RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 MAP3K1Q13233 1512 aa18.87■□□□□ 0.61
POLB-208ENST00000520008 RSPH4AQ5TD94 716 aa18.87■□□□□ 0.61
POLB-208ENST00000520008 MAST1Q9Y2H9 1570 aa18.86■□□□□ 0.61
POLB-208ENST00000520008 A2ML1A8K2U0 1454 aa18.86■□□□□ 0.61
POLB-208ENST00000520008 PZPP20742 1482 aa18.85■□□□□ 0.61
POLB-208ENST00000520008 NCKAP5LQ9HCH0 1330 aa18.83■□□□□ 0.61
POLB-208ENST00000520008 RNF17Q9BXT8 1623 aaKnown RBP18.83■□□□□ 0.61
POLB-208ENST00000520008 PKD2Q13563 968 aa18.82■□□□□ 0.6
POLB-208ENST00000520008 KIF3BO15066 747 aa18.81■□□□□ 0.6
POLB-208ENST00000520008 NEURL4Q96JN8 1562 aa18.81■□□□□ 0.6
POLB-208ENST00000520008 POLR1AO95602 1720 aaPredicted RBP18.8■□□□□ 0.6
POLB-208ENST00000520008 EIF2AK4Q9P2K8 1649 aaKnown RBP18.8■□□□□ 0.6
POLB-208ENST00000520008 ZC3H13Q5T200 1668 aaKnown RBP18.79■□□□□ 0.6
POLB-208ENST00000520008 LOC105371045A0A1W2PR82 267 aa18.79■□□□□ 0.6
POLB-208ENST00000520008 MIA2Q96PC5 1412 aa18.79■□□□□ 0.6
POLB-208ENST00000520008 TNRQ92752 1358 aa18.79■□□□□ 0.6
POLB-208ENST00000520008 ZNF335Q9H4Z2 1342 aaPredicted RBP18.78■□□□□ 0.6
POLB-208ENST00000520008 MYOM3Q5VTT5 1437 aa18.78■□□□□ 0.6
POLB-208ENST00000520008 MROH1Q8NDA8 1641 aa18.78■□□□□ 0.6
POLB-208ENST00000520008 KANK4Q5T7N3 995 aaPredicted RBP18.77■□□□□ 0.6
POLB-208ENST00000520008 FBXO31Q5XUX0 539 aaPredicted RBP18.76■□□□□ 0.59
POLB-208ENST00000520008 ABCC3O15438 1527 aa18.75■□□□□ 0.59
POLB-208ENST00000520008 TSPY4P0CV99 314 aa18.75■□□□□ 0.59
POLB-208ENST00000520008 TSPY10P0CW01 314 aa18.75■□□□□ 0.59
POLB-208ENST00000520008 NLRP1Q9C000 1473 aa18.75■□□□□ 0.59
POLB-208ENST00000520008 WASHC2CQ9Y4E1 1318 aa18.74■□□□□ 0.59
POLB-208ENST00000520008 SPATA31D1Q6ZQQ2 1576 aa18.74■□□□□ 0.59
POLB-208ENST00000520008 CROCC2H7BZ55 1655 aa18.73■□□□□ 0.59
POLB-208ENST00000520008 UGGT1Q9NYU2 1555 aa18.72■□□□□ 0.59
POLB-208ENST00000520008 DEPDC5O75140 1603 aa18.71■□□□□ 0.59
POLB-208ENST00000520008 SHANK2Q9UPX8 1470 aa18.7■□□□□ 0.58
POLB-208ENST00000520008 DUOX2Q9NRD8 1548 aa18.69■□□□□ 0.58
POLB-208ENST00000520008 MED14O60244 1454 aa18.69■□□□□ 0.58
POLB-208ENST00000520008 PRDM15P57071 1507 aaPredicted RBP18.69■□□□□ 0.58
POLB-208ENST00000520008 CEP152O94986 1710 aa18.69■□□□□ 0.58
POLB-208ENST00000520008 ERVK-7P63135 1459 aa18.68■□□□□ 0.58
POLB-208ENST00000520008 VWDEQ8N2E2 1590 aa18.68■□□□□ 0.58
POLB-208ENST00000520008 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.68■□□□□ 0.58
POLB-208ENST00000520008 CPS1P31327 1500 aa18.67■□□□□ 0.58
POLB-208ENST00000520008 PTPN23Q9H3S7 1636 aa18.67■□□□□ 0.58
POLB-208ENST00000520008 DISP3Q9P2K9 1392 aa18.65■□□□□ 0.58
POLB-208ENST00000520008 ABCC5O15440 1437 aa18.65■□□□□ 0.58
POLB-208ENST00000520008 IQGAP1P46940 1657 aa18.64■□□□□ 0.57
POLB-208ENST00000520008 ERBINQ96RT1 1412 aa18.64■□□□□ 0.57
POLB-208ENST00000520008 UBR1Q8IWV7 1749 aa18.63■□□□□ 0.57
POLB-208ENST00000520008 THEMISQ8N1K5 641 aaPredicted RBP18.63■□□□□ 0.57
POLB-208ENST00000520008 NPHP4O75161 1426 aaPredicted RBP18.62■□□□□ 0.57
POLB-208ENST00000520008 DAPK1P53355 1430 aa18.61■□□□□ 0.57
POLB-208ENST00000520008 ARHGAP31Q2M1Z3 1444 aa18.61■□□□□ 0.57
POLB-208ENST00000520008 KIF15Q9NS87 1388 aa18.61■□□□□ 0.57
POLB-208ENST00000520008 UBAP1LF5GYI3 381 aa18.61■□□□□ 0.57
POLB-208ENST00000520008 ANKLE2Q86XL3 938 aa18.61■□□□□ 0.57
POLB-208ENST00000520008 FGD6Q6ZV73 1430 aa18.6■□□□□ 0.57
POLB-208ENST00000520008 ILDR2Q71H61 639 aa18.6■□□□□ 0.57
POLB-208ENST00000520008 ALKQ9UM73 1620 aa18.59■□□□□ 0.57
POLB-208ENST00000520008 STRCP1A6NGW2 1772 aa18.58■□□□□ 0.57
POLB-208ENST00000520008 ARHGAP23Q9P227 1491 aa18.57■□□□□ 0.56
POLB-208ENST00000520008 SLIT1O75093 1534 aa18.56■□□□□ 0.56
POLB-208ENST00000520008 SYNMO15061 1565 aa18.55■□□□□ 0.56
POLB-208ENST00000520008 LMTK2Q8IWU2 1503 aa18.55■□□□□ 0.56
POLB-208ENST00000520008 FOXD1Q16676 465 aa18.55■□□□□ 0.56
POLB-208ENST00000520008 CFAP65Q6ZU64 1925 aaKnown RBP18.55■□□□□ 0.56
POLB-208ENST00000520008 KDM5AP29375 1690 aaKnown RBP18.53■□□□□ 0.56
POLB-208ENST00000520008 PIK3C2BO00750 1634 aa18.52■□□□□ 0.56
POLB-208ENST00000520008 SCAF11Q99590 1463 aaKnown RBP18.52■□□□□ 0.56
POLB-208ENST00000520008 RRP7BPQ9NSQ0 103 aa18.52■□□□□ 0.56
POLB-208ENST00000520008 ADGRL2O95490 1459 aa18.52■□□□□ 0.55
POLB-208ENST00000520008 LRRC7Q96NW7 1537 aa18.51■□□□□ 0.55
POLB-208ENST00000520008 APLP2Q06481 763 aa18.51■□□□□ 0.55
POLB-208ENST00000520008 ANKRD30AQ9BXX3 1397 aa18.49■□□□□ 0.55
POLB-208ENST00000520008 EFCAB6Q5THR3 1501 aa18.49■□□□□ 0.55
POLB-208ENST00000520008 SOCS7O14512 581 aa18.48■□□□□ 0.55
POLB-208ENST00000520008 TOM1O60784 492 aa18.48■□□□□ 0.55
POLB-208ENST00000520008 LTKP29376 864 aa18.46■□□□□ 0.55
POLB-208ENST00000520008 HSPA1LP34931 641 aa18.46■□□□□ 0.55
POLB-208ENST00000520008 KANK1Q14678 1352 aa18.45■□□□□ 0.54
POLB-208ENST00000520008 NOS1P29475 1434 aa18.45■□□□□ 0.54
POLB-208ENST00000520008 MED1Q15648 1581 aaPredicted RBP18.45■□□□□ 0.54
POLB-208ENST00000520008 XIRP1Q702N8 1843 aaKnown RBP18.44■□□□□ 0.54
POLB-208ENST00000520008 TMEM2Q9UHN6 1383 aa18.44■□□□□ 0.54
POLB-208ENST00000520008 PIP4K2BP78356 416 aa18.43■□□□□ 0.54
POLB-208ENST00000520008 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.43■□□□□ 0.54
POLB-208ENST00000520008 CHIC2Q9UKJ5 165 aa18.43■□□□□ 0.54
POLB-208ENST00000520008 ADGRB3O60242 1522 aa18.42■□□□□ 0.54
POLB-208ENST00000520008 TXNDC2Q86VQ3 553 aa18.41■□□□□ 0.54
POLB-208ENST00000520008 SCAF1Q9H7N4 1312 aaKnown RBP18.41■□□□□ 0.54
POLB-208ENST00000520008 TET3O43151 1660 aa18.4■□□□□ 0.54
POLB-208ENST00000520008 RPRD2Q5VT52 1461 aaKnown RBP18.39■□□□□ 0.54
POLB-208ENST00000520008 ANKRD50Q9ULJ7 1429 aa18.39■□□□□ 0.53
POLB-208ENST00000520008 IDI1Q13907 227 aa18.38■□□□□ 0.53
POLB-208ENST00000520008 UNC13BO14795 1591 aa18.38■□□□□ 0.53
POLB-208ENST00000520008 EID1Q9Y6B2 187 aa18.36■□□□□ 0.53
POLB-208ENST00000520008 GCC2Q8IWJ2 1684 aa18.35■□□□□ 0.53
POLB-208ENST00000520008 NWD1Q149M9 1564 aa18.35■□□□□ 0.53
POLB-208ENST00000520008 FAM50AQ14320 339 aaKnown RBP18.32■□□□□ 0.52
POLB-208ENST00000520008 MYO5BQ9ULV0 1848 aa18.32■□□□□ 0.52
POLB-208ENST00000520008 ZFYVE9O95405 1425 aa18.32■□□□□ 0.52
POLB-208ENST00000520008 TMEM131LA2VDJ0 1609 aa18.31■□□□□ 0.52
POLB-208ENST00000520008 SLC52A1Q9NWF4 448 aa18.31■□□□□ 0.52
POLB-208ENST00000520008 STAG3Q9UJ98 1225 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms