RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 CAMSAP2Q08AD1 1489 aa28.6■■■□□ 2.17
TFF3-204ENST00000518498 FBXO31Q5XUX0 539 aaPredicted RBP28.6■■■□□ 2.17
TFF3-204ENST00000518498 WASHC2CQ9Y4E1 1318 aa28.6■■■□□ 2.17
TFF3-204ENST00000518498 A2ML1A8K2U0 1454 aa28.59■■■□□ 2.17
TFF3-204ENST00000518498 UBAP1LF5GYI3 381 aa28.57■■■□□ 2.16
TFF3-204ENST00000518498 ILDR2Q71H61 639 aa28.56■■■□□ 2.16
TFF3-204ENST00000518498 TNRQ92752 1358 aa28.55■■■□□ 2.16
TFF3-204ENST00000518498 DNMT1P26358 1616 aaKnown RBP28.54■■■□□ 2.16
TFF3-204ENST00000518498 KDM5DQ9BY66 1539 aa28.52■■■□□ 2.16
TFF3-204ENST00000518498 PZPP20742 1482 aa28.51■■■□□ 2.15
TFF3-204ENST00000518498 ARHGEF5Q12774 1597 aa28.5■■■□□ 2.15
TFF3-204ENST00000518498 FAM135AQ9P2D6 1515 aa28.5■■■□□ 2.15
TFF3-204ENST00000518498 THEMISQ8N1K5 641 aaPredicted RBP28.48■■■□□ 2.15
TFF3-204ENST00000518498 LRRC9Q6ZRR7 1453 aa28.47■■■□□ 2.15
TFF3-204ENST00000518498 ANKLE2Q86XL3 938 aa28.47■■■□□ 2.15
TFF3-204ENST00000518498 VPS8Q8N3P4 1428 aa28.46■■■□□ 2.15
TFF3-204ENST00000518498 MIA2Q96PC5 1412 aa28.46■■■□□ 2.15
TFF3-204ENST00000518498 SOCS7O14512 581 aa28.44■■■□□ 2.14
TFF3-204ENST00000518498 SPATA31D1Q6ZQQ2 1576 aa28.42■■■□□ 2.14
TFF3-204ENST00000518498 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.42■■■□□ 2.14
TFF3-204ENST00000518498 KANK4Q5T7N3 995 aaPredicted RBP28.42■■■□□ 2.14
TFF3-204ENST00000518498 NLRP1Q9C000 1473 aa28.4■■■□□ 2.14
TFF3-204ENST00000518498 POLR1AO95602 1720 aaPredicted RBP28.38■■■□□ 2.13
TFF3-204ENST00000518498 NEURL4Q96JN8 1562 aa28.37■■■□□ 2.13
TFF3-204ENST00000518498 UGGT1Q9NYU2 1555 aa28.37■■■□□ 2.13
TFF3-204ENST00000518498 SHANK2Q9UPX8 1470 aa28.36■■■□□ 2.13
TFF3-204ENST00000518498 MAST1Q9Y2H9 1570 aa28.36■■■□□ 2.13
TFF3-204ENST00000518498 MAP3K1Q13233 1512 aa28.35■■■□□ 2.13
TFF3-204ENST00000518498 TOM1O60784 492 aa28.35■■■□□ 2.13
TFF3-204ENST00000518498 CPS1P31327 1500 aa28.34■■■□□ 2.13
TFF3-204ENST00000518498 SCAF1Q9H7N4 1312 aaKnown RBP28.33■■■□□ 2.13
TFF3-204ENST00000518498 MYOM3Q5VTT5 1437 aa28.32■■■□□ 2.12
TFF3-204ENST00000518498 RNF17Q9BXT8 1623 aaKnown RBP28.32■■■□□ 2.12
TFF3-204ENST00000518498 PIP4K2BP78356 416 aa28.31■■■□□ 2.12
TFF3-204ENST00000518498 NPHP4O75161 1426 aaPredicted RBP28.31■■■□□ 2.12
TFF3-204ENST00000518498 ABCC3O15438 1527 aa28.3■■■□□ 2.12
TFF3-204ENST00000518498 MED14O60244 1454 aa28.29■■■□□ 2.12
TFF3-204ENST00000518498 EIF2AK4Q9P2K8 1649 aaKnown RBP28.28■■■□□ 2.12
TFF3-204ENST00000518498 ZC3H13Q5T200 1668 aaKnown RBP28.27■■■□□ 2.12
TFF3-204ENST00000518498 DEPDC5O75140 1603 aa28.27■■■□□ 2.12
TFF3-204ENST00000518498 HSPA1LP34931 641 aa28.25■■■□□ 2.11
TFF3-204ENST00000518498 VWDEQ8N2E2 1590 aa28.24■■■□□ 2.11
TFF3-204ENST00000518498 APLP2Q06481 763 aa28.24■■■□□ 2.11
TFF3-204ENST00000518498 DUOX2Q9NRD8 1548 aa28.23■■■□□ 2.11
TFF3-204ENST00000518498 ERVK-7P63135 1459 aa28.23■■■□□ 2.11
TFF3-204ENST00000518498 RRP7BPQ9NSQ0 103 aa28.21■■■□□ 2.11
TFF3-204ENST00000518498 MROH1Q8NDA8 1641 aa28.21■■■□□ 2.11
TFF3-204ENST00000518498 KIF15Q9NS87 1388 aa28.18■■■□□ 2.1
TFF3-204ENST00000518498 IQGAP1P46940 1657 aa28.18■■■□□ 2.1
TFF3-204ENST00000518498 CEP152O94986 1710 aa28.17■■■□□ 2.1
TFF3-204ENST00000518498 ABCC5O15440 1437 aa28.17■■■□□ 2.1
TFF3-204ENST00000518498 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.16■■■□□ 2.1
TFF3-204ENST00000518498 CFAP65Q6ZU64 1925 aaKnown RBP28.15■■■□□ 2.1
TFF3-204ENST00000518498 TXNDC2Q86VQ3 553 aa28.13■■■□□ 2.09
TFF3-204ENST00000518498 ARHGAP31Q2M1Z3 1444 aa28.12■■■□□ 2.09
TFF3-204ENST00000518498 ERBINQ96RT1 1412 aa28.12■■■□□ 2.09
TFF3-204ENST00000518498 LTKP29376 864 aa28.11■■■□□ 2.09
TFF3-204ENST00000518498 UBR1Q8IWV7 1749 aa28.11■■■□□ 2.09
TFF3-204ENST00000518498 PTPN23Q9H3S7 1636 aa28.1■■■□□ 2.09
TFF3-204ENST00000518498 LRRC7Q96NW7 1537 aa28.09■■■□□ 2.09
TFF3-204ENST00000518498 EID1Q9Y6B2 187 aa28.09■■■□□ 2.09
TFF3-204ENST00000518498 KANK1Q14678 1352 aa28.09■■■□□ 2.09
TFF3-204ENST00000518498 DAPK1P53355 1430 aa28.09■■■□□ 2.09
TFF3-204ENST00000518498 SCAF11Q99590 1463 aaKnown RBP28.08■■■□□ 2.09
TFF3-204ENST00000518498 PRDM15P57071 1507 aaPredicted RBP28.08■■■□□ 2.08
TFF3-204ENST00000518498 STRCP1A6NGW2 1772 aa28.06■■■□□ 2.08
TFF3-204ENST00000518498 STAG3Q9UJ98 1225 aa28.06■■■□□ 2.08
TFF3-204ENST00000518498 CHIC2Q9UKJ5 165 aa28.06■■■□□ 2.08
TFF3-204ENST00000518498 CROCC2H7BZ55 1655 aa28.06■■■□□ 2.08
TFF3-204ENST00000518498 ALKQ9UM73 1620 aa28.04■■■□□ 2.08
TFF3-204ENST00000518498 SLIT1O75093 1534 aa28.04■■■□□ 2.08
TFF3-204ENST00000518498 ARHGAP23Q9P227 1491 aa28.04■■■□□ 2.08
TFF3-204ENST00000518498 FGD6Q6ZV73 1430 aa28.04■■■□□ 2.08
TFF3-204ENST00000518498 ANKRD30AQ9BXX3 1397 aa28.03■■■□□ 2.08
TFF3-204ENST00000518498 MED1Q15648 1581 aaPredicted RBP28.03■■■□□ 2.08
TFF3-204ENST00000518498 SENP3Q9H4L4 574 aaPredicted RBP28■■■□□ 2.07
TFF3-204ENST00000518498 SYNMO15061 1565 aa27.99■■■□□ 2.07
TFF3-204ENST00000518498 IDI1Q13907 227 aa27.99■■■□□ 2.07
TFF3-204ENST00000518498 TMEM2Q9UHN6 1383 aa27.99■■■□□ 2.07
TFF3-204ENST00000518498 PIK3C2BO00750 1634 aa27.96■■■□□ 2.07
TFF3-204ENST00000518498 PHF23Q9BUL5 403 aaPredicted RBP27.96■■■□□ 2.07
TFF3-204ENST00000518498 LMTK2Q8IWU2 1503 aa27.93■■■□□ 2.06
TFF3-204ENST00000518498 EFCAB6Q5THR3 1501 aa27.9■■■□□ 2.06
TFF3-204ENST00000518498 FAM50AQ14320 339 aaKnown RBP27.89■■■□□ 2.06
TFF3-204ENST00000518498 SLC52A1Q9NWF4 448 aa27.88■■■□□ 2.05
TFF3-204ENST00000518498 KDM5AP29375 1690 aaKnown RBP27.87■■■□□ 2.05
TFF3-204ENST00000518498 KCNA6P17658 529 aa27.87■■■□□ 2.05
TFF3-204ENST00000518498 SLC26A8Q96RN1 970 aa27.87■■■□□ 2.05
TFF3-204ENST00000518498 NOS1P29475 1434 aa27.85■■■□□ 2.05
TFF3-204ENST00000518498 ADGRL2O95490 1459 aa27.84■■■□□ 2.05
TFF3-204ENST00000518498 PROSER2Q86WR7 435 aaPredicted RBP27.83■■■□□ 2.05
TFF3-204ENST00000518498 BCANQ96GW7 911 aa27.83■■■□□ 2.05
TFF3-204ENST00000518498 XIRP1Q702N8 1843 aaKnown RBP27.83■■■□□ 2.05
TFF3-204ENST00000518498 TMEM94Q12767 1356 aa27.82■■■□□ 2.04
TFF3-204ENST00000518498 TET3O43151 1660 aa27.81■■■□□ 2.04
TFF3-204ENST00000518498 ANKRD50Q9ULJ7 1429 aa27.8■■■□□ 2.04
TFF3-204ENST00000518498 FAM135BQ49AJ0 1406 aa27.79■■■□□ 2.04
TFF3-204ENST00000518498 HDGFP51858 240 aaKnown RBP27.77■■■□□ 2.04
TFF3-204ENST00000518498 RBM33Q96EV2 1170 aaKnown RBP27.77■■■□□ 2.04
TFF3-204ENST00000518498 ADGRB3O60242 1522 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms