST00000530295 NPHP4O75161 1426 aaPredicted RBP24.2■■□□□ 1.46
NDUFS3-208ENST00000530295 RSPH4AQ5TD94 716 aa24.2■■□□□ 1.46
NDUFS3-208ENST00000530295 CAMSAP2Q08AD1 1489 aa24.19■■□□□ 1.46
NDUFS3-208ENST00000530295 UGGT1Q9NYU2 1555 aa24.19■■□□□ 1.46
NDUFS3-208ENST00000530295 FAM135AQ9P2D6 1515 aa24.19■■□□□ 1.46
NDUFS3-208ENST00000530295 TSPY4P0CV99 314 aa24.18■■□□□ 1.46
NDUFS3-208ENST00000530295 TSPY10P0CW01 314 aa24.18■■□□□ 1.46
NDUFS3-208ENST00000530295 NCOA2Q15596 1464 aa24.17■■□□□ 1.46
NDUFS3-208ENST00000530295 NLRP1Q9C000 1473 aa24.17■■□□□ 1.46
NDUFS3-208ENST00000530295 RNF17Q9BXT8 1623 aaKnown RBP24.14■■□□□ 1.46
NDUFS3-208ENST00000530295 STRCP1A6NGW2 1772 aa24.14■■□□□ 1.45
NDUFS3-208ENST00000530295 CFAP65Q6ZU64 1925 aaKnown RBP24.13■■□□□ 1.45
NDUFS3-208ENST00000530295 MED14O60244 1454 aa24.13■■□□□ 1.45
NDUFS3-208ENST00000530295 SETD1AO15047 1707 aaKnown RBP24.13■■□□□ 1.45
NDUFS3-208ENST00000530295 DEPDC5O75140 1603 aa24.12■■□□□ 1.45
NDUFS3-208ENST00000530295 IQGAP1P46940 1657 aa24.11■■□□□ 1.45
NDUFS3-208ENST00000530295 POTEAQ6S8J7 498 aa24.09■■□□□ 1.45
NDUFS3-208ENST00000530295 LRRC7Q96NW7 1537 aa24.08■■□□□ 1.45
NDUFS3-208ENST00000530295 SYNMO15061 1565 aa24.07■■□□□ 1.44
NDUFS3-208ENST00000530295 ARHGEF5Q12774 1597 aa24.07■■□□□ 1.44
NDUFS3-208ENST00000530295 ABCC3O15438 1527 aa24.05■■□□□ 1.44
NDUFS3-208ENST00000530295 ERVK-7P63135 1459 aa24.02■■□□□ 1.44
NDUFS3-208ENST00000530295 ZC3H13Q5T200 1668 aaKnown RBP23.99■■□□□ 1.43
NDUFS3-208ENST00000530295 TXNDC2Q86VQ3 553 aa23.98■■□□□ 1.43
NDUFS3-208ENST00000530295 CEP152O94986 1710 aa23.98■■□□□ 1.43
NDUFS3-208ENST00000530295 LTKP29376 864 aa23.96■■□□□ 1.43
NDUFS3-208ENST00000530295 UBR1Q8IWV7 1749 aa23.96■■□□□ 1.43
NDUFS3-208ENST00000530295 SCAF11Q99590 1463 aaKnown RBP23.95■■□□□ 1.42
NDUFS3-208ENST00000530295 MAST1Q9Y2H9 1570 aa23.95■■□□□ 1.42
NDUFS3-208ENST00000530295 XIRP1Q702N8 1843 aaKnown RBP23.94■■□□□ 1.42
NDUFS3-208ENST00000530295 MROH1Q8NDA8 1641 aa23.93■■□□□ 1.42
NDUFS3-208ENST00000530295 EIF2AK4Q9P2K8 1649 aaKnown RBP23.93■■□□□ 1.42
NDUFS3-208ENST00000530295 LRRC9Q6ZRR7 1453 aa23.93■■□□□ 1.42
NDUFS3-208ENST00000530295 EID1Q9Y6B2 187 aa23.92■■□□□ 1.42
NDUFS3-208ENST00000530295 KANK4Q5T7N3 995 aaPredicted RBP23.9■■□□□ 1.42
NDUFS3-208ENST00000530295 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.9■■□□□ 1.42
NDUFS3-208ENST00000530295 STAG3Q9UJ98 1225 aa23.89■■□□□ 1.41
NDUFS3-208ENST00000530295 ARHGAP23Q9P227 1491 aa23.87■■□□□ 1.41
NDUFS3-208ENST00000530295 DUOX2Q9NRD8 1548 aa23.86■■□□□ 1.41
NDUFS3-208ENST00000530295 RRP7BPQ9NSQ0 103 aa23.86■■□□□ 1.41
NDUFS3-208ENST00000530295 MYOM3Q5VTT5 1437 aa23.85■■□□□ 1.41
NDUFS3-208ENST00000530295 SLIT1O75093 1534 aa23.85■■□□□ 1.41
NDUFS3-208ENST00000530295 VPS8Q8N3P4 1428 aa23.84■■□□□ 1.41
NDUFS3-208ENST00000530295 KIF15Q9NS87 1388 aa23.83■■□□□ 1.41
NDUFS3-208ENST00000530295 FAM135BQ49AJ0 1406 aa23.82■■□□□ 1.4
NDUFS3-208ENST00000530295 ROBO1Q9Y6N7 1651 aa23.82■■□□□ 1.4
NDUFS3-208ENST00000530295 RBM33Q96EV2 1170 aaKnown RBP23.81■■□□□ 1.4
NDUFS3-208ENST00000530295 ARHGAP31Q2M1Z3 1444 aa23.81■■□□□ 1.4
NDUFS3-208ENST00000530295 PIK3C2BO00750 1634 aa23.81■■□□□ 1.4
NDUFS3-208ENST00000530295 TMEM2Q9UHN6 1383 aa23.8■■□□□ 1.4
NDUFS3-208ENST00000530295 UPF1Q92900 1129 aaKnown RBP eCLIP23.8■■□□□ 1.4
NDUFS3-208ENST00000530295 TMEM94Q12767 1356 aa23.79■■□□□ 1.4
NDUFS3-208ENST00000530295 LOC105371045A0A1W2PR82 267 aa23.79■■□□□ 1.4
NDUFS3-208ENST00000530295 PROSER2Q86WR7 435 aaPredicted RBP23.79■■□□□ 1.4
NDUFS3-208ENST00000530295 SLC26A8Q96RN1 970 aa23.79■■□□□ 1.4
NDUFS3-208ENST00000530295 PRDM15P57071 1507 aaPredicted RBP23.78■■□□□ 1.4
NDUFS3-208ENST00000530295 KANK1Q14678 1352 aa23.78■■□□□ 1.4
NDUFS3-208ENST00000530295 KCNA6P17658 529 aa23.77■■□□□ 1.4
NDUFS3-208ENST00000530295 IDI1Q13907 227 aa23.77■■□□□ 1.4
NDUFS3-208ENST00000530295 ERBINQ96RT1 1412 aa23.76■■□□□ 1.39
NDUFS3-208ENST00000530295 BCANQ96GW7 911 aa23.75■■□□□ 1.39
NDUFS3-208ENST00000530295 ABCC5O15440 1437 aa23.75■■□□□ 1.39
NDUFS3-208ENST00000530295 CHIC2Q9UKJ5 165 aa23.73■■□□□ 1.39
NDUFS3-208ENST00000530295 EFCAB6Q5THR3 1501 aa23.73■■□□□ 1.39
NDUFS3-208ENST00000530295 MAP3K1Q13233 1512 aa23.71■■□□□ 1.39
NDUFS3-208ENST00000530295 PHLPP1O60346 1717 aa23.7■■□□□ 1.39
NDUFS3-208ENST00000530295 CROCC2H7BZ55 1655 aa23.7■■□□□ 1.39
NDUFS3-208ENST00000530295 TRIM52Q96A61 297 aa23.69■■□□□ 1.38
NDUFS3-208ENST00000530295 PTPN23Q9H3S7 1636 aa23.69■■□□□ 1.38
NDUFS3-208ENST00000530295 DAPK1P53355 1430 aa23.67■■□□□ 1.38
NDUFS3-208ENST00000530295 APLP2Q06481 763 aa23.66■■□□□ 1.38
NDUFS3-208ENST00000530295 TET3O43151 1660 aa23.66■■□□□ 1.38
NDUFS3-208ENST00000530295 MSH6P52701 1360 aa23.65■■□□□ 1.38
NDUFS3-208ENST00000530295 KDM5AP29375 1690 aaKnown RBP23.64■■□□□ 1.38
NDUFS3-208ENST00000530295 ANKRD30AQ9BXX3 1397 aa23.64■■□□□ 1.37
NDUFS3-208ENST00000530295 SLAIN2Q9P270 581 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms