RNA–Protein interactions for RNA: ENST00000530295.5

NDUFS3-208, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 3

Gene NDUFS3, Length 253 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-208ENST00000530295 NISCHQ9Y2I1 1504 aa38.22■■■■□ 3.71
NDUFS3-208ENST00000530295 ABCC9O60706 1549 aa35.22■■■■□ 3.23
NDUFS3-208ENST00000530295 CCDC180Q9P1Z9 1646 aa34.42■■■■□ 3.1
NDUFS3-208ENST00000530295 DNAJC5BQ9UF47 199 aa33.96■■■■□ 3.03
NDUFS3-208ENST00000530295 RB1CC1Q8TDY2 1594 aa33.03■■■□□ 2.88
NDUFS3-208ENST00000530295 DCAF8L2P0C7V8 631 aa32.7■■■□□ 2.83
NDUFS3-208ENST00000530295 NACADO15069 1562 aa32.67■■■□□ 2.82
NDUFS3-208ENST00000530295 PABPN1Q86U42 306 aaKnown RBP eCLIP32.6■■■□□ 2.81
NDUFS3-208ENST00000530295 UNC13AQ9UPW8 1703 aa32.4■■■□□ 2.78
NDUFS3-208ENST00000530295 BICRAQ9NZM4 1560 aa32.13■■■□□ 2.73
NDUFS3-208ENST00000530295 MYO15BQ96JP2 1530 aa32■■■□□ 2.71
NDUFS3-208ENST00000530295 DNAJC5Q9H3Z4 198 aa31.91■■■□□ 2.7
NDUFS3-208ENST00000530295 CECR2Q9BXF3 1484 aa31.81■■■□□ 2.68
NDUFS3-208ENST00000530295 CC2D2AQ9P2K1 1620 aa31.77■■■□□ 2.68
NDUFS3-208ENST00000530295 ZCCHC6Q5VYS8 1495 aaKnown RBP31.56■■■□□ 2.64
NDUFS3-208ENST00000530295 SHROOM4Q9ULL8 1493 aa31.49■■■□□ 2.63
NDUFS3-208ENST00000530295 SCRIBQ14160 1630 aa31.46■■■□□ 2.63
NDUFS3-208ENST00000530295 DCAF1Q9Y4B6 1507 aa31.46■■■□□ 2.63
NDUFS3-208ENST00000530295 EIF4G1Q04637 1599 aaKnown RBP31.42■■■□□ 2.62
NDUFS3-208ENST00000530295 CUX2O14529 1486 aa30.73■■■□□ 2.51
NDUFS3-208ENST00000530295 ERCC6Q03468 1493 aa30.48■■■□□ 2.47
NDUFS3-208ENST00000530295 NCAPD3P42695 1498 aa30.18■■■□□ 2.42
NDUFS3-208ENST00000530295 TRIM41Q8WV44 630 aa30.16■■■□□ 2.42
NDUFS3-208ENST00000530295 ATAD2BQ9ULI0 1458 aa30.06■■■□□ 2.4
NDUFS3-208ENST00000530295 NESP48681 1621 aa29.96■■■□□ 2.39
NDUFS3-208ENST00000530295 SMARCA2P51531 1590 aa29.93■■■□□ 2.38
NDUFS3-208ENST00000530295 SMARCA4P51532 1647 aa29.91■■■□□ 2.38
NDUFS3-208ENST00000530295 HMGXB3Q12766 1538 aa29.89■■■□□ 2.38
NDUFS3-208ENST00000530295 THOC2Q8NI27 1593 aaKnown RBP29.88■■■□□ 2.37
NDUFS3-208ENST00000530295 BAZ1BQ9UIG0 1483 aaKnown RBP29.77■■■□□ 2.36
NDUFS3-208ENST00000530295 BAZ1AQ9NRL2 1556 aaPredicted RBP29.69■■■□□ 2.34
NDUFS3-208ENST00000530295 KIF21AQ7Z4S6 1674 aa29.6■■■□□ 2.33
NDUFS3-208ENST00000530295 LAMC3Q9Y6N6 1575 aa29.56■■■□□ 2.32
NDUFS3-208ENST00000530295 PEG3Q9GZU2 1588 aa29.55■■■□□ 2.32
NDUFS3-208ENST00000530295 MROH2BQ7Z745 1585 aa29.48■■■□□ 2.31
NDUFS3-208ENST00000530295 PDS5BQ9NTI5 1447 aa29.45■■■□□ 2.31
NDUFS3-208ENST00000530295 CADPSQ9ULU8 1353 aa29.29■■■□□ 2.28
NDUFS3-208ENST00000530295 MRC2Q9UBG0 1479 aa29.22■■■□□ 2.27
NDUFS3-208ENST00000530295 WDR62O43379 1518 aa29.19■■■□□ 2.26
NDUFS3-208ENST00000530295 WIZO95785 1651 aa29.13■■■□□ 2.25
NDUFS3-208ENST00000530295 OSCARQ8IYS5 282 aa29.13■■■□□ 2.25
NDUFS3-208ENST00000530295 CEP164Q9UPV0 1460 aa29.03■■■□□ 2.24
NDUFS3-208ENST00000530295 RIMBP3CA6NJZ7 1639 aa28.98■■■□□ 2.23
NDUFS3-208ENST00000530295 RIMBP3BA6NNM3 1639 aa28.98■■■□□ 2.23
NDUFS3-208ENST00000530295 RIMBP3Q9UFD9 1639 aa28.98■■■□□ 2.23
NDUFS3-208ENST00000530295 FANCD2Q9BXW9 1451 aa28.97■■■□□ 2.23
NDUFS3-208ENST00000530295 CFTRP13569 1480 aa28.83■■■□□ 2.21
NDUFS3-208ENST00000530295 URB2Q14146 1524 aaKnown RBP28.75■■■□□ 2.19
NDUFS3-208ENST00000530295 ARHGEF11O15085 1522 aa28.74■■■□□ 2.19
NDUFS3-208ENST00000530295 RSF1Q96T23 1441 aaPredicted RBP28.72■■■□□ 2.19
NDUFS3-208ENST00000530295 TOP2AP11388 1531 aaKnown RBP28.68■■■□□ 2.18
NDUFS3-208ENST00000530295 TRHP20396 242 aaPredicted RBP28.63■■■□□ 2.17
NDUFS3-208ENST00000530295 CYB5RLQ6IPT4 315 aa28.57■■■□□ 2.16
NDUFS3-208ENST00000530295 AEBP2Q6ZN18 517 aaPredicted RBP28.57■■■□□ 2.16
NDUFS3-208ENST00000530295 PRDM2Q13029 1718 aa28.49■■■□□ 2.15
NDUFS3-208ENST00000530295 ZNF608Q9ULD9 1512 aaPredicted RBP28.49■■■□□ 2.15
NDUFS3-208ENST00000530295 IFT140Q96RY7 1462 aa28.45■■■□□ 2.14
NDUFS3-208ENST00000530295 CCDC88BA6NC98 1476 aa28.4■■■□□ 2.14
NDUFS3-208ENST00000530295 ARAP1Q96P48 1450 aa28.38■■■□□ 2.13
NDUFS3-208ENST00000530295 TOPBP1Q92547 1522 aa28.36■■■□□ 2.13
NDUFS3-208ENST00000530295 CHD1O14646 1710 aa28.3■■■□□ 2.12
NDUFS3-208ENST00000530295 EIF4G3O43432 1585 aaKnown RBP28.26■■■□□ 2.11
NDUFS3-208ENST00000530295 ABCC8Q09428 1581 aa28.24■■■□□ 2.11
NDUFS3-208ENST00000530295 FBLN2P98095 1184 aa28.21■■■□□ 2.11
NDUFS3-208ENST00000530295 AQRO60306 1485 aaKnown RBP eCLIP28.21■■■□□ 2.115e-6■■□□□ 14.3
NDUFS3-208ENST00000530295 DNMBPQ6XZF7 1577 aa28.2■■■□□ 2.1
NDUFS3-208ENST00000530295 TARBP1Q13395 1621 aaKnown RBP28.1■■■□□ 2.09
NDUFS3-208ENST00000530295 POLA1P09884 1462 aaPredicted RBP28.04■■■□□ 2.08
NDUFS3-208ENST00000530295 RAD54L2Q9Y4B4 1467 aa28.01■■■□□ 2.07
NDUFS3-208ENST00000530295 TDRD9Q8NDG6 1382 aaKnown RBP27.99■■■□□ 2.07
NDUFS3-208ENST00000530295 SOGA1O94964 1423 aa27.95■■■□□ 2.07
NDUFS3-208ENST00000530295 CHMP7Q8WUX9 453 aaPredicted RBP27.88■■■□□ 2.05
NDUFS3-208ENST00000530295 SNAPC4Q5SXM2 1469 aa27.87■■■□□ 2.05
NDUFS3-208ENST00000530295 CLASP1Q7Z460 1538 aa27.87■■■□□ 2.05
NDUFS3-208ENST00000530295 FGD5Q6ZNL6 1462 aa27.83■■■□□ 2.04
NDUFS3-208ENST00000530295 SYNJ1O43426 1573 aa27.76■■■□□ 2.03
NDUFS3-208ENST00000530295 MAGI1Q96QZ7 1491 aaPredicted RBP27.73■■■□□ 2.03
NDUFS3-208ENST00000530295 CUX1P39880 1505 aa27.72■■■□□ 2.03
NDUFS3-208ENST00000530295 WDR97A6NE52 1622 aa27.72■■■□□ 2.03
NDUFS3-208ENST00000530295 GRIN2BQ13224 1484 aa27.71■■■□□ 2.03
NDUFS3-208ENST00000530295 SYNJ2O15056 1496 aa27.66■■■□□ 2.02
NDUFS3-208ENST00000530295 GAPVD1Q14C86 1478 aa27.64■■■□□ 2.01
NDUFS3-208ENST00000530295 PBRM1Q86U86 1689 aa27.57■■■□□ 2
NDUFS3-208ENST00000530295 ILDR1Q86SU0 546 aaPredicted RBP27.49■■□□□ 1.99
NDUFS3-208ENST00000530295 ABCA10Q8WWZ4 1543 aa27.44■■□□□ 1.98
NDUFS3-208ENST00000530295 ABCA5Q8WWZ7 1642 aa27.42■■□□□ 1.98
NDUFS3-208ENST00000530295 KIF13AQ9H1H9 1805 aa27.41■■□□□ 1.98
NDUFS3-208ENST00000530295 ERCC6L2Q5T890 1561 aa27.4■■□□□ 1.98
NDUFS3-208ENST00000530295 GRIN2AQ12879 1464 aa27.35■■□□□ 1.97
NDUFS3-208ENST00000530295 SUPT5HO00267 1087 aaKnown RBP27.32■■□□□ 1.96
NDUFS3-208ENST00000530295 WRNQ14191 1432 aaPredicted RBP eCLIP27.29■■□□□ 1.96
NDUFS3-208ENST00000530295 CEP170Q5SW79 1584 aa27.28■■□□□ 1.96
NDUFS3-208ENST00000530295 ADAMTS12P58397 1594 aa27.26■■□□□ 1.96
NDUFS3-208ENST00000530295 NUP160Q12769 1436 aa27.25■■□□□ 1.95
NDUFS3-208ENST00000530295 FHAD1B1AJZ9 1412 aa27.2■■□□□ 1.94
NDUFS3-208ENST00000530295 KDM4FA0A1W2PPD8 638 aa27.19■■□□□ 1.94
NDUFS3-208ENST00000530295 SHROOM2Q13796 1616 aa27.16■■□□□ 1.94
NDUFS3-208ENST00000530295 TOP2BQ02880 1626 aa27.13■■□□□ 1.93
NDUFS3-208ENST00000530295 BIVM-ERCC5R4GMW8 1640 aa27.12■■□□□ 1.93
NDUFS3-208ENST00000530295 PRG4Q92954 1404 aaPredicted RBP27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 317.4 ms