RNA–Protein interactions for RNA: ENST00000529878.1

SCN4B-204, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 4 BASIC

Gene SCN4B, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-204ENST00000529878 MAST1Q9Y2H9 1570 aa24.49■■□□□ 1.51
SCN4B-204ENST00000529878 CLTCQ00610 1675 aaKnown RBP24.49■■□□□ 1.51
SCN4B-204ENST00000529878 TSPY4P0CV99 314 aa24.48■■□□□ 1.51
SCN4B-204ENST00000529878 TSPY10P0CW01 314 aa24.48■■□□□ 1.51
SCN4B-204ENST00000529878 FGD6Q6ZV73 1430 aa24.48■■□□□ 1.51
SCN4B-204ENST00000529878 DHX29Q7Z478 1369 aaKnown RBP24.48■■□□□ 1.51
SCN4B-204ENST00000529878 CROCC2H7BZ55 1655 aa24.47■■□□□ 1.51
SCN4B-204ENST00000529878 PTPRKQ15262 1439 aa24.47■■□□□ 1.51
SCN4B-204ENST00000529878 TCOF1Q13428 1488 aaKnown RBP24.46■■□□□ 1.51
SCN4B-204ENST00000529878 ZNF335Q9H4Z2 1342 aaPredicted RBP24.46■■□□□ 1.51
SCN4B-204ENST00000529878 PLA2R1Q13018 1463 aa24.45■■□□□ 1.51
SCN4B-204ENST00000529878 UBAP1LF5GYI3 381 aa24.45■■□□□ 1.5
SCN4B-204ENST00000529878 DNMT1P26358 1616 aaKnown RBP24.43■■□□□ 1.5
SCN4B-204ENST00000529878 KIF3BO15066 747 aa24.42■■□□□ 1.5
SCN4B-204ENST00000529878 SHANK2Q9UPX8 1470 aa24.39■■□□□ 1.5
SCN4B-204ENST00000529878 SPATA31D1Q6ZQQ2 1576 aa24.38■■□□□ 1.49
SCN4B-204ENST00000529878 CEP170BQ9Y4F5 1589 aaPredicted RBP24.38■■□□□ 1.49
SCN4B-204ENST00000529878 ABCC5O15440 1437 aa24.38■■□□□ 1.49
SCN4B-204ENST00000529878 MYO3AQ8NEV4 1616 aa24.36■■□□□ 1.49
SCN4B-204ENST00000529878 ZNF142P52746 1687 aaPredicted RBP24.36■■□□□ 1.49
SCN4B-204ENST00000529878 DAPK1P53355 1430 aa24.35■■□□□ 1.49
SCN4B-204ENST00000529878 PPARGC1BQ86YN6 1023 aaKnown RBP24.34■■□□□ 1.49
SCN4B-204ENST00000529878 A2ML1A8K2U0 1454 aa24.33■■□□□ 1.49
SCN4B-204ENST00000529878 KDM5DQ9BY66 1539 aa24.33■■□□□ 1.49
SCN4B-204ENST00000529878 EIF2AK4Q9P2K8 1649 aaKnown RBP24.32■■□□□ 1.48
SCN4B-204ENST00000529878 FAM50AQ14320 339 aaKnown RBP24.31■■□□□ 1.48
SCN4B-204ENST00000529878 FBXO31Q5XUX0 539 aaPredicted RBP24.31■■□□□ 1.48
SCN4B-204ENST00000529878 WASHC2CQ9Y4E1 1318 aa24.31■■□□□ 1.48
SCN4B-204ENST00000529878 KIF15Q9NS87 1388 aa24.3■■□□□ 1.48
SCN4B-204ENST00000529878 RRP7BPQ9NSQ0 103 aa24.3■■□□□ 1.48
SCN4B-204ENST00000529878 CHIC2Q9UKJ5 165 aa24.3■■□□□ 1.48
SCN4B-204ENST00000529878 RNF17Q9BXT8 1623 aaKnown RBP24.3■■□□□ 1.48
SCN4B-204ENST00000529878 DUOX2Q9NRD8 1548 aa24.3■■□□□ 1.48
SCN4B-204ENST00000529878 ANKLE2Q86XL3 938 aa24.29■■□□□ 1.48
SCN4B-204ENST00000529878 THEMISQ8N1K5 641 aaPredicted RBP24.29■■□□□ 1.48
SCN4B-204ENST00000529878 TOM1O60784 492 aa24.28■■□□□ 1.48
SCN4B-204ENST00000529878 FAM135AQ9P2D6 1515 aa24.28■■□□□ 1.48
SCN4B-204ENST00000529878 TNRQ92752 1358 aa24.28■■□□□ 1.48
SCN4B-204ENST00000529878 MROH1Q8NDA8 1641 aa24.26■■□□□ 1.47
SCN4B-204ENST00000529878 ABCC3O15438 1527 aa24.23■■□□□ 1.47
SCN4B-204ENST00000529878 ADGRL2O95490 1459 aa24.22■■□□□ 1.47
SCN4B-204ENST00000529878 PZPP20742 1482 aa24.21■■□□□ 1.47
SCN4B-204ENST00000529878 ERBINQ96RT1 1412 aa24.21■■□□□ 1.47
SCN4B-204ENST00000529878 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.21■■□□□ 1.47
SCN4B-204ENST00000529878 SCAF1Q9H7N4 1312 aaKnown RBP24.21■■□□□ 1.47
SCN4B-204ENST00000529878 ANKRD30AQ9BXX3 1397 aa24.2■■□□□ 1.46
SCN4B-204ENST00000529878 PIP4K2BP78356 416 aa24.2■■□□□ 1.46
SCN4B-204ENST00000529878 CEP152O94986 1710 aa24.2■■□□□ 1.46
SCN4B-204ENST00000529878 CPS1P31327 1500 aa24.2■■□□□ 1.46
SCN4B-204ENST00000529878 ZC3H13Q5T200 1668 aaKnown RBP24.19■■□□□ 1.46
SCN4B-204ENST00000529878 HSPA1LP34931 641 aa24.19■■□□□ 1.46
SCN4B-204ENST00000529878 PRDM15P57071 1507 aaPredicted RBP24.16■■□□□ 1.46
SCN4B-204ENST00000529878 NLRP1Q9C000 1473 aa24.16■■□□□ 1.46
SCN4B-204ENST00000529878 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.15■■□□□ 1.46
SCN4B-204ENST00000529878 DEPDC5O75140 1603 aa24.14■■□□□ 1.46
SCN4B-204ENST00000529878 RRBP1Q9P2E9 1410 aaKnown RBP24.14■■□□□ 1.45
SCN4B-204ENST00000529878 POLR1AO95602 1720 aaPredicted RBP24.13■■□□□ 1.45
SCN4B-204ENST00000529878 NEURL4Q96JN8 1562 aa24.12■■□□□ 1.45
SCN4B-204ENST00000529878 MED14O60244 1454 aa24.11■■□□□ 1.45
SCN4B-204ENST00000529878 UGGT1Q9NYU2 1555 aa24.11■■□□□ 1.45
SCN4B-204ENST00000529878 NPHP4O75161 1426 aaPredicted RBP24.1■■□□□ 1.45
SCN4B-204ENST00000529878 ITGAEP38570 1179 aa24.09■■□□□ 1.45
SCN4B-204ENST00000529878 ERVK-7P63135 1459 aa24.08■■□□□ 1.45
SCN4B-204ENST00000529878 ROCK1Q13464 1354 aa24.08■■□□□ 1.45
SCN4B-204ENST00000529878 KANK1Q14678 1352 aa24.05■■□□□ 1.44
SCN4B-204ENST00000529878 VWDEQ8N2E2 1590 aa24.05■■□□□ 1.44
SCN4B-204ENST00000529878 CFAP65Q6ZU64 1925 aaKnown RBP24.05■■□□□ 1.44
SCN4B-204ENST00000529878 ANKRD50Q9ULJ7 1429 aa24.04■■□□□ 1.44
SCN4B-204ENST00000529878 ARHGAP31Q2M1Z3 1444 aa23.99■■□□□ 1.43
SCN4B-204ENST00000529878 PHF23Q9BUL5 403 aaPredicted RBP23.98■■□□□ 1.43
SCN4B-204ENST00000529878 LMTK2Q8IWU2 1503 aa23.98■■□□□ 1.43
SCN4B-204ENST00000529878 MED1Q15648 1581 aaPredicted RBP23.98■■□□□ 1.43
SCN4B-204ENST00000529878 UNC13BO14795 1591 aa23.97■■□□□ 1.43
SCN4B-204ENST00000529878 IQGAP1P46940 1657 aa23.96■■□□□ 1.43
SCN4B-204ENST00000529878 EFCAB6Q5THR3 1501 aa23.95■■□□□ 1.43
SCN4B-204ENST00000529878 TXNDC2Q86VQ3 553 aa23.95■■□□□ 1.42
SCN4B-204ENST00000529878 LRRC7Q96NW7 1537 aa23.94■■□□□ 1.42
SCN4B-204ENST00000529878 GCC2Q8IWJ2 1684 aa23.94■■□□□ 1.42
SCN4B-204ENST00000529878 EID1Q9Y6B2 187 aa23.92■■□□□ 1.42
SCN4B-204ENST00000529878 UBR1Q8IWV7 1749 aa23.92■■□□□ 1.42
SCN4B-204ENST00000529878 LTKP29376 864 aa23.91■■□□□ 1.42
SCN4B-204ENST00000529878 ALKQ9UM73 1620 aa23.91■■□□□ 1.42
SCN4B-204ENST00000529878 SYNMO15061 1565 aa23.9■■□□□ 1.42
SCN4B-204ENST00000529878 TET3O43151 1660 aa23.89■■□□□ 1.42
SCN4B-204ENST00000529878 PIK3C2BO00750 1634 aa23.89■■□□□ 1.42
SCN4B-204ENST00000529878 IQGAP3Q86VI3 1631 aa23.88■■□□□ 1.41
SCN4B-204ENST00000529878 SCAF11Q99590 1463 aaKnown RBP23.87■■□□□ 1.41
SCN4B-204ENST00000529878 SENP3Q9H4L4 574 aaPredicted RBP23.87■■□□□ 1.41
SCN4B-204ENST00000529878 STRCP1A6NGW2 1772 aa23.86■■□□□ 1.41
SCN4B-204ENST00000529878 ARHGAP23Q9P227 1491 aa23.84■■□□□ 1.41
SCN4B-204ENST00000529878 STAG3Q9UJ98 1225 aa23.84■■□□□ 1.41
SCN4B-204ENST00000529878 NOS1P29475 1434 aa23.84■■□□□ 1.41
SCN4B-204ENST00000529878 RPRD2Q5VT52 1461 aaKnown RBP23.83■■□□□ 1.41
SCN4B-204ENST00000529878 SLIT1O75093 1534 aa23.83■■□□□ 1.41
SCN4B-204ENST00000529878 NAIPQ13075 1403 aa23.82■■□□□ 1.4
SCN4B-204ENST00000529878 NUP155O75694 1391 aa23.81■■□□□ 1.4
SCN4B-204ENST00000529878 IDI1Q13907 227 aa23.81■■□□□ 1.4
SCN4B-204ENST00000529878 HFM1A2PYH4 1435 aa23.81■■□□□ 1.4
SCN4B-204ENST00000529878 E9PCH4 1651 aa23.8■■□□□ 1.4
SCN4B-204ENST00000529878 TMEM2Q9UHN6 1383 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms