RNA–Protein interactions for RNA: ENST00000528575.1

YIF1A-212, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 3

Gene YIF1A, Length 532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-212ENST00000528575 FGD6Q6ZV73 1430 aa28.96■■■□□ 2.23
YIF1A-212ENST00000528575 KIF3BO15066 747 aa28.96■■■□□ 2.23
YIF1A-212ENST00000528575 TSPY4P0CV99 314 aa28.96■■■□□ 2.23
YIF1A-212ENST00000528575 TSPY10P0CW01 314 aa28.96■■■□□ 2.23
YIF1A-212ENST00000528575 TCOF1Q13428 1488 aaKnown RBP28.96■■■□□ 2.23
YIF1A-212ENST00000528575 NCKAP5LQ9HCH0 1330 aa28.95■■■□□ 2.23
YIF1A-212ENST00000528575 FBXO31Q5XUX0 539 aaPredicted RBP28.94■■■□□ 2.22
YIF1A-212ENST00000528575 KDM5DQ9BY66 1539 aa28.94■■■□□ 2.22
YIF1A-212ENST00000528575 PLA2R1Q13018 1463 aa28.93■■■□□ 2.22
YIF1A-212ENST00000528575 DNMT1P26358 1616 aaKnown RBP28.92■■■□□ 2.22
YIF1A-212ENST00000528575 PTPN23Q9H3S7 1636 aa28.92■■■□□ 2.22
YIF1A-212ENST00000528575 PZPP20742 1482 aa28.91■■■□□ 2.22
YIF1A-212ENST00000528575 MROH1Q8NDA8 1641 aa28.91■■■□□ 2.22
YIF1A-212ENST00000528575 RNF17Q9BXT8 1623 aaKnown RBP28.9■■■□□ 2.22
YIF1A-212ENST00000528575 FAM135AQ9P2D6 1515 aa28.89■■■□□ 2.22
YIF1A-212ENST00000528575 A2ML1A8K2U0 1454 aa28.89■■■□□ 2.22
YIF1A-212ENST00000528575 SHANK2Q9UPX8 1470 aa28.86■■■□□ 2.21
YIF1A-212ENST00000528575 TNRQ92752 1358 aa28.83■■■□□ 2.21
YIF1A-212ENST00000528575 ABCC3O15438 1527 aa28.83■■■□□ 2.21
YIF1A-212ENST00000528575 NEURL4Q96JN8 1562 aa28.83■■■□□ 2.21
YIF1A-212ENST00000528575 ZNF335Q9H4Z2 1342 aaPredicted RBP28.82■■■□□ 2.2
YIF1A-212ENST00000528575 ABCC5O15440 1437 aa28.8■■■□□ 2.2
YIF1A-212ENST00000528575 WASHC2CQ9Y4E1 1318 aa28.8■■■□□ 2.2
YIF1A-212ENST00000528575 EIF2AK4Q9P2K8 1649 aaKnown RBP28.8■■■□□ 2.2
YIF1A-212ENST00000528575 CROCC2H7BZ55 1655 aa28.79■■■□□ 2.2
YIF1A-212ENST00000528575 PKD2Q13563 968 aa28.78■■■□□ 2.2
YIF1A-212ENST00000528575 DAPK1P53355 1430 aa28.77■■■□□ 2.2
YIF1A-212ENST00000528575 IQSEC2Q5JU85 1478 aa28.75■■■□□ 2.19
YIF1A-212ENST00000528575 SPATA31D1Q6ZQQ2 1576 aa28.74■■■□□ 2.19
YIF1A-212ENST00000528575 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.74■■■□□ 2.193e-8■■■■□ 19.8
YIF1A-212ENST00000528575 CEP152O94986 1710 aa28.73■■■□□ 2.19
YIF1A-212ENST00000528575 POLR1AO95602 1720 aaPredicted RBP28.73■■■□□ 2.19
YIF1A-212ENST00000528575 ZC3H13Q5T200 1668 aaKnown RBP28.73■■■□□ 2.19
YIF1A-212ENST00000528575 DUOX2Q9NRD8 1548 aa28.72■■■□□ 2.19
YIF1A-212ENST00000528575 ERVK-7P63135 1459 aa28.69■■■□□ 2.18
YIF1A-212ENST00000528575 NLRP1Q9C000 1473 aa28.69■■■□□ 2.18
YIF1A-212ENST00000528575 ANKRD30AQ9BXX3 1397 aa28.67■■■□□ 2.18
YIF1A-212ENST00000528575 KIF15Q9NS87 1388 aa28.67■■■□□ 2.18
YIF1A-212ENST00000528575 FAM50AQ14320 339 aaKnown RBP28.67■■■□□ 2.18
YIF1A-212ENST00000528575 PRDM15P57071 1507 aaPredicted RBP28.67■■■□□ 2.18
YIF1A-212ENST00000528575 UGGT1Q9NYU2 1555 aa28.66■■■□□ 2.18
YIF1A-212ENST00000528575 ERBINQ96RT1 1412 aa28.65■■■□□ 2.18
YIF1A-212ENST00000528575 ADGRL2O95490 1459 aa28.65■■■□□ 2.18
YIF1A-212ENST00000528575 DEPDC5O75140 1603 aa28.64■■■□□ 2.18
YIF1A-212ENST00000528575 VWDEQ8N2E2 1590 aa28.62■■■□□ 2.17
YIF1A-212ENST00000528575 RRP7BPQ9NSQ0 103 aa28.62■■■□□ 2.17
YIF1A-212ENST00000528575 MED14O60244 1454 aa28.61■■■□□ 2.17
YIF1A-212ENST00000528575 CFAP65Q6ZU64 1925 aaKnown RBP28.61■■■□□ 2.17
YIF1A-212ENST00000528575 RRBP1Q9P2E9 1410 aaKnown RBP28.59■■■□□ 2.17
YIF1A-212ENST00000528575 UBR1Q8IWV7 1749 aa28.57■■■□□ 2.16
YIF1A-212ENST00000528575 ARHGAP31Q2M1Z3 1444 aa28.56■■■□□ 2.16
YIF1A-212ENST00000528575 ROCK1Q13464 1354 aa28.55■■■□□ 2.16
YIF1A-212ENST00000528575 PPARGC1BQ86YN6 1023 aaKnown RBP28.55■■■□□ 2.16
YIF1A-212ENST00000528575 STRCP1A6NGW2 1772 aa28.55■■■□□ 2.16
YIF1A-212ENST00000528575 NPHP4O75161 1426 aaPredicted RBP28.54■■■□□ 2.16
YIF1A-212ENST00000528575 THEMISQ8N1K5 641 aaPredicted RBP28.54■■■□□ 2.16
YIF1A-212ENST00000528575 ALKQ9UM73 1620 aa28.52■■■□□ 2.16
YIF1A-212ENST00000528575 ANKLE2Q86XL3 938 aa28.52■■■□□ 2.16
YIF1A-212ENST00000528575 CHIC2Q9UKJ5 165 aa28.52■■■□□ 2.16
YIF1A-212ENST00000528575 IQGAP1P46940 1657 aa28.51■■■□□ 2.16
YIF1A-212ENST00000528575 CPS1P31327 1500 aa28.48■■■□□ 2.15
YIF1A-212ENST00000528575 LMTK2Q8IWU2 1503 aa28.48■■■□□ 2.15
YIF1A-212ENST00000528575 ARHGAP23Q9P227 1491 aa28.48■■■□□ 2.15
YIF1A-212ENST00000528575 UBAP1LF5GYI3 381 aa28.48■■■□□ 2.15
YIF1A-212ENST00000528575 SLIT1O75093 1534 aa28.45■■■□□ 2.15
YIF1A-212ENST00000528575 PIK3C2BO00750 1634 aa28.45■■■□□ 2.14
YIF1A-212ENST00000528575 ILDR2Q71H61 639 aa28.45■■■□□ 2.14
YIF1A-212ENST00000528575 LTKP29376 864 aa28.44■■■□□ 2.14
YIF1A-212ENST00000528575 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.44■■■□□ 2.14
YIF1A-212ENST00000528575 SYNMO15061 1565 aa28.44■■■□□ 2.14
YIF1A-212ENST00000528575 ANKRD50Q9ULJ7 1429 aa28.43■■■□□ 2.14
YIF1A-212ENST00000528575 KANK1Q14678 1352 aa28.42■■■□□ 2.14
YIF1A-212ENST00000528575 SCAF11Q99590 1463 aaKnown RBP28.4■■■□□ 2.14
YIF1A-212ENST00000528575 DISP3Q9P2K9 1392 aa28.39■■■□□ 2.14
YIF1A-212ENST00000528575 EFCAB6Q5THR3 1501 aa28.39■■■□□ 2.14
YIF1A-212ENST00000528575 NOS1P29475 1434 aa28.37■■■□□ 2.13
YIF1A-212ENST00000528575 LRRC7Q96NW7 1537 aa28.37■■■□□ 2.13
YIF1A-212ENST00000528575 IDI1Q13907 227 aa28.34■■■□□ 2.13
YIF1A-212ENST00000528575 KDM5AP29375 1690 aaKnown RBP28.32■■■□□ 2.12
YIF1A-212ENST00000528575 TMEM2Q9UHN6 1383 aa28.31■■■□□ 2.12
YIF1A-212ENST00000528575 ITGAEP38570 1179 aa28.3■■■□□ 2.12
YIF1A-212ENST00000528575 XIRP1Q702N8 1843 aaKnown RBP28.29■■■□□ 2.12
YIF1A-212ENST00000528575 HSPA1LP34931 641 aa28.29■■■□□ 2.12
YIF1A-212ENST00000528575 TXNDC2Q86VQ3 553 aa28.29■■■□□ 2.12
YIF1A-212ENST00000528575 UNC13BO14795 1591 aa28.27■■■□□ 2.12
YIF1A-212ENST00000528575 PIP4K2BP78356 416 aa28.26■■■□□ 2.11
YIF1A-212ENST00000528575 TET3O43151 1660 aa28.26■■■□□ 2.11
YIF1A-212ENST00000528575 ADGRB3O60242 1522 aa28.24■■■□□ 2.11
YIF1A-212ENST00000528575 RPRD2Q5VT52 1461 aaKnown RBP28.22■■■□□ 2.11
YIF1A-212ENST00000528575 HFM1A2PYH4 1435 aa28.21■■■□□ 2.11
YIF1A-212ENST00000528575 TOM1O60784 492 aa28.21■■■□□ 2.11
YIF1A-212ENST00000528575 MYO5BQ9ULV0 1848 aa28.2■■■□□ 2.1
YIF1A-212ENST00000528575 NAIPQ13075 1403 aa28.18■■■□□ 2.1
YIF1A-212ENST00000528575 GCC2Q8IWJ2 1684 aa28.18■■■□□ 2.1
YIF1A-212ENST00000528575 ZFYVE9O95405 1425 aa28.17■■■□□ 2.1
YIF1A-212ENST00000528575 SCAF1Q9H7N4 1312 aaKnown RBP28.17■■■□□ 2.1
YIF1A-212ENST00000528575 E9PCH4 1651 aa28.16■■■□□ 2.1
YIF1A-212ENST00000528575 IQGAP3Q86VI3 1631 aa28.15■■■□□ 2.1
YIF1A-212ENST00000528575 TMEM131LA2VDJ0 1609 aa28.14■■■□□ 2.1
YIF1A-212ENST00000528575 MED1Q15648 1581 aaPredicted RBP28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms