RNA–Protein interactions for RNA: ENST00000521829.5

VPS37A-210, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS37A, Length 1,307 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-210ENST00000521829 PTPRKQ15262 1439 aa17.09■□□□□ 0.33
VPS37A-210ENST00000521829 WASHC2CQ9Y4E1 1318 aa17.08■□□□□ 0.33
VPS37A-210ENST00000521829 NCOA1Q15788 1441 aa17.08■□□□□ 0.33
VPS37A-210ENST00000521829 MYOM3Q5VTT5 1437 aa17.08■□□□□ 0.33
VPS37A-210ENST00000521829 MIA2Q96PC5 1412 aa17.08■□□□□ 0.33
VPS37A-210ENST00000521829 CAMSAP1Q5T5Y3 1602 aa17.08■□□□□ 0.32
VPS37A-210ENST00000521829 MYO3AQ8NEV4 1616 aa17.06■□□□□ 0.32
VPS37A-210ENST00000521829 NCKAP5LQ9HCH0 1330 aa17.05■□□□□ 0.32
VPS37A-210ENST00000521829 CEP170BQ9Y4F5 1589 aaPredicted RBP17.04■□□□□ 0.32
VPS37A-210ENST00000521829 PKD2Q13563 968 aa17.04■□□□□ 0.32
VPS37A-210ENST00000521829 KDM5DQ9BY66 1539 aa17.04■□□□□ 0.32
VPS37A-210ENST00000521829 FAM135AQ9P2D6 1515 aa17.04■□□□□ 0.32
VPS37A-210ENST00000521829 ZNF142P52746 1687 aaPredicted RBP17.04■□□□□ 0.32
VPS37A-210ENST00000521829 MAST1Q9Y2H9 1570 aa17.03■□□□□ 0.32
VPS37A-210ENST00000521829 FBXO31Q5XUX0 539 aaPredicted RBP17.02■□□□□ 0.32
VPS37A-210ENST00000521829 TNRQ92752 1358 aa17.02■□□□□ 0.31
VPS37A-210ENST00000521829 A2ML1A8K2U0 1454 aa17■□□□□ 0.31
VPS37A-210ENST00000521829 PLA2R1Q13018 1463 aa17■□□□□ 0.31
VPS37A-210ENST00000521829 SPATA31D1Q6ZQQ2 1576 aa17■□□□□ 0.31
VPS37A-210ENST00000521829 PZPP20742 1482 aa16.99■□□□□ 0.31
VPS37A-210ENST00000521829 PTPN23Q9H3S7 1636 aa16.97■□□□□ 0.31
VPS37A-210ENST00000521829 DNMT1P26358 1616 aaKnown RBP16.97■□□□□ 0.31
VPS37A-210ENST00000521829 EIF2AK4Q9P2K8 1649 aaKnown RBP16.97■□□□□ 0.31
VPS37A-210ENST00000521829 DUOX2Q9NRD8 1548 aa16.96■□□□□ 0.31
VPS37A-210ENST00000521829 RNF17Q9BXT8 1623 aaKnown RBP16.96■□□□□ 0.31
VPS37A-210ENST00000521829 RRP7BPQ9NSQ0 103 aa16.96■□□□□ 0.3
VPS37A-210ENST00000521829 THEMISQ8N1K5 641 aaPredicted RBP16.95■□□□□ 0.3
VPS37A-210ENST00000521829 TCOF1Q13428 1488 aaKnown RBP16.94■□□□□ 0.3
VPS37A-210ENST00000521829 LTBP4Q8N2S1 1624 aa16.94■□□□□ 0.3
VPS37A-210ENST00000521829 ZC3H13Q5T200 1668 aaKnown RBP16.94■□□□□ 0.3
VPS37A-210ENST00000521829 ABCC5O15440 1437 aa16.94■□□□□ 0.3
VPS37A-210ENST00000521829 FGD6Q6ZV73 1430 aa16.94■□□□□ 0.3
VPS37A-210ENST00000521829 NLRP1Q9C000 1473 aa16.93■□□□□ 0.3
VPS37A-210ENST00000521829 SHANK2Q9UPX8 1470 aa16.93■□□□□ 0.3
VPS37A-210ENST00000521829 KIF15Q9NS87 1388 aa16.93■□□□□ 0.3
VPS37A-210ENST00000521829 ZNF335Q9H4Z2 1342 aaPredicted RBP16.93■□□□□ 0.3
VPS37A-210ENST00000521829 CROCC2H7BZ55 1655 aa16.92■□□□□ 0.3
VPS37A-210ENST00000521829 ABCC3O15438 1527 aa16.92■□□□□ 0.3
VPS37A-210ENST00000521829 DAPK1P53355 1430 aa16.92■□□□□ 0.3
VPS37A-210ENST00000521829 ANKLE2Q86XL3 938 aa16.92■□□□□ 0.3
VPS37A-210ENST00000521829 IQSEC2Q5JU85 1478 aa16.91■□□□□ 0.3
VPS37A-210ENST00000521829 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.9■□□□□ 0.33e-6■■□□□ 13.8
VPS37A-210ENST00000521829 CHIC2Q9UKJ5 165 aa16.9■□□□□ 0.3
VPS37A-210ENST00000521829 ERBINQ96RT1 1412 aa16.89■□□□□ 0.29
VPS37A-210ENST00000521829 POLR1AO95602 1720 aaPredicted RBP16.89■□□□□ 0.29
VPS37A-210ENST00000521829 ANKRD30AQ9BXX3 1397 aa16.89■□□□□ 0.29
VPS37A-210ENST00000521829 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.89■□□□□ 0.29
VPS37A-210ENST00000521829 UGGT1Q9NYU2 1555 aa16.89■□□□□ 0.29
VPS37A-210ENST00000521829 CEP152O94986 1710 aa16.88■□□□□ 0.29
VPS37A-210ENST00000521829 CFAP65Q6ZU64 1925 aaKnown RBP16.88■□□□□ 0.29
VPS37A-210ENST00000521829 KANK1Q14678 1352 aa16.88■□□□□ 0.29
VPS37A-210ENST00000521829 FAM50AQ14320 339 aaKnown RBP16.88■□□□□ 0.29
VPS37A-210ENST00000521829 MROH1Q8NDA8 1641 aa16.87■□□□□ 0.29
VPS37A-210ENST00000521829 ERVK-7P63135 1459 aa16.86■□□□□ 0.29
VPS37A-210ENST00000521829 UBAP1LF5GYI3 381 aa16.84■□□□□ 0.29
VPS37A-210ENST00000521829 PRDM15P57071 1507 aaPredicted RBP16.83■□□□□ 0.28
VPS37A-210ENST00000521829 NEURL4Q96JN8 1562 aa16.83■□□□□ 0.28
VPS37A-210ENST00000521829 NPHP4O75161 1426 aaPredicted RBP16.81■□□□□ 0.28
VPS37A-210ENST00000521829 ARHGAP31Q2M1Z3 1444 aa16.81■□□□□ 0.28
VPS37A-210ENST00000521829 DEPDC5O75140 1603 aa16.81■□□□□ 0.28
VPS37A-210ENST00000521829 MED14O60244 1454 aa16.79■□□□□ 0.28
VPS37A-210ENST00000521829 STAG3Q9UJ98 1225 aa16.79■□□□□ 0.28
VPS37A-210ENST00000521829 CPS1P31327 1500 aa16.79■□□□□ 0.28
VPS37A-210ENST00000521829 IQGAP1P46940 1657 aa16.77■□□□□ 0.28
VPS37A-210ENST00000521829 UBR1Q8IWV7 1749 aa16.77■□□□□ 0.28
VPS37A-210ENST00000521829 ADGRL2O95490 1459 aa16.77■□□□□ 0.27
VPS37A-210ENST00000521829 TXNDC2Q86VQ3 553 aa16.76■□□□□ 0.27
VPS37A-210ENST00000521829 EID1Q9Y6B2 187 aa16.76■□□□□ 0.27
VPS37A-210ENST00000521829 TOM1O60784 492 aa16.75■□□□□ 0.27
VPS37A-210ENST00000521829 SCAF1Q9H7N4 1312 aaKnown RBP16.74■□□□□ 0.27
VPS37A-210ENST00000521829 ANKRD50Q9ULJ7 1429 aa16.74■□□□□ 0.27
VPS37A-210ENST00000521829 LMTK2Q8IWU2 1503 aa16.73■□□□□ 0.27
VPS37A-210ENST00000521829 VWDEQ8N2E2 1590 aa16.73■□□□□ 0.27
VPS37A-210ENST00000521829 SCAF11Q99590 1463 aaKnown RBP16.73■□□□□ 0.27
VPS37A-210ENST00000521829 MSH5O43196 834 aa16.72■□□□□ 0.27
VPS37A-210ENST00000521829 PIP4K2BP78356 416 aa16.72■□□□□ 0.27
VPS37A-210ENST00000521829 PIK3C2BO00750 1634 aa16.71■□□□□ 0.27
VPS37A-210ENST00000521829 LTKP29376 864 aa16.7■□□□□ 0.26
VPS37A-210ENST00000521829 IDI1Q13907 227 aa16.7■□□□□ 0.26
VPS37A-210ENST00000521829 SLIT1O75093 1534 aa16.7■□□□□ 0.26
VPS37A-210ENST00000521829 EFCAB6Q5THR3 1501 aa16.69■□□□□ 0.26
VPS37A-210ENST00000521829 PPARGC1BQ86YN6 1023 aaKnown RBP16.69■□□□□ 0.26
VPS37A-210ENST00000521829 SLC52A1Q9NWF4 448 aa16.69■□□□□ 0.26
VPS37A-210ENST00000521829 ARHGAP23Q9P227 1491 aa16.69■□□□□ 0.26
VPS37A-210ENST00000521829 TMEM2Q9UHN6 1383 aa16.69■□□□□ 0.26
VPS37A-210ENST00000521829 ITGAEP38570 1179 aa16.68■□□□□ 0.26
VPS37A-210ENST00000521829 KDM5AP29375 1690 aaKnown RBP16.66■□□□□ 0.26
VPS37A-210ENST00000521829 NOS1P29475 1434 aa16.66■□□□□ 0.26
VPS37A-210ENST00000521829 ROCK1Q13464 1354 aa16.66■□□□□ 0.26
VPS37A-210ENST00000521829 RPRD2Q5VT52 1461 aaKnown RBP16.65■□□□□ 0.26
VPS37A-210ENST00000521829 BCANQ96GW7 911 aa16.65■□□□□ 0.26
VPS37A-210ENST00000521829 SYNMO15061 1565 aa16.65■□□□□ 0.26
VPS37A-210ENST00000521829 STRCP1A6NGW2 1772 aa16.64■□□□□ 0.25
VPS37A-210ENST00000521829 TET3O43151 1660 aa16.63■□□□□ 0.25
VPS37A-210ENST00000521829 LRRC7Q96NW7 1537 aa16.63■□□□□ 0.25
VPS37A-210ENST00000521829 HSPA1LP34931 641 aa16.63■□□□□ 0.25
VPS37A-210ENST00000521829 HDGFP51858 240 aaKnown RBP16.63■□□□□ 0.25
VPS37A-210ENST00000521829 ADGRB3O60242 1522 aa16.61■□□□□ 0.25
VPS37A-210ENST00000521829 GCC2Q8IWJ2 1684 aa16.61■□□□□ 0.25
VPS37A-210ENST00000521829 UNC13BO14795 1591 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms