RNA–Protein interactions for RNA: ENST00000528284.1

PPFIA1-210, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 4

Gene PPFIA1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-210ENST00000528284 KDM5DQ9BY66 1539 aa26.97■■□□□ 1.91
PPFIA1-210ENST00000528284 FAM135AQ9P2D6 1515 aa26.97■■□□□ 1.91
PPFIA1-210ENST00000528284 FBXO31Q5XUX0 539 aaPredicted RBP26.96■■□□□ 1.91
PPFIA1-210ENST00000528284 MYO3AQ8NEV4 1616 aa26.96■■□□□ 1.91
PPFIA1-210ENST00000528284 NCKAP5LQ9HCH0 1330 aa26.95■■□□□ 1.91
PPFIA1-210ENST00000528284 CEP170BQ9Y4F5 1589 aaPredicted RBP26.94■■□□□ 1.9
PPFIA1-210ENST00000528284 PKD2Q13563 968 aa26.93■■□□□ 1.9
PPFIA1-210ENST00000528284 TNRQ92752 1358 aa26.93■■□□□ 1.9
PPFIA1-210ENST00000528284 PZPP20742 1482 aa26.92■■□□□ 1.9
PPFIA1-210ENST00000528284 PTPN23Q9H3S7 1636 aa26.91■■□□□ 1.9
PPFIA1-210ENST00000528284 ZNF142P52746 1687 aaPredicted RBP26.91■■□□□ 1.9
PPFIA1-210ENST00000528284 A2ML1A8K2U0 1454 aa26.9■■□□□ 1.9
PPFIA1-210ENST00000528284 ABCC5O15440 1437 aa26.9■■□□□ 1.9
PPFIA1-210ENST00000528284 PLA2R1Q13018 1463 aa26.89■■□□□ 1.9
PPFIA1-210ENST00000528284 FGD6Q6ZV73 1430 aa26.89■■□□□ 1.89
PPFIA1-210ENST00000528284 RRP7BPQ9NSQ0 103 aa26.88■■□□□ 1.89
PPFIA1-210ENST00000528284 DUOX2Q9NRD8 1548 aa26.87■■□□□ 1.89
PPFIA1-210ENST00000528284 EIF2AK4Q9P2K8 1649 aaKnown RBP26.86■■□□□ 1.89
PPFIA1-210ENST00000528284 KIF15Q9NS87 1388 aa26.85■■□□□ 1.89
PPFIA1-210ENST00000528284 RNF17Q9BXT8 1623 aaKnown RBP26.85■■□□□ 1.89
PPFIA1-210ENST00000528284 SHANK2Q9UPX8 1470 aa26.85■■□□□ 1.89
PPFIA1-210ENST00000528284 DAPK1P53355 1430 aa26.84■■□□□ 1.89
PPFIA1-210ENST00000528284 TCOF1Q13428 1488 aaKnown RBP26.84■■□□□ 1.89
PPFIA1-210ENST00000528284 DNMT1P26358 1616 aaKnown RBP26.83■■□□□ 1.88
PPFIA1-210ENST00000528284 ABCC3O15438 1527 aa26.82■■□□□ 1.88
PPFIA1-210ENST00000528284 CHIC2Q9UKJ5 165 aa26.82■■□□□ 1.88
PPFIA1-210ENST00000528284 THEMISQ8N1K5 641 aaPredicted RBP26.8■■□□□ 1.88
PPFIA1-210ENST00000528284 LTBP4Q8N2S1 1624 aa26.79■■□□□ 1.88
PPFIA1-210ENST00000528284 CROCC2H7BZ55 1655 aa26.79■■□□□ 1.88
PPFIA1-210ENST00000528284 FAM50AQ14320 339 aaKnown RBP26.78■■□□□ 1.88
PPFIA1-210ENST00000528284 ANKRD30AQ9BXX3 1397 aa26.78■■□□□ 1.88
PPFIA1-210ENST00000528284 ERBINQ96RT1 1412 aa26.78■■□□□ 1.88
PPFIA1-210ENST00000528284 NLRP1Q9C000 1473 aa26.78■■□□□ 1.88
PPFIA1-210ENST00000528284 ZC3H13Q5T200 1668 aaKnown RBP26.78■■□□□ 1.88
PPFIA1-210ENST00000528284 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.77■■□□□ 1.88
PPFIA1-210ENST00000528284 ZNF335Q9H4Z2 1342 aaPredicted RBP26.76■■□□□ 1.87
PPFIA1-210ENST00000528284 MROH1Q8NDA8 1641 aa26.76■■□□□ 1.87
PPFIA1-210ENST00000528284 ANKLE2Q86XL3 938 aa26.75■■□□□ 1.87
PPFIA1-210ENST00000528284 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.73■■□□□ 1.87
PPFIA1-210ENST00000528284 UGGT1Q9NYU2 1555 aa26.72■■□□□ 1.87
PPFIA1-210ENST00000528284 KANK1Q14678 1352 aa26.71■■□□□ 1.87
PPFIA1-210ENST00000528284 ERVK-7P63135 1459 aa26.71■■□□□ 1.87
PPFIA1-210ENST00000528284 SPATA31D1Q6ZQQ2 1576 aa26.71■■□□□ 1.87
PPFIA1-210ENST00000528284 CEP152O94986 1710 aa26.7■■□□□ 1.86
PPFIA1-210ENST00000528284 IQSEC2Q5JU85 1478 aa26.68■■□□□ 1.86
PPFIA1-210ENST00000528284 PRDM15P57071 1507 aaPredicted RBP26.67■■□□□ 1.86
PPFIA1-210ENST00000528284 ARHGAP31Q2M1Z3 1444 aa26.65■■□□□ 1.86
PPFIA1-210ENST00000528284 CFAP65Q6ZU64 1925 aaKnown RBP26.64■■□□□ 1.86
PPFIA1-210ENST00000528284 POLR1AO95602 1720 aaPredicted RBP26.64■■□□□ 1.85
PPFIA1-210ENST00000528284 NEURL4Q96JN8 1562 aa26.63■■□□□ 1.85
PPFIA1-210ENST00000528284 ADGRL2O95490 1459 aa26.62■■□□□ 1.85
PPFIA1-210ENST00000528284 DEPDC5O75140 1603 aa26.61■■□□□ 1.85
PPFIA1-210ENST00000528284 NPHP4O75161 1426 aaPredicted RBP26.6■■□□□ 1.85
PPFIA1-210ENST00000528284 UBAP1LF5GYI3 381 aa26.58■■□□□ 1.85
PPFIA1-210ENST00000528284 MED14O60244 1454 aa26.57■■□□□ 1.84
PPFIA1-210ENST00000528284 PPARGC1BQ86YN6 1023 aaKnown RBP26.56■■□□□ 1.84
PPFIA1-210ENST00000528284 ANKRD50Q9ULJ7 1429 aa26.56■■□□□ 1.84
PPFIA1-210ENST00000528284 STAG3Q9UJ98 1225 aa26.55■■□□□ 1.84
PPFIA1-210ENST00000528284 LMTK2Q8IWU2 1503 aa26.55■■□□□ 1.84
PPFIA1-210ENST00000528284 TXNDC2Q86VQ3 553 aa26.52■■□□□ 1.84
PPFIA1-210ENST00000528284 VWDEQ8N2E2 1590 aa26.52■■□□□ 1.84
PPFIA1-210ENST00000528284 UBR1Q8IWV7 1749 aa26.51■■□□□ 1.83
PPFIA1-210ENST00000528284 CPS1P31327 1500 aa26.51■■□□□ 1.83
PPFIA1-210ENST00000528284 EID1Q9Y6B2 187 aa26.5■■□□□ 1.83
PPFIA1-210ENST00000528284 IDI1Q13907 227 aa26.49■■□□□ 1.83
PPFIA1-210ENST00000528284 IQGAP1P46940 1657 aa26.48■■□□□ 1.83
PPFIA1-210ENST00000528284 LTKP29376 864 aa26.48■■□□□ 1.83
PPFIA1-210ENST00000528284 ITGAEP38570 1179 aa26.48■■□□□ 1.83
PPFIA1-210ENST00000528284 SCAF11Q99590 1463 aaKnown RBP26.48■■□□□ 1.83
PPFIA1-210ENST00000528284 ARHGAP23Q9P227 1491 aa26.45■■□□□ 1.82
PPFIA1-210ENST00000528284 ROCK1Q13464 1354 aa26.45■■□□□ 1.82
PPFIA1-210ENST00000528284 SLIT1O75093 1534 aa26.44■■□□□ 1.82
PPFIA1-210ENST00000528284 EFCAB6Q5THR3 1501 aa26.44■■□□□ 1.82
PPFIA1-210ENST00000528284 PIK3C2BO00750 1634 aa26.44■■□□□ 1.82
PPFIA1-210ENST00000528284 TOM1O60784 492 aa26.44■■□□□ 1.82
PPFIA1-210ENST00000528284 NOS1P29475 1434 aa26.43■■□□□ 1.82
PPFIA1-210ENST00000528284 SLC52A1Q9NWF4 448 aa26.43■■□□□ 1.82
PPFIA1-210ENST00000528284 TMEM2Q9UHN6 1383 aa26.42■■□□□ 1.82
PPFIA1-210ENST00000528284 SCAF1Q9H7N4 1312 aaKnown RBP26.4■■□□□ 1.82
PPFIA1-210ENST00000528284 RPRD2Q5VT52 1461 aaKnown RBP26.39■■□□□ 1.82
PPFIA1-210ENST00000528284 SYNMO15061 1565 aa26.38■■□□□ 1.81
PPFIA1-210ENST00000528284 PIP4K2BP78356 416 aa26.38■■□□□ 1.81
PPFIA1-210ENST00000528284 DISP3Q9P2K9 1392 aa26.35■■□□□ 1.81
PPFIA1-210ENST00000528284 TET3O43151 1660 aa26.34■■□□□ 1.81
PPFIA1-210ENST00000528284 KDM5AP29375 1690 aaKnown RBP26.34■■□□□ 1.81
PPFIA1-210ENST00000528284 UNC13BO14795 1591 aa26.33■■□□□ 1.81
PPFIA1-210ENST00000528284 NUP155O75694 1391 aa26.32■■□□□ 1.8
PPFIA1-210ENST00000528284 LRRC7Q96NW7 1537 aa26.31■■□□□ 1.8
PPFIA1-210ENST00000528284 ADGRB3O60242 1522 aa26.3■■□□□ 1.8
PPFIA1-210ENST00000528284 BCANQ96GW7 911 aa26.3■■□□□ 1.8
PPFIA1-210ENST00000528284 STRCP1A6NGW2 1772 aa26.29■■□□□ 1.8
PPFIA1-210ENST00000528284 GCC2Q8IWJ2 1684 aa26.28■■□□□ 1.8
PPFIA1-210ENST00000528284 HDGFP51858 240 aaKnown RBP26.28■■□□□ 1.8
PPFIA1-210ENST00000528284 CHGAP10645 457 aaKnown RBP26.27■■□□□ 1.8
PPFIA1-210ENST00000528284 HSPA1LP34931 641 aa26.26■■□□□ 1.79
PPFIA1-210ENST00000528284 SLC26A8Q96RN1 970 aa26.26■■□□□ 1.79
PPFIA1-210ENST00000528284 IQGAP3Q86VI3 1631 aa26.24■■□□□ 1.79
PPFIA1-210ENST00000528284 RRBP1Q9P2E9 1410 aaKnown RBP26.23■■□□□ 1.79
PPFIA1-210ENST00000528284 PPP1R15AO75807 674 aaPredicted RBP26.23■■□□□ 1.79
PPFIA1-210ENST00000528284 KCNA6P17658 529 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms