RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 LTBP4Q8N2S1 1624 aa18.71■□□□□ 0.58
CLNS1A-202ENST00000525064 MIA2Q96PC5 1412 aa18.7■□□□□ 0.58
CLNS1A-202ENST00000525064 PPP6R1Q9UPN7 881 aa18.7■□□□□ 0.58
CLNS1A-202ENST00000525064 DNMT1P26358 1616 aaKnown RBP18.7■□□□□ 0.58
CLNS1A-202ENST00000525064 FAM135AQ9P2D6 1515 aa18.69■□□□□ 0.58
CLNS1A-202ENST00000525064 MROH1Q8NDA8 1641 aa18.68■□□□□ 0.58
CLNS1A-202ENST00000525064 PTPN23Q9H3S7 1636 aa18.68■□□□□ 0.58
CLNS1A-202ENST00000525064 EIF2AK4Q9P2K8 1649 aaKnown RBP18.68■□□□□ 0.58
CLNS1A-202ENST00000525064 PZPP20742 1482 aa18.68■□□□□ 0.58
CLNS1A-202ENST00000525064 CEP152O94986 1710 aa18.68■□□□□ 0.58
CLNS1A-202ENST00000525064 NCKAP5LQ9HCH0 1330 aa18.68■□□□□ 0.58
CLNS1A-202ENST00000525064 PLA2R1Q13018 1463 aa18.67■□□□□ 0.58
CLNS1A-202ENST00000525064 TSPY4P0CV99 314 aa18.67■□□□□ 0.58
CLNS1A-202ENST00000525064 TSPY10P0CW01 314 aa18.67■□□□□ 0.58
CLNS1A-202ENST00000525064 A2ML1A8K2U0 1454 aa18.66■□□□□ 0.58
CLNS1A-202ENST00000525064 TCOF1Q13428 1488 aaKnown RBP18.66■□□□□ 0.58
CLNS1A-202ENST00000525064 SENP3Q9H4L4 574 aaPredicted RBP18.66■□□□□ 0.58
CLNS1A-202ENST00000525064 POLR1AO95602 1720 aaPredicted RBP18.66■□□□□ 0.58
CLNS1A-202ENST00000525064 FBXO31Q5XUX0 539 aaPredicted RBP18.65■□□□□ 0.58
CLNS1A-202ENST00000525064 ZC3H13Q5T200 1668 aaKnown RBP18.65■□□□□ 0.58
CLNS1A-202ENST00000525064 CFAP65Q6ZU64 1925 aaKnown RBP18.64■□□□□ 0.58
CLNS1A-202ENST00000525064 TNRQ92752 1358 aa18.64■□□□□ 0.57
CLNS1A-202ENST00000525064 ABCC3O15438 1527 aa18.64■□□□□ 0.57
CLNS1A-202ENST00000525064 WASHC2CQ9Y4E1 1318 aa18.62■□□□□ 0.57
CLNS1A-202ENST00000525064 NEURL4Q96JN8 1562 aa18.61■□□□□ 0.57
CLNS1A-202ENST00000525064 ABCC5O15440 1437 aa18.61■□□□□ 0.57
CLNS1A-202ENST00000525064 DUOX2Q9NRD8 1548 aa18.6■□□□□ 0.57
CLNS1A-202ENST00000525064 SHANK2Q9UPX8 1470 aa18.6■□□□□ 0.57
CLNS1A-202ENST00000525064 FGD6Q6ZV73 1430 aa18.59■□□□□ 0.57
CLNS1A-202ENST00000525064 ZNF335Q9H4Z2 1342 aaPredicted RBP18.58■□□□□ 0.57
CLNS1A-202ENST00000525064 SPATA31D1Q6ZQQ2 1576 aa18.58■□□□□ 0.56
CLNS1A-202ENST00000525064 DAPK1P53355 1430 aa18.57■□□□□ 0.56
CLNS1A-202ENST00000525064 PKD2Q13563 968 aa18.57■□□□□ 0.56
CLNS1A-202ENST00000525064 PRDM15P57071 1507 aaPredicted RBP18.56■□□□□ 0.56
CLNS1A-202ENST00000525064 APLP2Q06481 763 aa18.56■□□□□ 0.56
CLNS1A-202ENST00000525064 KIF15Q9NS87 1388 aa18.55■□□□□ 0.56
CLNS1A-202ENST00000525064 ERVK-7P63135 1459 aa18.55■□□□□ 0.56
CLNS1A-202ENST00000525064 IQSEC2Q5JU85 1478 aa18.55■□□□□ 0.56
CLNS1A-202ENST00000525064 DEPDC5O75140 1603 aa18.55■□□□□ 0.56
CLNS1A-202ENST00000525064 NLRP1Q9C000 1473 aa18.54■□□□□ 0.56
CLNS1A-202ENST00000525064 UGGT1Q9NYU2 1555 aa18.54■□□□□ 0.56
CLNS1A-202ENST00000525064 ERBINQ96RT1 1412 aa18.52■□□□□ 0.56
CLNS1A-202ENST00000525064 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.52■□□□□ 0.55
CLNS1A-202ENST00000525064 RRP7BPQ9NSQ0 103 aa18.51■□□□□ 0.55
CLNS1A-202ENST00000525064 UBR1Q8IWV7 1749 aa18.51■□□□□ 0.55
CLNS1A-202ENST00000525064 IQGAP1P46940 1657 aa18.47■□□□□ 0.55
CLNS1A-202ENST00000525064 CHIC2Q9UKJ5 165 aa18.47■□□□□ 0.55
CLNS1A-202ENST00000525064 VWDEQ8N2E2 1590 aa18.47■□□□□ 0.55
CLNS1A-202ENST00000525064 STRCP1A6NGW2 1772 aa18.45■□□□□ 0.54
CLNS1A-202ENST00000525064 PHF23Q9BUL5 403 aaPredicted RBP18.45■□□□□ 0.54
CLNS1A-202ENST00000525064 MED14O60244 1454 aa18.45■□□□□ 0.54
CLNS1A-202ENST00000525064 ADGRL2O95490 1459 aa18.45■□□□□ 0.54
CLNS1A-202ENST00000525064 NPHP4O75161 1426 aaPredicted RBP18.44■□□□□ 0.54
CLNS1A-202ENST00000525064 ARHGAP31Q2M1Z3 1444 aa18.44■□□□□ 0.54
CLNS1A-202ENST00000525064 THEMISQ8N1K5 641 aaPredicted RBP18.44■□□□□ 0.54
CLNS1A-202ENST00000525064 PIK3C2BO00750 1634 aa18.44■□□□□ 0.54
CLNS1A-202ENST00000525064 ANKLE2Q86XL3 938 aa18.43■□□□□ 0.54
CLNS1A-202ENST00000525064 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.43■□□□□ 0.542e-7■■■□□ 16.1
CLNS1A-202ENST00000525064 ANKRD30AQ9BXX3 1397 aa18.42■□□□□ 0.54
CLNS1A-202ENST00000525064 LMTK2Q8IWU2 1503 aa18.42■□□□□ 0.54
CLNS1A-202ENST00000525064 CPS1P31327 1500 aa18.4■□□□□ 0.54
CLNS1A-202ENST00000525064 SYNMO15061 1565 aa18.39■□□□□ 0.53
CLNS1A-202ENST00000525064 FAM50AQ14320 339 aaKnown RBP18.39■□□□□ 0.53
CLNS1A-202ENST00000525064 EFCAB6Q5THR3 1501 aa18.39■□□□□ 0.53
CLNS1A-202ENST00000525064 UBAP1LF5GYI3 381 aa18.38■□□□□ 0.53
CLNS1A-202ENST00000525064 ARHGAP23Q9P227 1491 aa18.38■□□□□ 0.53
CLNS1A-202ENST00000525064 KANK1Q14678 1352 aa18.37■□□□□ 0.53
CLNS1A-202ENST00000525064 SLIT1O75093 1534 aa18.37■□□□□ 0.53
CLNS1A-202ENST00000525064 ALKQ9UM73 1620 aa18.35■□□□□ 0.53
CLNS1A-202ENST00000525064 SCAF11Q99590 1463 aaKnown RBP18.35■□□□□ 0.53
CLNS1A-202ENST00000525064 KDM5AP29375 1690 aaKnown RBP18.34■□□□□ 0.53
CLNS1A-202ENST00000525064 MYO5BQ9ULV0 1848 aa18.34■□□□□ 0.53
CLNS1A-202ENST00000525064 ANKRD50Q9ULJ7 1429 aa18.33■□□□□ 0.53
CLNS1A-202ENST00000525064 TET3O43151 1660 aa18.32■□□□□ 0.52
CLNS1A-202ENST00000525064 LTKP29376 864 aa18.32■□□□□ 0.52
CLNS1A-202ENST00000525064 UNC13BO14795 1591 aa18.32■□□□□ 0.52
CLNS1A-202ENST00000525064 XIRP1Q702N8 1843 aaKnown RBP18.32■□□□□ 0.52
CLNS1A-202ENST00000525064 NOS1P29475 1434 aa18.32■□□□□ 0.52
CLNS1A-202ENST00000525064 GCC2Q8IWJ2 1684 aa18.31■□□□□ 0.52
CLNS1A-202ENST00000525064 DISP3Q9P2K9 1392 aa18.31■□□□□ 0.52
CLNS1A-202ENST00000525064 ADGRB3O60242 1522 aa18.29■□□□□ 0.52
CLNS1A-202ENST00000525064 LRRC7Q96NW7 1537 aa18.29■□□□□ 0.52
CLNS1A-202ENST00000525064 PPARGC1BQ86YN6 1023 aaKnown RBP18.28■□□□□ 0.52
CLNS1A-202ENST00000525064 TMEM2Q9UHN6 1383 aa18.28■□□□□ 0.52
CLNS1A-202ENST00000525064 IDI1Q13907 227 aa18.27■□□□□ 0.52
CLNS1A-202ENST00000525064 TXNDC2Q86VQ3 553 aa18.27■□□□□ 0.52
CLNS1A-202ENST00000525064 E9PCH4 1651 aa18.27■□□□□ 0.52
CLNS1A-202ENST00000525064 ILDR2Q71H61 639 aa18.26■□□□□ 0.51
CLNS1A-202ENST00000525064 PIP4K2BP78356 416 aa18.25■□□□□ 0.51
CLNS1A-202ENST00000525064 SCAF1Q9H7N4 1312 aaKnown RBP18.24■□□□□ 0.51
CLNS1A-202ENST00000525064 IQGAP3Q86VI3 1631 aa18.24■□□□□ 0.51
CLNS1A-202ENST00000525064 RPRD2Q5VT52 1461 aaKnown RBP18.24■□□□□ 0.51
CLNS1A-202ENST00000525064 STAG3Q9UJ98 1225 aa18.23■□□□□ 0.51
CLNS1A-202ENST00000525064 ROCK1Q13464 1354 aa18.22■□□□□ 0.51
CLNS1A-202ENST00000525064 TOM1O60784 492 aa18.22■□□□□ 0.51
CLNS1A-202ENST00000525064 TMEM131LA2VDJ0 1609 aa18.22■□□□□ 0.51
CLNS1A-202ENST00000525064 HSPA1LP34931 641 aa18.21■□□□□ 0.51
CLNS1A-202ENST00000525064 EID1Q9Y6B2 187 aa18.21■□□□□ 0.51
CLNS1A-202ENST00000525064 ITGAEP38570 1179 aa18.19■□□□□ 0.5
CLNS1A-202ENST00000525064 MED1Q15648 1581 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms