RNA–Protein interactions for RNA: ENST00000524815.5

PACS1-203, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4 BASIC

Gene PACS1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-203ENST00000524815 NISCHQ9Y2I1 1504 aa38.05■■■■□ 3.68
PACS1-203ENST00000524815 ABCC9O60706 1549 aa34.84■■■■□ 3.17
PACS1-203ENST00000524815 CCDC180Q9P1Z9 1646 aa34.28■■■■□ 3.08
PACS1-203ENST00000524815 DNAJC5BQ9UF47 199 aa33.22■■■□□ 2.91
PACS1-203ENST00000524815 RB1CC1Q8TDY2 1594 aa32.89■■■□□ 2.86
PACS1-203ENST00000524815 NACADO15069 1562 aa32.57■■■□□ 2.8
PACS1-203ENST00000524815 PABPN1Q86U42 306 aaKnown RBP eCLIP32.4■■■□□ 2.78
PACS1-203ENST00000524815 DCAF8L2P0C7V8 631 aa32.34■■■□□ 2.77
PACS1-203ENST00000524815 UNC13AQ9UPW8 1703 aa32.14■■■□□ 2.74
PACS1-203ENST00000524815 BICRAQ9NZM4 1560 aa32.02■■■□□ 2.72
PACS1-203ENST00000524815 MYO15BQ96JP2 1530 aa31.97■■■□□ 2.71
PACS1-203ENST00000524815 SHROOM4Q9ULL8 1493 aa31.46■■■□□ 2.63
PACS1-203ENST00000524815 CC2D2AQ9P2K1 1620 aa31.43■■■□□ 2.62
PACS1-203ENST00000524815 CECR2Q9BXF3 1484 aa31.43■■■□□ 2.62
PACS1-203ENST00000524815 ZCCHC6Q5VYS8 1495 aaKnown RBP31.42■■■□□ 2.62
PACS1-203ENST00000524815 DCAF1Q9Y4B6 1507 aa31.39■■■□□ 2.61
PACS1-203ENST00000524815 SCRIBQ14160 1630 aa31.24■■■□□ 2.59
PACS1-203ENST00000524815 EIF4G1Q04637 1599 aaKnown RBP31.24■■■□□ 2.59
PACS1-203ENST00000524815 DNAJC5Q9H3Z4 198 aa30.81■■■□□ 2.52
PACS1-203ENST00000524815 CUX2O14529 1486 aa30.2■■■□□ 2.43
PACS1-203ENST00000524815 NCAPD3P42695 1498 aa30.12■■■□□ 2.41
PACS1-203ENST00000524815 ERCC6Q03468 1493 aa30.07■■■□□ 2.4
PACS1-203ENST00000524815 ATAD2BQ9ULI0 1458 aa29.95■■■□□ 2.39
PACS1-203ENST00000524815 NESP48681 1621 aa29.81■■■□□ 2.36
PACS1-203ENST00000524815 HMGXB3Q12766 1538 aa29.8■■■□□ 2.36
PACS1-203ENST00000524815 SMARCA2P51531 1590 aa29.78■■■□□ 2.36
PACS1-203ENST00000524815 SMARCA4P51532 1647 aa29.76■■■□□ 2.35
PACS1-203ENST00000524815 BAZ1BQ9UIG0 1483 aaKnown RBP29.6■■■□□ 2.33
PACS1-203ENST00000524815 THOC2Q8NI27 1593 aaKnown RBP29.56■■■□□ 2.32
PACS1-203ENST00000524815 BAZ1AQ9NRL2 1556 aaPredicted RBP29.54■■■□□ 2.32
PACS1-203ENST00000524815 PEG3Q9GZU2 1588 aa29.49■■■□□ 2.31
PACS1-203ENST00000524815 LAMC3Q9Y6N6 1575 aa29.46■■■□□ 2.31
PACS1-203ENST00000524815 KIF21AQ7Z4S6 1674 aa29.34■■■□□ 2.29
PACS1-203ENST00000524815 PDS5BQ9NTI5 1447 aa29.33■■■□□ 2.29
PACS1-203ENST00000524815 MROH2BQ7Z745 1585 aa29.33■■■□□ 2.29
PACS1-203ENST00000524815 TRIM41Q8WV44 630 aa29.22■■■□□ 2.27
PACS1-203ENST00000524815 CADPSQ9ULU8 1353 aa29.18■■■□□ 2.26
PACS1-203ENST00000524815 MRC2Q9UBG0 1479 aa29.1■■■□□ 2.25
PACS1-203ENST00000524815 WDR62O43379 1518 aa29.04■■■□□ 2.24
PACS1-203ENST00000524815 WIZO95785 1651 aa28.93■■■□□ 2.22
PACS1-203ENST00000524815 CEP164Q9UPV0 1460 aa28.87■■■□□ 2.21
PACS1-203ENST00000524815 FANCD2Q9BXW9 1451 aa28.83■■■□□ 2.21
PACS1-203ENST00000524815 OSCARQ8IYS5 282 aa28.78■■■□□ 2.2
PACS1-203ENST00000524815 CFTRP13569 1480 aa28.74■■■□□ 2.19
PACS1-203ENST00000524815 URB2Q14146 1524 aaKnown RBP28.64■■■□□ 2.18
PACS1-203ENST00000524815 RSF1Q96T23 1441 aaPredicted RBP28.55■■■□□ 2.16
PACS1-203ENST00000524815 TOP2AP11388 1531 aaKnown RBP28.52■■■□□ 2.16
PACS1-203ENST00000524815 RIMBP3CA6NJZ7 1639 aa28.43■■■□□ 2.14
PACS1-203ENST00000524815 RIMBP3BA6NNM3 1639 aa28.43■■■□□ 2.14
PACS1-203ENST00000524815 RIMBP3Q9UFD9 1639 aa28.43■■■□□ 2.14
PACS1-203ENST00000524815 ZNF608Q9ULD9 1512 aaPredicted RBP28.38■■■□□ 2.13
PACS1-203ENST00000524815 IFT140Q96RY7 1462 aa28.34■■■□□ 2.13
PACS1-203ENST00000524815 PRDM2Q13029 1718 aa28.3■■■□□ 2.12
PACS1-203ENST00000524815 ARHGEF11O15085 1522 aa28.29■■■□□ 2.12
PACS1-203ENST00000524815 CCDC88BA6NC98 1476 aa28.25■■■□□ 2.11
PACS1-203ENST00000524815 TOPBP1Q92547 1522 aa28.23■■■□□ 2.11
PACS1-203ENST00000524815 CYB5RLQ6IPT4 315 aa28.15■■■□□ 2.1
PACS1-203ENST00000524815 EIF4G3O43432 1585 aaKnown RBP28.13■■■□□ 2.09
PACS1-203ENST00000524815 ABCC8Q09428 1581 aa28.1■■■□□ 2.09
PACS1-203ENST00000524815 AQRO60306 1485 aaKnown RBP eCLIP28.07■■■□□ 2.08
PACS1-203ENST00000524815 DNMBPQ6XZF7 1577 aa28.05■■■□□ 2.08
PACS1-203ENST00000524815 TARBP1Q13395 1621 aaKnown RBP28.01■■■□□ 2.07
PACS1-203ENST00000524815 ARAP1Q96P48 1450 aa28.01■■■□□ 2.07
PACS1-203ENST00000524815 CHD1O14646 1710 aa28.01■■■□□ 2.07
PACS1-203ENST00000524815 TRHP20396 242 aaPredicted RBP27.96■■■□□ 2.07
PACS1-203ENST00000524815 FBLN2P98095 1184 aa27.95■■■□□ 2.06
PACS1-203ENST00000524815 POLA1P09884 1462 aaPredicted RBP27.91■■■□□ 2.06
PACS1-203ENST00000524815 RAD54L2Q9Y4B4 1467 aa27.85■■■□□ 2.05
PACS1-203ENST00000524815 TDRD9Q8NDG6 1382 aaKnown RBP27.82■■■□□ 2.04
PACS1-203ENST00000524815 SOGA1O94964 1423 aa27.79■■■□□ 2.04
PACS1-203ENST00000524815 SNAPC4Q5SXM2 1469 aa27.73■■■□□ 2.03
PACS1-203ENST00000524815 CLASP1Q7Z460 1538 aa27.72■■■□□ 2.03
PACS1-203ENST00000524815 CHMP7Q8WUX9 453 aaPredicted RBP27.67■■■□□ 2.02
PACS1-203ENST00000524815 FGD5Q6ZNL6 1462 aa27.66■■■□□ 2.02
PACS1-203ENST00000524815 WDR97A6NE52 1622 aa27.64■■■□□ 2.02
PACS1-203ENST00000524815 MAGI1Q96QZ7 1491 aaPredicted RBP27.62■■■□□ 2.01
PACS1-203ENST00000524815 SYNJ1O43426 1573 aa27.61■■■□□ 2.01
PACS1-203ENST00000524815 GRIN2BQ13224 1484 aa27.58■■■□□ 2.01
PACS1-203ENST00000524815 CUX1P39880 1505 aa27.57■■■□□ 2
PACS1-203ENST00000524815 SYNJ2O15056 1496 aa27.55■■■□□ 2
PACS1-203ENST00000524815 AEBP2Q6ZN18 517 aaPredicted RBP27.48■■□□□ 1.99
PACS1-203ENST00000524815 GAPVD1Q14C86 1478 aa27.45■■□□□ 1.99
PACS1-203ENST00000524815 PBRM1Q86U86 1689 aa27.39■■□□□ 1.97
PACS1-203ENST00000524815 ABCA10Q8WWZ4 1543 aa27.32■■□□□ 1.96
PACS1-203ENST00000524815 ABCA5Q8WWZ7 1642 aa27.3■■□□□ 1.96
PACS1-203ENST00000524815 ERCC6L2Q5T890 1561 aa27.28■■□□□ 1.96
PACS1-203ENST00000524815 GRIN2AQ12879 1464 aa27.22■■□□□ 1.95
PACS1-203ENST00000524815 NUP160Q12769 1436 aa27.17■■□□□ 1.94
PACS1-203ENST00000524815 CEP170Q5SW79 1584 aa27.16■■□□□ 1.94
PACS1-203ENST00000524815 ADAMTS12P58397 1594 aa27.13■■□□□ 1.93
PACS1-203ENST00000524815 WRNQ14191 1432 aaPredicted RBP eCLIP27.11■■□□□ 1.93
PACS1-203ENST00000524815 SHROOM2Q13796 1616 aa27.08■■□□□ 1.93
PACS1-203ENST00000524815 FHAD1B1AJZ9 1412 aa27.06■■□□□ 1.92
PACS1-203ENST00000524815 TOP2BQ02880 1626 aa26.97■■□□□ 1.91
PACS1-203ENST00000524815 KIF13AQ9H1H9 1805 aa26.97■■□□□ 1.91
PACS1-203ENST00000524815 BIVM-ERCC5R4GMW8 1640 aa26.96■■□□□ 1.91
PACS1-203ENST00000524815 PRG4Q92954 1404 aaPredicted RBP26.95■■□□□ 1.9
PACS1-203ENST00000524815 ERICH3Q5RHP9 1530 aa26.95■■□□□ 1.9
PACS1-203ENST00000524815 SUPT5HO00267 1087 aaKnown RBP26.92■■□□□ 1.9
PACS1-203ENST00000524815 JPH4Q96JJ6 628 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms