RNA–Protein interactions for RNA: ENST00000525155.5

CHKA-203, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 1,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-203ENST00000525155 MAP3K1Q13233 1512 aa19.07■□□□□ 0.64
CHKA-203ENST00000525155 APLP2Q06481 763 aa19.06■□□□□ 0.64
CHKA-203ENST00000525155 ARHGEF5Q12774 1597 aa19.06■□□□□ 0.64
CHKA-203ENST00000525155 PLA2R1Q13018 1463 aa19.05■□□□□ 0.64
CHKA-203ENST00000525155 TNRQ92752 1358 aa19.05■□□□□ 0.64
CHKA-203ENST00000525155 CEP170BQ9Y4F5 1589 aaPredicted RBP19.04■□□□□ 0.64
CHKA-203ENST00000525155 A2ML1A8K2U0 1454 aa19.03■□□□□ 0.64
CHKA-203ENST00000525155 MYOM3Q5VTT5 1437 aa19.03■□□□□ 0.64
CHKA-203ENST00000525155 MIA2Q96PC5 1412 aa19.03■□□□□ 0.64
CHKA-203ENST00000525155 MYO3AQ8NEV4 1616 aa19.03■□□□□ 0.64
CHKA-203ENST00000525155 PZPP20742 1482 aa19.03■□□□□ 0.64
CHKA-203ENST00000525155 DNMT1P26358 1616 aaKnown RBP19■□□□□ 0.63
CHKA-203ENST00000525155 KDM5DQ9BY66 1539 aa18.99■□□□□ 0.63
CHKA-203ENST00000525155 ABCC5O15440 1437 aa18.99■□□□□ 0.63
CHKA-203ENST00000525155 ZNF142P52746 1687 aaPredicted RBP18.98■□□□□ 0.63
CHKA-203ENST00000525155 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.98■□□□□ 0.63
CHKA-203ENST00000525155 RRP7BPQ9NSQ0 103 aa18.97■□□□□ 0.63
CHKA-203ENST00000525155 MAST1Q9Y2H9 1570 aa18.97■□□□□ 0.63
CHKA-203ENST00000525155 THEMISQ8N1K5 641 aaPredicted RBP18.95■□□□□ 0.62
CHKA-203ENST00000525155 ILDR2Q71H61 639 aa18.94■□□□□ 0.62
CHKA-203ENST00000525155 ANKLE2Q86XL3 938 aa18.94■□□□□ 0.62
CHKA-203ENST00000525155 IQSEC2Q5JU85 1478 aa18.94■□□□□ 0.62
CHKA-203ENST00000525155 ABCC3O15438 1527 aa18.94■□□□□ 0.62
CHKA-203ENST00000525155 FAM135AQ9P2D6 1515 aa18.93■□□□□ 0.62
CHKA-203ENST00000525155 UBAP1LF5GYI3 381 aa18.92■□□□□ 0.62
CHKA-203ENST00000525155 MROH1Q8NDA8 1641 aa18.92■□□□□ 0.62
CHKA-203ENST00000525155 NEURL4Q96JN8 1562 aa18.91■□□□□ 0.62
CHKA-203ENST00000525155 KIF15Q9NS87 1388 aa18.91■□□□□ 0.62
CHKA-203ENST00000525155 RNF17Q9BXT8 1623 aaKnown RBP18.9■□□□□ 0.62
CHKA-203ENST00000525155 CHIC2Q9UKJ5 165 aa18.9■□□□□ 0.62
CHKA-203ENST00000525155 NLRP1Q9C000 1473 aa18.9■□□□□ 0.62
CHKA-203ENST00000525155 FGD6Q6ZV73 1430 aa18.88■□□□□ 0.61
CHKA-203ENST00000525155 ERVK-7P63135 1459 aa18.88■□□□□ 0.61
CHKA-203ENST00000525155 LTKP29376 864 aa18.87■□□□□ 0.61
CHKA-203ENST00000525155 DAPK1P53355 1430 aa18.87■□□□□ 0.61
CHKA-203ENST00000525155 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.87■□□□□ 0.61
CHKA-203ENST00000525155 DUOX2Q9NRD8 1548 aa18.87■□□□□ 0.61
CHKA-203ENST00000525155 SPATA31D1Q6ZQQ2 1576 aa18.86■□□□□ 0.61
CHKA-203ENST00000525155 UGGT1Q9NYU2 1555 aa18.86■□□□□ 0.61
CHKA-203ENST00000525155 MED14O60244 1454 aa18.86■□□□□ 0.61
CHKA-203ENST00000525155 DISP3Q9P2K9 1392 aa18.86■□□□□ 0.61
CHKA-203ENST00000525155 SHANK2Q9UPX8 1470 aa18.85■□□□□ 0.61
CHKA-203ENST00000525155 NPHP4O75161 1426 aaPredicted RBP18.84■□□□□ 0.61
CHKA-203ENST00000525155 PTPN23Q9H3S7 1636 aa18.84■□□□□ 0.61
CHKA-203ENST00000525155 ARHGAP31Q2M1Z3 1444 aa18.83■□□□□ 0.6
CHKA-203ENST00000525155 VWDEQ8N2E2 1590 aa18.82■□□□□ 0.6
CHKA-203ENST00000525155 EIF2AK4Q9P2K8 1649 aaKnown RBP18.82■□□□□ 0.6
CHKA-203ENST00000525155 ERBINQ96RT1 1412 aa18.81■□□□□ 0.6
CHKA-203ENST00000525155 IDI1Q13907 227 aa18.79■□□□□ 0.6
CHKA-203ENST00000525155 HSPA1LP34931 641 aa18.78■□□□□ 0.6
CHKA-203ENST00000525155 PIP4K2BP78356 416 aa18.78■□□□□ 0.6
CHKA-203ENST00000525155 TXNDC2Q86VQ3 553 aa18.78■□□□□ 0.6
CHKA-203ENST00000525155 PRDM15P57071 1507 aaPredicted RBP18.77■□□□□ 0.6
CHKA-203ENST00000525155 ANKRD30AQ9BXX3 1397 aa18.77■□□□□ 0.6
CHKA-203ENST00000525155 DEPDC5O75140 1603 aa18.76■□□□□ 0.59
CHKA-203ENST00000525155 FAM50AQ14320 339 aaKnown RBP18.76■□□□□ 0.59
CHKA-203ENST00000525155 ARHGAP23Q9P227 1491 aa18.76■□□□□ 0.59
CHKA-203ENST00000525155 CPS1P31327 1500 aa18.75■□□□□ 0.59
CHKA-203ENST00000525155 CEP152O94986 1710 aa18.75■□□□□ 0.59
CHKA-203ENST00000525155 ZC3H13Q5T200 1668 aaKnown RBP18.75■□□□□ 0.59
CHKA-203ENST00000525155 ALKQ9UM73 1620 aa18.74■□□□□ 0.59
CHKA-203ENST00000525155 TOM1O60784 492 aa18.74■□□□□ 0.59
CHKA-203ENST00000525155 POLR1AO95602 1720 aaPredicted RBP18.74■□□□□ 0.59
CHKA-203ENST00000525155 CFAP65Q6ZU64 1925 aaKnown RBP18.73■□□□□ 0.59
CHKA-203ENST00000525155 CROCC2H7BZ55 1655 aa18.72■□□□□ 0.59
CHKA-203ENST00000525155 ADGRL2O95490 1459 aa18.71■□□□□ 0.59
CHKA-203ENST00000525155 TMEM2Q9UHN6 1383 aa18.71■□□□□ 0.59
CHKA-203ENST00000525155 SLIT1O75093 1534 aa18.71■□□□□ 0.59
CHKA-203ENST00000525155 LMTK2Q8IWU2 1503 aa18.71■□□□□ 0.59
CHKA-203ENST00000525155 LRRC7Q96NW7 1537 aa18.71■□□□□ 0.59
CHKA-203ENST00000525155 SCAF1Q9H7N4 1312 aaKnown RBP18.71■□□□□ 0.59
CHKA-203ENST00000525155 SCAF11Q99590 1463 aaKnown RBP18.71■□□□□ 0.59
CHKA-203ENST00000525155 NOS1P29475 1434 aa18.7■□□□□ 0.58
CHKA-203ENST00000525155 UBR1Q8IWV7 1749 aa18.7■□□□□ 0.58
CHKA-203ENST00000525155 KANK1Q14678 1352 aa18.69■□□□□ 0.58
CHKA-203ENST00000525155 STRCP1A6NGW2 1772 aa18.69■□□□□ 0.58
CHKA-203ENST00000525155 SOCS7O14512 581 aa18.69■□□□□ 0.58
CHKA-203ENST00000525155 IQGAP1P46940 1657 aa18.68■□□□□ 0.58
CHKA-203ENST00000525155 ANKRD50Q9ULJ7 1429 aa18.67■□□□□ 0.58
CHKA-203ENST00000525155 PPARGC1BQ86YN6 1023 aaKnown RBP18.67■□□□□ 0.58
CHKA-203ENST00000525155 EID1Q9Y6B2 187 aa18.66■□□□□ 0.58
CHKA-203ENST00000525155 SLC26A8Q96RN1 970 aa18.65■□□□□ 0.58
CHKA-203ENST00000525155 STAG3Q9UJ98 1225 aa18.65■□□□□ 0.58
CHKA-203ENST00000525155 SYNMO15061 1565 aa18.64■□□□□ 0.58
CHKA-203ENST00000525155 PIK3C2BO00750 1634 aa18.64■□□□□ 0.57
CHKA-203ENST00000525155 SLC52A1Q9NWF4 448 aa18.64■□□□□ 0.57
CHKA-203ENST00000525155 RBM33Q96EV2 1170 aaKnown RBP18.62■□□□□ 0.57
CHKA-203ENST00000525155 EFCAB6Q5THR3 1501 aa18.6■□□□□ 0.57
CHKA-203ENST00000525155 KCNA6P17658 529 aa18.6■□□□□ 0.57
CHKA-203ENST00000525155 SENP3Q9H4L4 574 aaPredicted RBP18.6■□□□□ 0.57
CHKA-203ENST00000525155 TET3O43151 1660 aa18.6■□□□□ 0.57
CHKA-203ENST00000525155 ITGAEP38570 1179 aa18.56■□□□□ 0.56
CHKA-203ENST00000525155 TMEM94Q12767 1356 aa18.55■□□□□ 0.56
CHKA-203ENST00000525155 ROCK1Q13464 1354 aa18.55■□□□□ 0.56
CHKA-203ENST00000525155 ZFYVE9O95405 1425 aa18.55■□□□□ 0.56
CHKA-203ENST00000525155 RPRD2Q5VT52 1461 aaKnown RBP18.53■□□□□ 0.56
CHKA-203ENST00000525155 PROSER2Q86WR7 435 aaPredicted RBP18.53■□□□□ 0.56
CHKA-203ENST00000525155 NUTM2DQ5VT03 806 aaPredicted RBP18.52■□□□□ 0.56
CHKA-203ENST00000525155 ADGRB3O60242 1522 aa18.52■□□□□ 0.56
CHKA-203ENST00000525155 RIMS2Q9UQ26 1411 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms