RNA–Protein interactions for RNA: ENST00000521829.5

VPS37A-210, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS37A, Length 1,307 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-210ENST00000521829 NISCHQ9Y2I1 1504 aa26.94■■□□□ 1.9
VPS37A-210ENST00000521829 CCDC180Q9P1Z9 1646 aa24.13■■□□□ 1.45
VPS37A-210ENST00000521829 ABCC9O60706 1549 aa24.03■■□□□ 1.44
VPS37A-210ENST00000521829 RB1CC1Q8TDY2 1594 aa22.94■■□□□ 1.26
VPS37A-210ENST00000521829 DCAF8L2P0C7V8 631 aa22.82■■□□□ 1.24
VPS37A-210ENST00000521829 NACADO15069 1562 aa22.8■■□□□ 1.24
VPS37A-210ENST00000521829 DNAJC5BQ9UF47 199 aa22.58■■□□□ 1.21
VPS37A-210ENST00000521829 MYO15BQ96JP2 1530 aa22.49■■□□□ 1.19
VPS37A-210ENST00000521829 PABPN1Q86U42 306 aaKnown RBP eCLIP22.41■■□□□ 1.18
VPS37A-210ENST00000521829 UNC13AQ9UPW8 1703 aa22.38■■□□□ 1.17
VPS37A-210ENST00000521829 ZCCHC6Q5VYS8 1495 aaKnown RBP22.33■■□□□ 1.16
VPS37A-210ENST00000521829 DCAF1Q9Y4B6 1507 aa22.25■■□□□ 1.15
VPS37A-210ENST00000521829 BICRAQ9NZM4 1560 aa22.19■■□□□ 1.14
VPS37A-210ENST00000521829 AEBP2Q6ZN18 517 aaPredicted RBP22.08■■□□□ 1.13
VPS37A-210ENST00000521829 SCRIBQ14160 1630 aa22■■□□□ 1.11
VPS37A-210ENST00000521829 SHROOM4Q9ULL8 1493 aa21.95■■□□□ 1.1
VPS37A-210ENST00000521829 CC2D2AQ9P2K1 1620 aa21.7■■□□□ 1.06
VPS37A-210ENST00000521829 EIF4G1Q04637 1599 aaKnown RBP21.67■■□□□ 1.06
VPS37A-210ENST00000521829 CECR2Q9BXF3 1484 aa21.63■■□□□ 1.05
VPS37A-210ENST00000521829 DNAJC5Q9H3Z4 198 aa21.5■■□□□ 1.03
VPS37A-210ENST00000521829 NCAPD3P42695 1498 aa21.03■□□□□ 0.96
VPS37A-210ENST00000521829 SMARCA4P51532 1647 aa20.99■□□□□ 0.95
VPS37A-210ENST00000521829 ATAD2BQ9ULI0 1458 aa20.98■□□□□ 0.95
VPS37A-210ENST00000521829 SMARCA2P51531 1590 aa20.96■□□□□ 0.95
VPS37A-210ENST00000521829 BAZ1AQ9NRL2 1556 aaPredicted RBP20.92■□□□□ 0.94
VPS37A-210ENST00000521829 HMGXB3Q12766 1538 aa20.88■□□□□ 0.93
VPS37A-210ENST00000521829 BAZ1BQ9UIG0 1483 aaKnown RBP20.82■□□□□ 0.92
VPS37A-210ENST00000521829 ERCC6Q03468 1493 aa20.79■□□□□ 0.92
VPS37A-210ENST00000521829 PEG3Q9GZU2 1588 aa20.77■□□□□ 0.92
VPS37A-210ENST00000521829 MROH2BQ7Z745 1585 aa20.74■□□□□ 0.91
VPS37A-210ENST00000521829 CUX2O14529 1486 aa20.66■□□□□ 0.9
VPS37A-210ENST00000521829 NESP48681 1621 aa20.64■□□□□ 0.89
VPS37A-210ENST00000521829 CHIC1Q5VXU3 224 aa20.59■□□□□ 0.89
VPS37A-210ENST00000521829 LAMC3Q9Y6N6 1575 aa20.56■□□□□ 0.88
VPS37A-210ENST00000521829 WIZO95785 1651 aa20.52■□□□□ 0.88
VPS37A-210ENST00000521829 PDS5BQ9NTI5 1447 aa20.47■□□□□ 0.87
VPS37A-210ENST00000521829 CADPSQ9ULU8 1353 aa20.42■□□□□ 0.86
VPS37A-210ENST00000521829 KIF21AQ7Z4S6 1674 aa20.4■□□□□ 0.86
VPS37A-210ENST00000521829 THOC2Q8NI27 1593 aaKnown RBP20.39■□□□□ 0.86
VPS37A-210ENST00000521829 RSF1Q96T23 1441 aaPredicted RBP20.37■□□□□ 0.85
VPS37A-210ENST00000521829 TRIM41Q8WV44 630 aa20.27■□□□□ 0.84
VPS37A-210ENST00000521829 TOP2AP11388 1531 aaKnown RBP20.27■□□□□ 0.84
VPS37A-210ENST00000521829 MRC2Q9UBG0 1479 aa20.25■□□□□ 0.83
VPS37A-210ENST00000521829 CEP164Q9UPV0 1460 aa20.21■□□□□ 0.83
VPS37A-210ENST00000521829 CFTRP13569 1480 aa20.19■□□□□ 0.82
VPS37A-210ENST00000521829 FANCD2Q9BXW9 1451 aa20.18■□□□□ 0.82
VPS37A-210ENST00000521829 WDR62O43379 1518 aa20.17■□□□□ 0.82
VPS37A-210ENST00000521829 CCDC88BA6NC98 1476 aa20.05■□□□□ 0.8
VPS37A-210ENST00000521829 PRDM2Q13029 1718 aa20.02■□□□□ 0.8
VPS37A-210ENST00000521829 URB2Q14146 1524 aaKnown RBP19.98■□□□□ 0.79
VPS37A-210ENST00000521829 ABCC8Q09428 1581 aa19.82■□□□□ 0.76
VPS37A-210ENST00000521829 OSCARQ8IYS5 282 aa19.8■□□□□ 0.76
VPS37A-210ENST00000521829 TOPBP1Q92547 1522 aa19.8■□□□□ 0.76
VPS37A-210ENST00000521829 IFT140Q96RY7 1462 aa19.8■□□□□ 0.76
VPS37A-210ENST00000521829 DNMBPQ6XZF7 1577 aa19.75■□□□□ 0.75
VPS37A-210ENST00000521829 ZNF608Q9ULD9 1512 aaPredicted RBP19.71■□□□□ 0.75
VPS37A-210ENST00000521829 SUPT5HO00267 1087 aaKnown RBP19.66■□□□□ 0.74
VPS37A-210ENST00000521829 EIF4G3O43432 1585 aaKnown RBP19.61■□□□□ 0.73
VPS37A-210ENST00000521829 POLA1P09884 1462 aaPredicted RBP19.6■□□□□ 0.73
VPS37A-210ENST00000521829 TARBP1Q13395 1621 aaKnown RBP19.59■□□□□ 0.73
VPS37A-210ENST00000521829 AQRO60306 1485 aaKnown RBP eCLIP19.58■□□□□ 0.73
VPS37A-210ENST00000521829 SOGA1O94964 1423 aa19.57■□□□□ 0.72
VPS37A-210ENST00000521829 RAD54L2Q9Y4B4 1467 aa19.53■□□□□ 0.72
VPS37A-210ENST00000521829 FBLN2P98095 1184 aa19.51■□□□□ 0.71
VPS37A-210ENST00000521829 FGD5Q6ZNL6 1462 aa19.51■□□□□ 0.71
VPS37A-210ENST00000521829 TDRD9Q8NDG6 1382 aaKnown RBP19.49■□□□□ 0.71
VPS37A-210ENST00000521829 CUX1P39880 1505 aa19.49■□□□□ 0.71
VPS37A-210ENST00000521829 CHD1O14646 1710 aa19.47■□□□□ 0.71
VPS37A-210ENST00000521829 RIMBP3CA6NJZ7 1639 aa19.46■□□□□ 0.71
VPS37A-210ENST00000521829 RIMBP3BA6NNM3 1639 aa19.46■□□□□ 0.71
VPS37A-210ENST00000521829 RIMBP3Q9UFD9 1639 aa19.46■□□□□ 0.71
VPS37A-210ENST00000521829 WDR97A6NE52 1622 aa19.44■□□□□ 0.7
VPS37A-210ENST00000521829 ARHGEF11O15085 1522 aa19.4■□□□□ 0.7
VPS37A-210ENST00000521829 SNAPC4Q5SXM2 1469 aa19.38■□□□□ 0.69
VPS37A-210ENST00000521829 CHMP7Q8WUX9 453 aaPredicted RBP19.38■□□□□ 0.69
VPS37A-210ENST00000521829 GRIN2BQ13224 1484 aa19.36■□□□□ 0.69
VPS37A-210ENST00000521829 TRHP20396 242 aaPredicted RBP19.36■□□□□ 0.69
VPS37A-210ENST00000521829 MAGI1Q96QZ7 1491 aaPredicted RBP19.35■□□□□ 0.69
VPS37A-210ENST00000521829 CYB5RLQ6IPT4 315 aa19.33■□□□□ 0.69
VPS37A-210ENST00000521829 GAPVD1Q14C86 1478 aa19.31■□□□□ 0.68
VPS37A-210ENST00000521829 ABCA10Q8WWZ4 1543 aa19.28■□□□□ 0.68
VPS37A-210ENST00000521829 SYNJ2O15056 1496 aa19.28■□□□□ 0.68
VPS37A-210ENST00000521829 PBRM1Q86U86 1689 aa19.28■□□□□ 0.68
VPS37A-210ENST00000521829 WRNQ14191 1432 aaPredicted RBP eCLIP19.28■□□□□ 0.68
VPS37A-210ENST00000521829 SYNJ1O43426 1573 aa19.27■□□□□ 0.68
VPS37A-210ENST00000521829 ABCA5Q8WWZ7 1642 aa19.23■□□□□ 0.67
VPS37A-210ENST00000521829 TOP2BQ02880 1626 aa19.22■□□□□ 0.67
VPS37A-210ENST00000521829 BIVM-ERCC5R4GMW8 1640 aa19.21■□□□□ 0.67
VPS37A-210ENST00000521829 CLASP1Q7Z460 1538 aa19.21■□□□□ 0.67
VPS37A-210ENST00000521829 ARAP1Q96P48 1450 aa19.21■□□□□ 0.67
VPS37A-210ENST00000521829 GRIN2AQ12879 1464 aa19.09■□□□□ 0.65
VPS37A-210ENST00000521829 ADAMTS12P58397 1594 aa19.08■□□□□ 0.64
VPS37A-210ENST00000521829 FHAD1B1AJZ9 1412 aa19.07■□□□□ 0.64
VPS37A-210ENST00000521829 ERICH3Q5RHP9 1530 aa19.06■□□□□ 0.64
VPS37A-210ENST00000521829 NUP160Q12769 1436 aa19.01■□□□□ 0.63
VPS37A-210ENST00000521829 CEP170Q5SW79 1584 aa19■□□□□ 0.63
VPS37A-210ENST00000521829 ERCC6L2Q5T890 1561 aa18.91■□□□□ 0.62
VPS37A-210ENST00000521829 SHROOM2Q13796 1616 aa18.91■□□□□ 0.62
VPS37A-210ENST00000521829 KIF27Q86VH2 1401 aa18.9■□□□□ 0.62
VPS37A-210ENST00000521829 JPH4Q96JJ6 628 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms