RNA–Protein interactions for RNA: ENST00000524815.5

PACS1-203, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4 BASIC

Gene PACS1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-203ENST00000524815 RTEL1-TNFRSF6BF6WH68 1400 aa24.19■■□□□ 1.46
PACS1-203ENST00000524815 TOM1O60784 492 aa24.19■■□□□ 1.46
PACS1-203ENST00000524815 MED1Q15648 1581 aaPredicted RBP24.19■■□□□ 1.46
PACS1-203ENST00000524815 CPS1P31327 1500 aa24.19■■□□□ 1.46
PACS1-203ENST00000524815 SHANK2Q9UPX8 1470 aa24.19■■□□□ 1.46
PACS1-203ENST00000524815 TNRQ92752 1358 aa24.18■■□□□ 1.46
PACS1-203ENST00000524815 TIAM1Q13009 1591 aa24.17■■□□□ 1.46
PACS1-203ENST00000524815 POLR1AO95602 1720 aaPredicted RBP24.15■■□□□ 1.46
PACS1-203ENST00000524815 KIF3BO15066 747 aa24.14■■□□□ 1.45
PACS1-203ENST00000524815 PZPP20742 1482 aa24.13■■□□□ 1.45
PACS1-203ENST00000524815 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.12■■□□□ 1.45
PACS1-203ENST00000524815 ANKLE2Q86XL3 938 aa24.11■■□□□ 1.45
PACS1-203ENST00000524815 VWDEQ8N2E2 1590 aa24.11■■□□□ 1.45
PACS1-203ENST00000524815 ALKQ9UM73 1620 aa24.1■■□□□ 1.45
PACS1-203ENST00000524815 KDM5DQ9BY66 1539 aa24.1■■□□□ 1.45
PACS1-203ENST00000524815 MIA2Q96PC5 1412 aa24.09■■□□□ 1.45
PACS1-203ENST00000524815 WASHC2CQ9Y4E1 1318 aa24.09■■□□□ 1.45
PACS1-203ENST00000524815 THEMISQ8N1K5 641 aaPredicted RBP24.08■■□□□ 1.45
PACS1-203ENST00000524815 FAM135AQ9P2D6 1515 aa24.07■■□□□ 1.44
PACS1-203ENST00000524815 CEP162Q5TB80 1403 aa24.07■■□□□ 1.44
PACS1-203ENST00000524815 EHBP1L1Q8N3D4 1523 aa24.06■■□□□ 1.44
PACS1-203ENST00000524815 NPHP4O75161 1426 aaPredicted RBP24.06■■□□□ 1.44
PACS1-203ENST00000524815 MED14O60244 1454 aa24.06■■□□□ 1.44
PACS1-203ENST00000524815 CCDC141Q6ZP82 1450 aa24.04■■□□□ 1.44
PACS1-203ENST00000524815 NLRP1Q9C000 1473 aa24.04■■□□□ 1.44
PACS1-203ENST00000524815 UGGT1Q9NYU2 1555 aa24.03■■□□□ 1.44
PACS1-203ENST00000524815 DEPDC5O75140 1603 aa24.02■■□□□ 1.44
PACS1-203ENST00000524815 RSPH4AQ5TD94 716 aa24.01■■□□□ 1.43
PACS1-203ENST00000524815 PHF23Q9BUL5 403 aaPredicted RBP24■■□□□ 1.43
PACS1-203ENST00000524815 CAMSAP2Q08AD1 1489 aa24■■□□□ 1.43
PACS1-203ENST00000524815 LRRC7Q96NW7 1537 aa23.97■■□□□ 1.43
PACS1-203ENST00000524815 STRCP1A6NGW2 1772 aa23.96■■□□□ 1.43
PACS1-203ENST00000524815 NCOA2Q15596 1464 aa23.96■■□□□ 1.43
PACS1-203ENST00000524815 IQGAP1P46940 1657 aa23.95■■□□□ 1.43
PACS1-203ENST00000524815 SENP3Q9H4L4 574 aaPredicted RBP23.94■■□□□ 1.42
PACS1-203ENST00000524815 TSPY4P0CV99 314 aa23.91■■□□□ 1.42
PACS1-203ENST00000524815 TSPY10P0CW01 314 aa23.91■■□□□ 1.42
PACS1-203ENST00000524815 ARHGEF5Q12774 1597 aa23.91■■□□□ 1.42
PACS1-203ENST00000524815 ABCC3O15438 1527 aa23.9■■□□□ 1.42
PACS1-203ENST00000524815 RNF17Q9BXT8 1623 aaKnown RBP23.88■■□□□ 1.41
PACS1-203ENST00000524815 ERVK-7P63135 1459 aa23.87■■□□□ 1.41
PACS1-203ENST00000524815 SYNMO15061 1565 aa23.86■■□□□ 1.41
PACS1-203ENST00000524815 RGS17Q9UGC6 210 aaPredicted RBP23.86■■□□□ 1.41
PACS1-203ENST00000524815 ZC3H13Q5T200 1668 aaKnown RBP23.85■■□□□ 1.41
PACS1-203ENST00000524815 LTKP29376 864 aa23.82■■□□□ 1.4
PACS1-203ENST00000524815 MROH1Q8NDA8 1641 aa23.81■■□□□ 1.4
PACS1-203ENST00000524815 UBR1Q8IWV7 1749 aa23.81■■□□□ 1.4
PACS1-203ENST00000524815 SCAF11Q99590 1463 aaKnown RBP23.81■■□□□ 1.4
PACS1-203ENST00000524815 MAST1Q9Y2H9 1570 aa23.8■■□□□ 1.4
PACS1-203ENST00000524815 EIF2AK4Q9P2K8 1649 aaKnown RBP23.78■■□□□ 1.4
PACS1-203ENST00000524815 TXNDC2Q86VQ3 553 aa23.78■■□□□ 1.4
PACS1-203ENST00000524815 ARHGAP23Q9P227 1491 aa23.78■■□□□ 1.4
PACS1-203ENST00000524815 SLIT1O75093 1534 aa23.76■■□□□ 1.39
PACS1-203ENST00000524815 CFAP65Q6ZU64 1925 aaKnown RBP23.75■■□□□ 1.39
PACS1-203ENST00000524815 CEP152O94986 1710 aa23.75■■□□□ 1.39
PACS1-203ENST00000524815 XIRP1Q702N8 1843 aaKnown RBP23.75■■□□□ 1.39
PACS1-203ENST00000524815 LRRC9Q6ZRR7 1453 aa23.72■■□□□ 1.39
PACS1-203ENST00000524815 FAM135BQ49AJ0 1406 aa23.71■■□□□ 1.39
PACS1-203ENST00000524815 ARHGAP31Q2M1Z3 1444 aa23.7■■□□□ 1.38
PACS1-203ENST00000524815 DUOX2Q9NRD8 1548 aa23.69■■□□□ 1.38
PACS1-203ENST00000524815 POTEAQ6S8J7 498 aa23.68■■□□□ 1.38
PACS1-203ENST00000524815 EID1Q9Y6B2 187 aa23.68■■□□□ 1.38
PACS1-203ENST00000524815 KANK4Q5T7N3 995 aaPredicted RBP23.66■■□□□ 1.38
PACS1-203ENST00000524815 TMEM2Q9UHN6 1383 aa23.65■■□□□ 1.38
PACS1-203ENST00000524815 TMEM94Q12767 1356 aa23.65■■□□□ 1.38
PACS1-203ENST00000524815 PRDM15P57071 1507 aaPredicted RBP23.64■■□□□ 1.38
PACS1-203ENST00000524815 MYOM3Q5VTT5 1437 aa23.64■■□□□ 1.37
PACS1-203ENST00000524815 PIK3C2BO00750 1634 aa23.63■■□□□ 1.37
PACS1-203ENST00000524815 KCNA6P17658 529 aa23.62■■□□□ 1.37
PACS1-203ENST00000524815 KIF15Q9NS87 1388 aa23.62■■□□□ 1.37
PACS1-203ENST00000524815 VPS8Q8N3P4 1428 aa23.6■■□□□ 1.37
PACS1-203ENST00000524815 RBM33Q96EV2 1170 aaKnown RBP23.6■■□□□ 1.37
PACS1-203ENST00000524815 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.6■■□□□ 1.37
PACS1-203ENST00000524815 RRP7BPQ9NSQ0 103 aa23.6■■□□□ 1.37
PACS1-203ENST00000524815 ERBINQ96RT1 1412 aa23.59■■□□□ 1.37
PACS1-203ENST00000524815 IDI1Q13907 227 aa23.59■■□□□ 1.37
PACS1-203ENST00000524815 MAP3K1Q13233 1512 aa23.59■■□□□ 1.37
PACS1-203ENST00000524815 STAG3Q9UJ98 1225 aa23.58■■□□□ 1.37
PACS1-203ENST00000524815 ABCC5O15440 1437 aa23.58■■□□□ 1.36
PACS1-203ENST00000524815 TET3O43151 1660 aa23.57■■□□□ 1.36
PACS1-203ENST00000524815 ROBO1Q9Y6N7 1651 aa23.57■■□□□ 1.36
PACS1-203ENST00000524815 PROSER2Q86WR7 435 aaPredicted RBP23.57■■□□□ 1.36
PACS1-203ENST00000524815 SLC26A8Q96RN1 970 aa23.57■■□□□ 1.36
PACS1-203ENST00000524815 EFCAB6Q5THR3 1501 aa23.56■■□□□ 1.36
PACS1-203ENST00000524815 KDM5AP29375 1690 aaKnown RBP23.53■■□□□ 1.36
PACS1-203ENST00000524815 KANK1Q14678 1352 aa23.52■■□□□ 1.36
PACS1-203ENST00000524815 LMTK2Q8IWU2 1503 aa23.5■■□□□ 1.35
PACS1-203ENST00000524815 CROCC2H7BZ55 1655 aa23.5■■□□□ 1.35
PACS1-203ENST00000524815 SLAIN2Q9P270 581 aa23.48■■□□□ 1.35
PACS1-203ENST00000524815 NOS1P29475 1434 aa23.48■■□□□ 1.35
PACS1-203ENST00000524815 NKTRP30414 1462 aaKnown RBP23.48■■□□□ 1.35
PACS1-203ENST00000524815 NWD1Q149M9 1564 aa23.48■■□□□ 1.35
PACS1-203ENST00000524815 DAPK1P53355 1430 aa23.47■■□□□ 1.35
PACS1-203ENST00000524815 PTPN23Q9H3S7 1636 aa23.45■■□□□ 1.34
PACS1-203ENST00000524815 MSH6P52701 1360 aa23.45■■□□□ 1.34
PACS1-203ENST00000524815 LOC105371045A0A1W2PR82 267 aa23.45■■□□□ 1.34
PACS1-203ENST00000524815 ADGRB3O60242 1522 aa23.44■■□□□ 1.34
PACS1-203ENST00000524815 JCADQ9P266 1359 aa23.44■■□□□ 1.34
PACS1-203ENST00000524815 SETD1AO15047 1707 aaKnown RBP23.44■■□□□ 1.34
PACS1-203ENST00000524815 CHIC2Q9UKJ5 165 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms