RNA–Protein interactions for RNA: ENST00000528950.1

AMBRA1-206, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5 BASIC

Gene AMBRA1, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-206ENST00000528950 HFM1A2PYH4 1435 aa11.2□□□□□ -0.62
AMBRA1-206ENST00000528950 USP47Q96K76 1375 aa11.2□□□□□ -0.62
AMBRA1-206ENST00000528950 CARMIL2Q6F5E8 1435 aa11.19□□□□□ -0.62
AMBRA1-206ENST00000528950 FGD1P98174 961 aa11.19□□□□□ -0.62
AMBRA1-206ENST00000528950 NAIPQ13075 1403 aa11.19□□□□□ -0.62
AMBRA1-206ENST00000528950 MYBBP1AQ9BQG0 1328 aaKnown RBP11.19□□□□□ -0.62
AMBRA1-206ENST00000528950 C20orf194Q5TEA3 1177 aa11.19□□□□□ -0.62
AMBRA1-206ENST00000528950 NPM1P06748 294 aaKnown RBP eCLIP11.19□□□□□ -0.62
AMBRA1-206ENST00000528950 MYH16Q9H6N6 1097 aa11.19□□□□□ -0.62
AMBRA1-206ENST00000528950 PTPRKQ15262 1439 aa11.18□□□□□ -0.62
AMBRA1-206ENST00000528950 ST20-MTHFSA0A0A6YYL1 179 aa11.18□□□□□ -0.62
AMBRA1-206ENST00000528950 ARHGEF11O15085 1522 aa11.18□□□□□ -0.62
AMBRA1-206ENST00000528950 CENPQQ7L2Z9 268 aaPredicted RBP11.17□□□□□ -0.62
AMBRA1-206ENST00000528950 RALBP1Q15311 655 aa11.17□□□□□ -0.62
AMBRA1-206ENST00000528950 RGL3Q3MIN7 710 aa11.17□□□□□ -0.62
AMBRA1-206ENST00000528950 PDE3BQ13370 1112 aa11.17□□□□□ -0.62
AMBRA1-206ENST00000528950 NLRP13Q86W25 1043 aa11.16□□□□□ -0.62
AMBRA1-206ENST00000528950 PRDM4Q9UKN5 801 aa11.16□□□□□ -0.62
AMBRA1-206ENST00000528950 RNF123Q5XPI4 1314 aa11.16□□□□□ -0.62
AMBRA1-206ENST00000528950 RRAGDQ9NQL2 400 aaPredicted RBP11.16□□□□□ -0.62
AMBRA1-206ENST00000528950 KIF15Q9NS87 1388 aa11.16□□□□□ -0.62
AMBRA1-206ENST00000528950 PLCB2Q00722 1185 aa11.16□□□□□ -0.62
AMBRA1-206ENST00000528950 KDM5BQ9UGL1 1544 aa11.15□□□□□ -0.62
AMBRA1-206ENST00000528950 KTN1Q86UP2 1357 aaKnown RBP11.15□□□□□ -0.62
AMBRA1-206ENST00000528950 PTPRGP23470 1445 aa11.15□□□□□ -0.62
AMBRA1-206ENST00000528950 PCF11O94913 1555 aaKnown RBP11.15□□□□□ -0.62
AMBRA1-206ENST00000528950 IQGAP2Q13576 1575 aa11.15□□□□□ -0.62
AMBRA1-206ENST00000528950 A0A0U1RQG5 324 aaPredicted RBP11.15□□□□□ -0.63
AMBRA1-206ENST00000528950 TRHP20396 242 aaPredicted RBP11.15□□□□□ -0.63
AMBRA1-206ENST00000528950 PKD2Q13563 968 aa11.15□□□□□ -0.63
AMBRA1-206ENST00000528950 CLASP1Q7Z460 1538 aa11.14□□□□□ -0.63
AMBRA1-206ENST00000528950 ZBTB7CA1YPR0 619 aa11.14□□□□□ -0.63
AMBRA1-206ENST00000528950 NCOA2Q15596 1464 aa11.14□□□□□ -0.63
AMBRA1-206ENST00000528950 HSP90AB1P08238 724 aaKnown RBP11.14□□□□□ -0.63
AMBRA1-206ENST00000528950 TPRNQ4KMQ1 711 aa11.14□□□□□ -0.63
AMBRA1-206ENST00000528950 MAP3K1Q13233 1512 aa11.13□□□□□ -0.63
AMBRA1-206ENST00000528950 MYOM3Q5VTT5 1437 aa11.12□□□□□ -0.63
AMBRA1-206ENST00000528950 HSCBQ8IWL3 235 aa11.12□□□□□ -0.63
AMBRA1-206ENST00000528950 PTPN23Q9H3S7 1636 aa11.12□□□□□ -0.63
AMBRA1-206ENST00000528950 RIMBP3CA6NJZ7 1639 aa11.11□□□□□ -0.63
AMBRA1-206ENST00000528950 RIMBP3BA6NNM3 1639 aa11.11□□□□□ -0.63
AMBRA1-206ENST00000528950 RIMBP3Q9UFD9 1639 aa11.11□□□□□ -0.63
AMBRA1-206ENST00000528950 ERCC6L2Q5T890 1561 aa11.11□□□□□ -0.63
AMBRA1-206ENST00000528950 NEUROD2Q15784 382 aa11.1□□□□□ -0.63
AMBRA1-206ENST00000528950 CCDC146Q8IYE0 955 aa11.1□□□□□ -0.63
AMBRA1-206ENST00000528950 PANK2Q9BZ23 570 aa11.1□□□□□ -0.63
AMBRA1-206ENST00000528950 CASKIN1Q8WXD9 1431 aa11.09□□□□□ -0.63
AMBRA1-206ENST00000528950 BRD4O60885 1362 aaPredicted RBP11.09□□□□□ -0.63
AMBRA1-206ENST00000528950 RBM10P98175 930 aaKnown RBP11.09□□□□□ -0.63
AMBRA1-206ENST00000528950 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.08□□□□□ -0.64
AMBRA1-206ENST00000528950 C8orf34Q49A92 452 aa11.08□□□□□ -0.64
AMBRA1-206ENST00000528950 ROCK2O75116 1388 aaKnown RBP11.08□□□□□ -0.64
AMBRA1-206ENST00000528950 CHAF1AQ13111 956 aaPredicted RBP11.07□□□□□ -0.64
AMBRA1-206ENST00000528950 FYCO1Q9BQS8 1478 aa11.07□□□□□ -0.64
AMBRA1-206ENST00000528950 DHX29Q7Z478 1369 aaKnown RBP11.07□□□□□ -0.64
AMBRA1-206ENST00000528950 GOLGA2Q08379 1002 aa11.07□□□□□ -0.64
AMBRA1-206ENST00000528950 FTSJ3Q8IY81 847 aaKnown RBP11.07□□□□□ -0.64
AMBRA1-206ENST00000528950 ZNF644Q9H582 1327 aaPredicted RBP11.07□□□□□ -0.64
AMBRA1-206ENST00000528950 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.07□□□□□ -0.642e-7■■□□□ 11.4
AMBRA1-206ENST00000528950 RRP9O43818 475 aaKnown RBP11.06□□□□□ -0.64
AMBRA1-206ENST00000528950 MFAP1P55081 439 aaKnown RBP11.06□□□□□ -0.64
AMBRA1-206ENST00000528950 GBP4Q96PP9 640 aa11.06□□□□□ -0.64
AMBRA1-206ENST00000528950 FAM13BQ9NYF5 915 aa11.06□□□□□ -0.64
AMBRA1-206ENST00000528950 CTTNBP2Q8WZ74 1663 aa11.05□□□□□ -0.64
AMBRA1-206ENST00000528950 COG6Q9Y2V7 657 aa11.05□□□□□ -0.64
AMBRA1-206ENST00000528950 KNSTRNQ9Y448 316 aa11.05□□□□□ -0.64
AMBRA1-206ENST00000528950 FOXD4L1Q9NU39 408 aa11.05□□□□□ -0.64
AMBRA1-206ENST00000528950 XRCC6P12956 609 aaKnown RBP eCLIP11.05□□□□□ -0.64
AMBRA1-206ENST00000528950 ADAMTS8Q9UP79 889 aa11.05□□□□□ -0.64
AMBRA1-206ENST00000528950 PANK3Q9H999 370 aa11.04□□□□□ -0.64
AMBRA1-206ENST00000528950 CFDP1Q9UEE9 299 aaPredicted RBP11.04□□□□□ -0.64
AMBRA1-206ENST00000528950 DISP1Q96F81 1524 aa11.04□□□□□ -0.64
AMBRA1-206ENST00000528950 UGGT2Q9NYU1 1516 aa11.04□□□□□ -0.64
AMBRA1-206ENST00000528950 AEBP2Q6ZN18 517 aaPredicted RBP11.03□□□□□ -0.64
AMBRA1-206ENST00000528950 TRAK2O60296 914 aa11.03□□□□□ -0.64
AMBRA1-206ENST00000528950 CLUAP1Q96AJ1 413 aa11.03□□□□□ -0.64
AMBRA1-206ENST00000528950 ANKRD30BQ9BXX2 1392 aa11.02□□□□□ -0.64
AMBRA1-206ENST00000528950 BCAR3O75815 825 aa11.02□□□□□ -0.64
AMBRA1-206ENST00000528950 POLR1AO95602 1720 aaPredicted RBP11.02□□□□□ -0.65
AMBRA1-206ENST00000528950 KIAA2012Q0VF49 1180 aa11.02□□□□□ -0.65
AMBRA1-206ENST00000528950 ESPNB1AK53 854 aa11.01□□□□□ -0.65
AMBRA1-206ENST00000528950 SEC24BO95487 1268 aa11.01□□□□□ -0.65
AMBRA1-206ENST00000528950 PANK1Q8TE04 598 aa11.01□□□□□ -0.65
AMBRA1-206ENST00000528950 BCL2L13Q9BXK5 485 aa11.01□□□□□ -0.65
AMBRA1-206ENST00000528950 SHROOM2Q13796 1616 aa11.01□□□□□ -0.65
AMBRA1-206ENST00000528950 PLB1Q6P1J6 1458 aa11.01□□□□□ -0.65
AMBRA1-206ENST00000528950 KIAA0556O60303 1618 aa11□□□□□ -0.65
AMBRA1-206ENST00000528950 MRE11P49959 708 aa11□□□□□ -0.65
AMBRA1-206ENST00000528950 MCM4P33991 863 aa10.99□□□□□ -0.65
AMBRA1-206ENST00000528950 TNNT3P45378 269 aaPredicted RBP10.99□□□□□ -0.65
AMBRA1-206ENST00000528950 APAF1O14727 1248 aa10.99□□□□□ -0.65
AMBRA1-206ENST00000528950 NUP155O75694 1391 aa10.99□□□□□ -0.65
AMBRA1-206ENST00000528950 CLCN1P35523 988 aa10.99□□□□□ -0.65
AMBRA1-206ENST00000528950 MIA2Q96PC5 1412 aa10.98□□□□□ -0.65
AMBRA1-206ENST00000528950 GRPEL1Q9HAV7 217 aa10.98□□□□□ -0.65
AMBRA1-206ENST00000528950 RPRD2Q5VT52 1461 aaKnown RBP10.98□□□□□ -0.65
AMBRA1-206ENST00000528950 MAPK8IP3Q9UPT6 1336 aa10.98□□□□□ -0.65
AMBRA1-206ENST00000528950 PLEKHD1A6NEE1 506 aa10.98□□□□□ -0.65
AMBRA1-206ENST00000528950 FAM69CQ0P6D2 419 aa10.98□□□□□ -0.65
AMBRA1-206ENST00000528950 CALD1Q05682 793 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms