RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 NEURL4Q96JN8 1562 aa18.93■□□□□ 0.62
SDCBP-211ENST00000523441 MTUS2Q5JR59 1369 aa18.92■□□□□ 0.62
SDCBP-211ENST00000523441 KIAA1107Q9UPP5 1409 aa18.91■□□□□ 0.62
SDCBP-211ENST00000523441 SHANK2Q9UPX8 1470 aa18.91■□□□□ 0.62
SDCBP-211ENST00000523441 TNRQ92752 1358 aa18.91■□□□□ 0.62
SDCBP-211ENST00000523441 KIF3BO15066 747 aa18.9■□□□□ 0.62
SDCBP-211ENST00000523441 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.9■□□□□ 0.62
SDCBP-211ENST00000523441 CPS1P31327 1500 aa18.9■□□□□ 0.62
SDCBP-211ENST00000523441 TIAM1Q13009 1591 aa18.87■□□□□ 0.61
SDCBP-211ENST00000523441 ANKLE2Q86XL3 938 aa18.86■□□□□ 0.61
SDCBP-211ENST00000523441 WASHC2CQ9Y4E1 1318 aa18.85■□□□□ 0.61
SDCBP-211ENST00000523441 VWDEQ8N2E2 1590 aa18.85■□□□□ 0.61
SDCBP-211ENST00000523441 KDM5DQ9BY66 1539 aa18.83■□□□□ 0.6
SDCBP-211ENST00000523441 DHX29Q7Z478 1369 aaKnown RBP18.82■□□□□ 0.6
SDCBP-211ENST00000523441 UGGT1Q9NYU2 1555 aa18.82■□□□□ 0.6
SDCBP-211ENST00000523441 STRCP1A6NGW2 1772 aa18.82■□□□□ 0.6
SDCBP-211ENST00000523441 NPHP4O75161 1426 aaPredicted RBP18.82■□□□□ 0.6
SDCBP-211ENST00000523441 CFAP65Q6ZU64 1925 aaKnown RBP18.81■□□□□ 0.6
SDCBP-211ENST00000523441 THEMISQ8N1K5 641 aaPredicted RBP18.81■□□□□ 0.6
SDCBP-211ENST00000523441 PZPP20742 1482 aa18.81■□□□□ 0.6
SDCBP-211ENST00000523441 MBD5Q9P267 1494 aa18.81■□□□□ 0.6
SDCBP-211ENST00000523441 IQGAP1P46940 1657 aa18.81■□□□□ 0.6
SDCBP-211ENST00000523441 ALKQ9UM73 1620 aa18.81■□□□□ 0.6
SDCBP-211ENST00000523441 FAM135AQ9P2D6 1515 aa18.79■□□□□ 0.6
SDCBP-211ENST00000523441 EHBP1L1Q8N3D4 1523 aa18.78■□□□□ 0.6
SDCBP-211ENST00000523441 RTEL1-TNFRSF6BF6WH68 1400 aa18.77■□□□□ 0.6
SDCBP-211ENST00000523441 MIA2Q96PC5 1412 aa18.77■□□□□ 0.6
SDCBP-211ENST00000523441 CAMSAP2Q08AD1 1489 aa18.76■□□□□ 0.59
SDCBP-211ENST00000523441 CCDC141Q6ZP82 1450 aa18.76■□□□□ 0.59
SDCBP-211ENST00000523441 DEPDC5O75140 1603 aa18.74■□□□□ 0.59
SDCBP-211ENST00000523441 NLRP1Q9C000 1473 aa18.74■□□□□ 0.59
SDCBP-211ENST00000523441 RNF17Q9BXT8 1623 aaKnown RBP18.74■□□□□ 0.59
SDCBP-211ENST00000523441 LRRC7Q96NW7 1537 aa18.74■□□□□ 0.59
SDCBP-211ENST00000523441 MED14O60244 1454 aa18.71■□□□□ 0.59
SDCBP-211ENST00000523441 CEP152O94986 1710 aa18.7■□□□□ 0.58
SDCBP-211ENST00000523441 SYNMO15061 1565 aa18.69■□□□□ 0.58
SDCBP-211ENST00000523441 CEP162Q5TB80 1403 aa18.69■□□□□ 0.58
SDCBP-211ENST00000523441 NCOA2Q15596 1464 aa18.68■□□□□ 0.58
SDCBP-211ENST00000523441 ZC3H13Q5T200 1668 aaKnown RBP18.67■□□□□ 0.58
SDCBP-211ENST00000523441 TSPY4P0CV99 314 aa18.67■□□□□ 0.58
SDCBP-211ENST00000523441 TSPY10P0CW01 314 aa18.67■□□□□ 0.58
SDCBP-211ENST00000523441 ABCC3O15438 1527 aa18.66■□□□□ 0.58
SDCBP-211ENST00000523441 XIRP1Q702N8 1843 aaKnown RBP18.66■□□□□ 0.58
SDCBP-211ENST00000523441 RGS17Q9UGC6 210 aaPredicted RBP18.66■□□□□ 0.58
SDCBP-211ENST00000523441 UBR1Q8IWV7 1749 aa18.66■□□□□ 0.58
SDCBP-211ENST00000523441 ERVK-7P63135 1459 aa18.64■□□□□ 0.57
SDCBP-211ENST00000523441 ARHGEF5Q12774 1597 aa18.62■□□□□ 0.57
SDCBP-211ENST00000523441 RSPH4AQ5TD94 716 aa18.61■□□□□ 0.57
SDCBP-211ENST00000523441 TXNDC2Q86VQ3 553 aa18.61■□□□□ 0.57
SDCBP-211ENST00000523441 SCAF11Q99590 1463 aaKnown RBP18.6■□□□□ 0.57
SDCBP-211ENST00000523441 LTKP29376 864 aa18.6■□□□□ 0.57
SDCBP-211ENST00000523441 RBM33Q96EV2 1170 aaKnown RBP18.6■□□□□ 0.57
SDCBP-211ENST00000523441 SETD1AO15047 1707 aaKnown RBP18.59■□□□□ 0.57
SDCBP-211ENST00000523441 POTEAQ6S8J7 498 aa18.58■□□□□ 0.56
SDCBP-211ENST00000523441 MROH1Q8NDA8 1641 aa18.56■□□□□ 0.56
SDCBP-211ENST00000523441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.56■□□□□ 0.56
SDCBP-211ENST00000523441 STAG3Q9UJ98 1225 aa18.56■□□□□ 0.56
SDCBP-211ENST00000523441 EIF2AK4Q9P2K8 1649 aaKnown RBP18.56■□□□□ 0.56
SDCBP-211ENST00000523441 EID1Q9Y6B2 187 aa18.55■□□□□ 0.56
SDCBP-211ENST00000523441 ROBO1Q9Y6N7 1651 aa18.54■□□□□ 0.56
SDCBP-211ENST00000523441 PIK3C2BO00750 1634 aa18.54■□□□□ 0.56
SDCBP-211ENST00000523441 MAST1Q9Y2H9 1570 aa18.53■□□□□ 0.56
SDCBP-211ENST00000523441 BCANQ96GW7 911 aa18.51■□□□□ 0.55
SDCBP-211ENST00000523441 PROSER2Q86WR7 435 aaPredicted RBP18.5■□□□□ 0.55
SDCBP-211ENST00000523441 SLC26A8Q96RN1 970 aa18.5■□□□□ 0.55
SDCBP-211ENST00000523441 TMEM94Q12767 1356 aa18.5■□□□□ 0.55
SDCBP-211ENST00000523441 SLIT1O75093 1534 aa18.49■□□□□ 0.55
SDCBP-211ENST00000523441 ARHGAP23Q9P227 1491 aa18.49■□□□□ 0.55
SDCBP-211ENST00000523441 RRP7BPQ9NSQ0 103 aa18.48■□□□□ 0.55
SDCBP-211ENST00000523441 DUOX2Q9NRD8 1548 aa18.47■□□□□ 0.55
SDCBP-211ENST00000523441 FAM135BQ49AJ0 1406 aa18.47■□□□□ 0.55
SDCBP-211ENST00000523441 LRRC9Q6ZRR7 1453 aa18.46■□□□□ 0.55
SDCBP-211ENST00000523441 PHLPP1O60346 1717 aa18.46■□□□□ 0.55
SDCBP-211ENST00000523441 TMEM2Q9UHN6 1383 aa18.44■□□□□ 0.54
SDCBP-211ENST00000523441 KANK4Q5T7N3 995 aaPredicted RBP18.44■□□□□ 0.54
SDCBP-211ENST00000523441 KIF15Q9NS87 1388 aa18.43■□□□□ 0.54
SDCBP-211ENST00000523441 EFCAB6Q5THR3 1501 aa18.43■□□□□ 0.54
SDCBP-211ENST00000523441 PRDM15P57071 1507 aaPredicted RBP18.42■□□□□ 0.54
SDCBP-211ENST00000523441 MAP3K1Q13233 1512 aa18.42■□□□□ 0.54
SDCBP-211ENST00000523441 CROCC2H7BZ55 1655 aa18.41■□□□□ 0.54
SDCBP-211ENST00000523441 KCNA6P17658 529 aa18.41■□□□□ 0.54
SDCBP-211ENST00000523441 MYOM3Q5VTT5 1437 aa18.4■□□□□ 0.54
SDCBP-211ENST00000523441 KANK1Q14678 1352 aa18.4■□□□□ 0.54
SDCBP-211ENST00000523441 IDI1Q13907 227 aa18.39■□□□□ 0.53
SDCBP-211ENST00000523441 TRIM52Q96A61 297 aa18.39■□□□□ 0.53
SDCBP-211ENST00000523441 CHIC2Q9UKJ5 165 aa18.39■□□□□ 0.53
SDCBP-211ENST00000523441 MSH6P52701 1360 aa18.39■□□□□ 0.53
SDCBP-211ENST00000523441 MEX3CQ5U5Q3 659 aaKnown RBP18.38■□□□□ 0.53
SDCBP-211ENST00000523441 ARHGAP31Q2M1Z3 1444 aa18.38■□□□□ 0.53
SDCBP-211ENST00000523441 MYO5BQ9ULV0 1848 aa18.37■□□□□ 0.53
SDCBP-211ENST00000523441 C14orf37Q86TY3 774 aa18.36■□□□□ 0.53
SDCBP-211ENST00000523441 ERBINQ96RT1 1412 aa18.36■□□□□ 0.53
SDCBP-211ENST00000523441 SLAIN2Q9P270 581 aa18.36■□□□□ 0.53
SDCBP-211ENST00000523441 TET3O43151 1660 aa18.35■□□□□ 0.53
SDCBP-211ENST00000523441 VPS8Q8N3P4 1428 aa18.35■□□□□ 0.53
SDCBP-211ENST00000523441 PTPN23Q9H3S7 1636 aa18.34■□□□□ 0.53
SDCBP-211ENST00000523441 JCADQ9P266 1359 aa18.34■□□□□ 0.53
SDCBP-211ENST00000523441 ABCC5O15440 1437 aa18.33■□□□□ 0.53
SDCBP-211ENST00000523441 PPP1R15AO75807 674 aaPredicted RBP18.33■□□□□ 0.52
SDCBP-211ENST00000523441 KDM5AP29375 1690 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms