RNA–Protein interactions for RNA: ENST00000521434.5

MRPS28-207, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5 BASIC

Gene MRPS28, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-207ENST00000521434 DNMT1P26358 1616 aaKnown RBP14.62□□□□□ -0.07
MRPS28-207ENST00000521434 PLEKHH2Q8IVE3 1493 aa14.62□□□□□ -0.07
MRPS28-207ENST00000521434 ADGBQ8N7X0 1667 aa14.61□□□□□ -0.07
MRPS28-207ENST00000521434 TOM1O60784 492 aa14.61□□□□□ -0.07
MRPS28-207ENST00000521434 A2ML1A8K2U0 1454 aa14.61□□□□□ -0.07
MRPS28-207ENST00000521434 CPS1P31327 1500 aa14.61□□□□□ -0.07
MRPS28-207ENST00000521434 PIP4K2BP78356 416 aa14.6□□□□□ -0.07
MRPS28-207ENST00000521434 FYCO1Q9BQS8 1478 aa14.6□□□□□ -0.07
MRPS28-207ENST00000521434 SHANK2Q9UPX8 1470 aa14.57□□□□□ -0.08
MRPS28-207ENST00000521434 NEURL4Q96JN8 1562 aa14.57□□□□□ -0.08
MRPS28-207ENST00000521434 CFDP1Q9UEE9 299 aaPredicted RBP14.57□□□□□ -0.08
MRPS28-207ENST00000521434 CCNB3Q8WWL7 1395 aa14.54□□□□□ -0.08
MRPS28-207ENST00000521434 VWDEQ8N2E2 1590 aa14.52□□□□□ -0.08
MRPS28-207ENST00000521434 TNRQ92752 1358 aa14.52□□□□□ -0.08
MRPS28-207ENST00000521434 ANKLE2Q86XL3 938 aa14.51□□□□□ -0.09
MRPS28-207ENST00000521434 ALKQ9UM73 1620 aa14.51□□□□□ -0.09
MRPS28-207ENST00000521434 PZPP20742 1482 aa14.5□□□□□ -0.09
MRPS28-207ENST00000521434 FBXO31Q5XUX0 539 aaPredicted RBP14.5□□□□□ -0.09
MRPS28-207ENST00000521434 DEPDC5O75140 1603 aa14.5□□□□□ -0.09
MRPS28-207ENST00000521434 FAM135AQ9P2D6 1515 aa14.5□□□□□ -0.09
MRPS28-207ENST00000521434 RTEL1-TNFRSF6BF6WH68 1400 aa14.49□□□□□ -0.09
MRPS28-207ENST00000521434 DHX29Q7Z478 1369 aaKnown RBP14.49□□□□□ -0.09
MRPS28-207ENST00000521434 KDM5DQ9BY66 1539 aa14.49□□□□□ -0.09
MRPS28-207ENST00000521434 MBD5Q9P267 1494 aa14.49□□□□□ -0.09
MRPS28-207ENST00000521434 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.48□□□□□ -0.09
MRPS28-207ENST00000521434 THEMISQ8N1K5 641 aaPredicted RBP14.48□□□□□ -0.09
MRPS28-207ENST00000521434 MED14O60244 1454 aa14.48□□□□□ -0.09
MRPS28-207ENST00000521434 MTUS2Q5JR59 1369 aa14.47□□□□□ -0.09
MRPS28-207ENST00000521434 ZNF644Q9H582 1327 aaPredicted RBP14.47□□□□□ -0.09
MRPS28-207ENST00000521434 IQGAP1P46940 1657 aa14.47□□□□□ -0.09
MRPS28-207ENST00000521434 NLRP1Q9C000 1473 aa14.47□□□□□ -0.09
MRPS28-207ENST00000521434 NPHP4O75161 1426 aaPredicted RBP14.47□□□□□ -0.09
MRPS28-207ENST00000521434 TIAM1Q13009 1591 aa14.47□□□□□ -0.09
MRPS28-207ENST00000521434 UGGT1Q9NYU2 1555 aa14.47□□□□□ -0.09
MRPS28-207ENST00000521434 KIF3BO15066 747 aa14.46□□□□□ -0.09
MRPS28-207ENST00000521434 NPM3O75607 178 aaKnown RBP14.46□□□□□ -0.09
MRPS28-207ENST00000521434 STRCP1A6NGW2 1772 aa14.46□□□□□ -0.09
MRPS28-207ENST00000521434 MIA2Q96PC5 1412 aa14.45□□□□□ -0.1
MRPS28-207ENST00000521434 RNF17Q9BXT8 1623 aaKnown RBP14.44□□□□□ -0.1
MRPS28-207ENST00000521434 WASHC2CQ9Y4E1 1318 aa14.44□□□□□ -0.1
MRPS28-207ENST00000521434 SYNMO15061 1565 aa14.43□□□□□ -0.1
MRPS28-207ENST00000521434 LRRC7Q96NW7 1537 aa14.42□□□□□ -0.1
MRPS28-207ENST00000521434 EHBP1L1Q8N3D4 1523 aa14.41□□□□□ -0.1
MRPS28-207ENST00000521434 CCDC141Q6ZP82 1450 aa14.41□□□□□ -0.1
MRPS28-207ENST00000521434 CEP162Q5TB80 1403 aa14.39□□□□□ -0.11
MRPS28-207ENST00000521434 RSPH4AQ5TD94 716 aa14.38□□□□□ -0.11
MRPS28-207ENST00000521434 CFAP65Q6ZU64 1925 aaKnown RBP14.38□□□□□ -0.11
MRPS28-207ENST00000521434 ZC3H13Q5T200 1668 aaKnown RBP14.38□□□□□ -0.11
MRPS28-207ENST00000521434 RNF216Q9NWF9 866 aaPredicted RBP14.37□□□□□ -0.11
MRPS28-207ENST00000521434 RGS17Q9UGC6 210 aaPredicted RBP14.37□□□□□ -0.11
MRPS28-207ENST00000521434 CAMSAP2Q08AD1 1489 aa14.37□□□□□ -0.11
MRPS28-207ENST00000521434 XIRP1Q702N8 1843 aaKnown RBP14.36□□□□□ -0.11
MRPS28-207ENST00000521434 UBR1Q8IWV7 1749 aa14.35□□□□□ -0.11
MRPS28-207ENST00000521434 ABCC3O15438 1527 aa14.34□□□□□ -0.11
MRPS28-207ENST00000521434 ARHGEF5Q12774 1597 aa14.34□□□□□ -0.11
MRPS28-207ENST00000521434 ERVK-7P63135 1459 aa14.32□□□□□ -0.12
MRPS28-207ENST00000521434 SCAF11Q99590 1463 aaKnown RBP14.32□□□□□ -0.12
MRPS28-207ENST00000521434 TSPY4P0CV99 314 aa14.32□□□□□ -0.12
MRPS28-207ENST00000521434 TSPY10P0CW01 314 aa14.32□□□□□ -0.12
MRPS28-207ENST00000521434 HOXD11P31277 338 aaPredicted RBP14.32□□□□□ -0.12
MRPS28-207ENST00000521434 NCOA2Q15596 1464 aa14.31□□□□□ -0.12
MRPS28-207ENST00000521434 EIF2AK4Q9P2K8 1649 aaKnown RBP14.3□□□□□ -0.12
MRPS28-207ENST00000521434 CEP152O94986 1710 aa14.3□□□□□ -0.12
MRPS28-207ENST00000521434 SLIT1O75093 1534 aa14.29□□□□□ -0.12
MRPS28-207ENST00000521434 FAM135BQ49AJ0 1406 aa14.28□□□□□ -0.12
MRPS28-207ENST00000521434 MROH1Q8NDA8 1641 aa14.28□□□□□ -0.12
MRPS28-207ENST00000521434 ARHGAP23Q9P227 1491 aa14.28□□□□□ -0.12
MRPS28-207ENST00000521434 MAST1Q9Y2H9 1570 aa14.27□□□□□ -0.12
MRPS28-207ENST00000521434 LTKP29376 864 aa14.27□□□□□ -0.13
MRPS28-207ENST00000521434 POTEAQ6S8J7 498 aa14.27□□□□□ -0.13
MRPS28-207ENST00000521434 TXNDC2Q86VQ3 553 aa14.27□□□□□ -0.13
MRPS28-207ENST00000521434 ROBO1Q9Y6N7 1651 aa14.24□□□□□ -0.13
MRPS28-207ENST00000521434 EID1Q9Y6B2 187 aa14.24□□□□□ -0.13
MRPS28-207ENST00000521434 SETD1AO15047 1707 aaKnown RBP14.21□□□□□ -0.13
MRPS28-207ENST00000521434 PIK3C2BO00750 1634 aa14.21□□□□□ -0.13
MRPS28-207ENST00000521434 ARHGAP31Q2M1Z3 1444 aa14.21□□□□□ -0.13
MRPS28-207ENST00000521434 TMEM94Q12767 1356 aa14.21□□□□□ -0.14
MRPS28-207ENST00000521434 KDM5AP29375 1690 aaKnown RBP14.2□□□□□ -0.14
MRPS28-207ENST00000521434 TMEM2Q9UHN6 1383 aa14.2□□□□□ -0.14
MRPS28-207ENST00000521434 DUOX2Q9NRD8 1548 aa14.2□□□□□ -0.14
MRPS28-207ENST00000521434 LRRC9Q6ZRR7 1453 aa14.19□□□□□ -0.14
MRPS28-207ENST00000521434 CACNB1Q02641 598 aaPredicted RBP14.19□□□□□ -0.14
MRPS28-207ENST00000521434 PRDM15P57071 1507 aaPredicted RBP14.19□□□□□ -0.14
MRPS28-207ENST00000521434 MAP3K1Q13233 1512 aa14.19□□□□□ -0.14
MRPS28-207ENST00000521434 KCNA6P17658 529 aa14.18□□□□□ -0.14
MRPS28-207ENST00000521434 STAG3Q9UJ98 1225 aa14.17□□□□□ -0.14
MRPS28-207ENST00000521434 PHLPP1O60346 1717 aa14.17□□□□□ -0.14
MRPS28-207ENST00000521434 EFCAB6Q5THR3 1501 aa14.16□□□□□ -0.14
MRPS28-207ENST00000521434 PROSER2Q86WR7 435 aaPredicted RBP14.16□□□□□ -0.14
MRPS28-207ENST00000521434 TET3O43151 1660 aa14.16□□□□□ -0.14
MRPS28-207ENST00000521434 NWD1Q149M9 1564 aa14.14□□□□□ -0.15
MRPS28-207ENST00000521434 NKTRP30414 1462 aaKnown RBP14.14□□□□□ -0.15
MRPS28-207ENST00000521434 MYOM3Q5VTT5 1437 aa14.14□□□□□ -0.15
MRPS28-207ENST00000521434 MSH6P52701 1360 aa14.13□□□□□ -0.15
MRPS28-207ENST00000521434 KIF15Q9NS87 1388 aa14.13□□□□□ -0.15
MRPS28-207ENST00000521434 JCADQ9P266 1359 aa14.13□□□□□ -0.15
MRPS28-207ENST00000521434 DCAF8L1A6NGE4 600 aa14.13□□□□□ -0.15
MRPS28-207ENST00000521434 RBM33Q96EV2 1170 aaKnown RBP14.13□□□□□ -0.15
MRPS28-207ENST00000521434 SLC26A8Q96RN1 970 aa14.13□□□□□ -0.15
MRPS28-207ENST00000521434 ERBINQ96RT1 1412 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms